Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g22103 Brassica carinata HOM05D000353 ORTHO05D012074 6.8e-60 233.8 118 100.0
BolC9t55251H Brassica oleracea HOM05D000353 ORTHO05D012074 9.8e-59 229.9 116 99.1
C09p23330 Brassica napus HOM05D000353 ORTHO05D012074 4.9e-58 227.6 115 99.1
BraA02t07901Z Brassica rapa HOM05D000353 ORTHO05D012074 1.4e-57 226.1 116 97.4
BcaC03g15824 Brassica carinata HOM05D000353 ORTHO05D000174 3.2e-57 224.9 118 96.6
A02p28660 Brassica napus HOM05D000353 ORTHO05D012074 7.0e-57 223.8 115 97.4
BolC5t34001H Brassica oleracea HOM05D000353 ORTHO05D012074 9.2e-57 223.4 116 96.6
BolC5t34015H Brassica oleracea HOM05D000353 ORTHO05D012074 1.6e-56 222.6 116 96.6
BcