Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g22104 Brassica carinata HOM05D003839 ORTHO05D003352 2.0e-103 379.0 180 100.0
BcaC03g15184 Brassica carinata HOM05D003839 ORTHO05D003352 8.7e-99 363.6 198 89.4
BcaC06g33695 Brassica carinata HOM05D003839 ORTHO05D003352 7.3e-98 360.5 199 87.9
C03p63060 Brassica napus HOM05D003839 ORTHO05D003352 8.1e-97 357.1 199 87.4
BolC8t48491H Brassica oleracea HOM05D003839 ORTHO05D003352 3.4e-95 351.7 199 86.4
BcaC05g27601 Brassica carinata HOM05D003839 ORTHO05D003352 2.9e-94 348.6 199 86.4
C05p35870 Brassica napus HOM05D003839 ORTHO05D003352 2.9e-94 348.6 199 86.4
C05p53340 Brassica napus HOM05D003839 ORTHO05D003352 8.4e-94 347.1 199 86.4
BraA02t07902Z Brassica rapa HOM05D003839 ORTHO05D003352 2.4e-93 345.5 199 85.4
BcaC06g36011 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-92 343.2 188 89.4
BolC5t32306H Brassica oleracea HOM05D003839 ORTHO05D003352 1.6e-92 342.8 199 84.9
BcaC05g29109 Brassica carinata HOM05D003839 ORTHO05D003352 2.7e-92 342.0 199 85.4
C05p53370 Brassica napus HOM05D003839 ORTHO05D003352 2.7e-92 342.0 199 85.4
A02p28670 Brassica napus HOM05D003839 ORTHO05D003352 2.3e-91 339.0 199 84.4
BolC5t34007H Brassica oleracea HOM05D003839 ORTHO05D003352 1.8e-88 329.3 199 82.4
C02p27640 Brassica napus HOM05D003839 ORTHO05D003352 9.0e-88 327.0 182 87.4
BolC9t57767H Brassica oleracea HOM05D003839 ORTHO05D003352 7.6e-87 323.9 184 87.5
BcaC09g50233 Brassica carinata HOM05D003839 ORTHO05D003352 4.2e-85 318.2 199 80.4
BolC2t09048H Brassica oleracea HOM05D003839 ORTHO05D003352 1.2e-84 316.6 184 85.3
C02p27160 Brassica napus HOM05D003839 ORTHO05D003352 2.9e-78 295.4 169 86.4
A05p21290 Brassica napus HOM05D003839 ORTHO05D003352 6.0e-76 287.7 197 74.1
BraA05t21037Z Brassica rapa HOM05D003839 ORTHO05D003352 6.0e-76 287.7 197 74.1
C09p23320 Brassica napus HOM05D003839 ORTHO05D003352 3.4e-71 271.9 151 86.8
C03p63070 Brassica napus HOM05D003839 ORTHO05D003352 1.1e-69 266.9 151 85.4
BcaB07g32710 Brassica carinata HOM05D003839 ORTHO05D003352 1.8e-67 259.6 196 66.8
BolC6t38134H Brassica oleracea HOM05D003839 ORTHO05D003352 5.7e-66 254.6 199 65.8
C04p41030 Brassica napus HOM05D003839 ORTHO05D003352 6.3e-65 251.1 199 62.8
BolC4t25686H Brassica oleracea HOM05D003839 ORTHO05D003352 6.3e-65 251.1 199 62.8
BraA01t02837Z Brassica rapa HOM05D003839 ORTHO05D003352 7.7e-63 244.2 156 78.8
BcaB01g01517 Brassica carinata HOM05D003839 ORTHO05D003352 1.0e-62 243.8 198 63.6
BraA01t02749Z Brassica rapa HOM05D003839 ORTHO05D003352 1.3e-62 243.4 196 63.8
BcaB08g35818 Brassica carinata HOM05D003839 ORTHO05D003352 9.4e-61 237.3 199 60.8
C09p49180 Brassica napus HOM05D003839 ORTHO05D003352 6.1e-60 234.6 153 75.2
A05p21770 Brassica napus HOM05D003839 ORTHO05D003352 1.3e-57 226.9 141 80.9
BraA05t21098Z Brassica rapa HOM05D003839 ORTHO05D003352 1.3e-57 226.9 141 80.9
BcaB05g23505 Brassica carinata HOM05D003839 ORTHO05D003352 1.3e-54 216.9 196 56.1
BcaB04g18348 Brassica carinata HOM05D003839 ORTHO05D003352 4.2e-53 211.8 200 54.0
BcaB06g26196 Brassica carinata HOM05D003839 ORTHO05D003352 6.1e-52 208.0 200 53.0
BcaB03g16839 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-50 203.8 198 55.6
BcaB01g01663 Brassica carinata HOM05D003839 ORTHO05D003352 2.0e-50 203.0 200 51.5
BcaB07g32949 Brassica carinata HOM05D003839 ORTHO05D003352 2.6e-50 202.6 198 55.6
BcaB06g27258 Brassica carinata HOM05D003839 ORTHO05D003352 7.4e-50 201.1 198 55.6
BcaB04g17113 Brassica carinata HOM05D003839 ORTHO05D003352 3.7e-49 198.7 198 54.5
BcaB02g06777 Brassica carinata HOM05D003839 ORTHO05D003352 6.3e-49 198.0 200 51.0
BraA01t03014Z Brassica rapa HOM05D003839 ORTHO05D003352 3.5e-47 192.2 170 59.4
BcaB01g02875 Brassica carinata HOM05D003839 ORTHO05D003352 4.5e-47 191.8 198 53.0
BcaB07g32609 Brassica carinata HOM05D003839 ORTHO05D003352 4.5e-47 191.8 193 54.4
A05p17610 Brassica napus HOM05D003839 ORTHO05D003352 1.9e-45 186.4 163 60.1
BcaB01g00514 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-44 183.7 149 60.4
BcaB01g00721 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-44 183.7 183 55.2
BcaB02g07569 Brassica carinata HOM05D003839 ORTHO05D003352 5.9e-39 164.9 152 54.6
BcaB06g26804 Brassica carinata HOM05D003839 ORTHO05D003352 1.9e-37 159.8 148 58.8
BcaB04g17572 Brassica carinata HOM05D003839 ORTHO05D003352 5.5e-37 158.3 134 61.9
BcaC07g38083 Brassica carinata HOM05D003839 ORTHO05D003352 3.6e-36 155.6 78 96.2
BcaB03g16489 Brassica carinata HOM05D003839 ORTHO05D003352 2.3e-35 152.9 151 54.3
BcaC03g17189 Brassica carinata HOM05D003839 ORTHO05D003352 4.4e-34 148.7 149 55.7
BraA08t34532Z Brassica rapa HOM05D003839 ORTHO05D003352 1.8e-32 143.3 183 41.5
A04p07260 Brassica napus HOM05D003839 ORTHO05D003352 7.2e-29 131.3 120 59.2
BraA04t16421Z Brassica rapa HOM05D003839 ORTHO05D003352 7.2e-29 131.3 120 59.2
BcaC03g16634 Brassica carinata HOM05D003839 ORTHO05D003352 2.8e-28 129.4 198 35.4
BcaC03g15389 Brassica carinata HOM05D003839 ORTHO05D003352 2.3e-27 126.3 198 34.8
BcaC03g17190 Brassica carinata HOM05D003839 ORTHO05D003352 2.3e-27 126.3 126 57.1
BcaB05g23330 Brassica carinata HOM05D003839 ORTHO05D003352 6.8e-27 124.8 121 57.9
BolC7t43565H Brassica oleracea HOM05D003839 ORTHO05D003352 6.8e-27 124.8 198 34.8
A05p03580 Brassica napus HOM05D003839 ORTHO05D003352 2.6e-26 122.9 173 39.3
BcaC01g02162 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-25 119.8 160 34.4
A09p32650 Brassica napus HOM05D003839 ORTHO05D003352 2.8e-25 119.4 120 55.8
BcaB05g23784 Brassica carinata HOM05D003839 ORTHO05D003352 3.7e-25 119.0 96 60.4
Thhalv10002164m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.7e-22 110.2 147 37.4
A03p67260 Brassica napus HOM05D003839 ORTHO05D003352 2.9e-22 109.4 77 72.7
BcaC05g27209 Brassica carinata HOM05D003839 ORTHO05D003352 1.9e-21 106.7 59 88.1
Thhalv10005441m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 9.5e-21 104.4 163 33.7
BcaC06g35172 Brassica carinata HOM05D003839 ORTHO05D003352 1.6e-20 103.6 59 86.4
BcaC02g10611 Brassica carinata HOM05D003839 ORTHO05D003352 3.6e-20 102.4 127 44.9
BolC2t11209H Brassica oleracea HOM05D003839 ORTHO05D003352 4.7e-20 102.1 90 61.1
C09p21410 Brassica napus HOM05D003839 ORTHO05D003352 6.1e-20 101.7 160 33.1
A05p20350 Brassica napus HOM05D003839 ORTHO05D003352 8.0e-20 101.3 77 70.1
BraA07t28801Z Brassica rapa HOM05D003839 ORTHO05D003352 5.2e-19 98.6 160 32.5
A09p20270 Brassica napus HOM05D003839 ORTHO05D003352 8.9e-19 97.8 160 32.5
BcaB01g00779 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-18 97.1 81 59.3
BcaB08g35221 Brassica carinata HOM05D003839 ORTHO05D003352 2.6e-18 96.3 160 29.4
Thhalv10005434m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 2.6e-18 96.3 158 30.4
BraA02t07568Z Brassica rapa HOM05D008292 ORTHO05D003352 3.4e-18 95.9 123 40.7
BcaB02g06630 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-17 93.2 173 30.6
BraA02t07279Z Brassica rapa HOM05D003839 ORTHO05D003352 3.7e-17 92.4 134 36.6
BcaB05g24307 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-16 90.9 160 30.6
A09p19700 Brassica napus HOM05D003839 ORTHO05D003352 1.4e-16 90.5 144 34.0
C06p50270 Brassica napus HOM05D003839 ORTHO05D003352 1.8e-16 90.1 160 28.8
BolC3t20345H Brassica oleracea HOM05D003839 ORTHO05D003352 1.8e-16 90.1 136 33.8
BcaB07g31374 Brassica carinata HOM05D003839 ORTHO05D003352 2.4e-16 89.7 139 32.4
C04p33340 Brassica napus HOM05D003839 ORTHO05D003352 2.4e-16 89.7 160 28.8
BolC8t51019H Brassica oleracea HOM05D003839 ORTHO05D003352 4.1e-16 89.0 133 37.6
BraA09t40513Z Brassica rapa HOM05D003839 ORTHO05D003352 4.1e-16 89.0 145 33.8
C02p24590 Brassica napus HOM05D003839 ORTHO05D003352 5.4e-16 88.6 144 36.1
A03p67960 Brassica napus HOM05D003839 ORTHO05D003352 7.0e-16 88.2 144 33.3
BcaB05g23319 Brassica carinata HOM05D003839 ORTHO05D003352 2.0e-15 86.7 71 60.6
BcaB06g27469 Brassica carinata HOM05D003839 ORTHO05D003352 2.0e-15 86.7 72 58.3
C08p34220 Brassica napus HOM05D003839 ORTHO05D003352 2.0e-15 86.7 133 37.6
BraA01t01719Z Brassica rapa HOM05D003839 ORTHO05D003352 1.7e-14 83.6 85 43.5
BcaB08g35819 Brassica carinata HOM05D003839 ORTHO05D003352 8.6e-14 81.3 66 62.1
BcaB06g26117 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-13 80.9 94 44.7
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-13 80.9 176 25.6
BolC5t32063H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-13 80.9 176 25.6
BcaB01g00717 Brassica carinata HOM05D003839 ORTHO05D003352 1.9e-13 80.1 65 61.5
BolC9t55562H Brassica oleracea HOM05D009411 ORTHO05D014997 5.6e-13 78.6 136 30.1
C02p44490 Brassica napus HOM05D003839 ORTHO05D003352 9.5e-13 77.8 132 31.8
C09p33270 Brassica napus HOM05D008292 ORTHO05D003352 9.5e-13 77.8 143 28.0
BolC9t56163H Brassica oleracea HOM05D008292 ORTHO05D003352 9.5e-13 77.8 143 28.0
AL8G28420 Arabidopsis lyrata HOM05D003839 ORTHO05D003352 1.2e-12 77.4 165 25.5
BcaB04g17804 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-12 77.4 94 35.1
A01p17040 Brassica napus HOM05D008292 ORTHO05D003352 1.6e-12 77.0 143 29.4
A01p36380 Brassica napus HOM05D003839 ORTHO05D003352 1.6e-12 77.0 176 26.1
BraA09t39508Z Brassica rapa HOM05D008292 ORTHO05D003352 1.6e-12 77.0 143 29.4
C05p17950 Brassica napus HOM05D003839 ORTHO05D003352 2.1e-12 76.6 147 27.9
BcaC04g21847 Brassica carinata HOM05D009411 ORTHO05D014997 2.8e-12 76.3 135 29.6
C04p18360 Brassica napus HOM05D003839 ORTHO05D003352 3.6e-12 75.9 82 40.2
C07p34600 Brassica napus HOM05D009411 ORTHO05D014997 3.6e-12 75.9 135 29.6
C09p26700 Brassica napus HOM05D009411 ORTHO05D014997 3.6e-12 75.9 135 29.6
BolC7t43992H Brassica oleracea HOM05D009411 ORTHO05D014997 3.6e-12 75.9 135 29.6
C04p25750 Brassica napus HOM05D003839 ORTHO05D003352 4.7e-12 75.5 100 42.0
AT5G17167 Arabidopsis thaliana HOM05D003839 ORTHO05D003352 6.2e-12 75.1 178 23.6
BolC4t24234H Brassica oleracea HOM05D003839 ORTHO05D003352 1.4e-11 73.9 100 41.0
C03p49680 Brassica napus HOM05D009411 ORTHO05D014997 1.8e-11 73.6 135 28.9
BolC3t17266H Brassica oleracea HOM05D009411 ORTHO05D014997 1.8e-11 73.6 135 28.9
Thhalv10003316m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 2.3e-11 73.2 134 32.8
AL4G17890 Arabidopsis lyrata HOM05D003839 ORTHO05D003352 3.1e-11 72.8 166 24.7
BcaB07g31055 Brassica carinata HOM05D003839 ORTHO05D003352 4.0e-11 72.4 83 48.2
BcaB05g23095 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-10 70.5 58 62.1
C07p08430 Brassica napus HOM05D008292 ORTHO05D003352 1.5e-10 70.5 192 23.4
A09p13700 Brassica napus HOM05D009411 ORTHO05D014997 2.0e-10 70.1 95 32.6
A09p47020 Brassica napus HOM05D009411 ORTHO05D014997 2.0e-10 70.1 95 32.6
BraA09t40167Z Brassica rapa HOM05D009411 ORTHO05D014997 2.0e-10 70.1 95 32.6
C03p32250 Brassica napus HOM05D008292 ORTHO05D003352 2.6e-10 69.7 156 24.4
BolC5t34000H Brassica oleracea HOM05D003839 ORTHO05D003352 4.4e-10 68.9 61 62.3
BcaB07g30584 Brassica carinata HOM05D003839 ORTHO05D003352 5.8e-10 68.6 70 51.4
BcaB04g17896 Brassica carinata HOM05D003839 ORTHO05D003352 7.5e-10 68.2 132 31.8
BcaC06g36055 Brassica carinata HOM05D008292 ORTHO05D003352 7.5e-10 68.2 149 24.2
A06p31440 Brassica napus HOM05D008292 ORTHO05D003352 7.5e-10 68.2 147 26.5
A09p40840 Brassica napus HOM05D008292 ORTHO05D003352 7.5e-10 68.2 147 26.5
C03p67990 Brassica napus HOM05D003839 ORTHO05D003352 7.5e-10 68.2 89 37.1
Thhalv10002269m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 9.8e-10 67.8 103 32.0
BcaC07g37358 Brassica carinata HOM05D003839 ORTHO05D003352 1.7e-09 67.0 83 42.2
C08p08050 Brassica napus HOM05D003839 ORTHO05D003352 1.7e-09 67.0 83 42.2
BcaC08g43741 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-09 66.6 56 51.8
BcaB06g27608 Brassica carinata HOM05D003839 ORTHO05D021732 2.9e-09 66.2 77 35.1
BcaC09g48196 Brassica carinata HOM05D003839 ORTHO05D039488 3.7e-09 65.9 57 52.6
C06p24070 Brassica napus HOM05D018430 ORTHO05D020143 3.7e-09 65.9 115 32.2
BolC1t05291H Brassica oleracea HOM05D003839 ORTHO05D039488 3.7e-09 65.9 57 52.6
Thhalv10003388m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 3.7e-09 65.9 94 38.3
BcaC05g25843 Brassica carinata HOM05D003839 ORTHO05D003352 4.9e-09 65.5 130 26.9
A03p53820 Brassica napus HOM05D000943 ORTHO05D002475 6.4e-09 65.1 176 23.3
C05p17980 Brassica napus HOM05D008292 ORTHO05D003352 8.3e-09 64.7 90 34.4
BcaC05g25845 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-08 63.9 77 33.8
BcaNung02469 Brassica carinata HOM05D003839 ORTHO05D003352 2.4e-08 63.2 153 26.1
C07p40670 Brassica napus HOM05D003839 ORTHO05D003352 2.4e-08 63.2 153 26.1
BolC1t05558H Brassica oleracea HOM05D009411 ORTHO05D014997 3.2e-08 62.8 123 29.3
BolC1t03162H Brassica oleracea HOM05D003839 ORTHO05D003352 4.1e-08 62.4 78 44.9
BcaC09g48414 Brassica carinata HOM05D003839 ORTHO05D003352 9.2e-08 61.2 77 42.9
BcaB01g00999 Brassica carinata HOM05D008292 ORTHO05D003352 1.6e-07 60.5 150 24.0
C01p50050 Brassica napus HOM05D003839 ORTHO05D003352 1.6e-07 60.5 73 42.5
A03p53810 Brassica napus HOM05D000357 ORTHO05D000242 2.0e-07 60.1 114 28.1
BolC6t37922H Brassica oleracea HOM05D009411 ORTHO05D014997 2.7e-07 59.7 95 28.4
BraA05t20816Z Brassica rapa HOM05D003839 ORTHO05D020172 2.7e-07 59.7 80 42.5
C02p40950 Brassica napus HOM05D003839 ORTHO05D003352 3.5e-07 59.3 65 38.5
C02p51180 Brassica napus HOM05D003839 ORTHO05D003352 6.0e-07 58.5 55 60.0
C03p75260 Brassica napus HOM05D017666 ORTHO05D042826 1.0e-06 57.8 55 54.5
BolC3t19786H Brassica oleracea HOM05D017666 ORTHO05D042826 1.0e-06 57.8 55 54.5
BolC5t34095H Brassica oleracea HOM05D017666 ORTHO05D033272 1.0e-06 57.8 55 54.5
BolC3t19025H Brassica oleracea HOM05D003839 ORTHO05D003352 1.3e-06 57.4 73 37.0
C02p23500 Brassica napus HOM05D010997 ORTHO05D014498 1.7e-06 57.0 131 27.5
C03p91870 Brassica napus HOM05D003839 ORTHO05D003352 1.7e-06 57.0 94 30.9
C05p54280 Brassica napus HOM05D017666 ORTHO05D033272 1.7e-06 57.0 55 54.5
BolC3t21507H Brassica oleracea HOM05D003839 ORTHO05D003352 1.7e-06 57.0 94 30.9
BraA01t02030Z Brassica rapa HOM05D035072 ORTHO05D003352 3.0e-06 56.2 64 43.8
Thhalv10002917m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 3.0e-06 56.2 107 29.0
BolC6t35618H Brassica oleracea HOM05D003839 ORTHO05D003352 3.9e-06 55.8 97 33.0
BolC4t26684H Brassica oleracea HOM05D038493 ORTHO05D033817 5.0e-06 55.5 30 90.0
BraA03t15418Z Brassica rapa HOM05D017666 ORTHO05D033272 6.6e-06 55.1 55 52.7
BraA09t36993Z Brassica rapa HOM05D010997 ORTHO05D014498 6.6e-06 55.1 131 27.5
C09p43860 Brassica napus HOM05D017666 ORTHO05D003352 8.6e-06 54.7 55 52.7


User provided reference genes

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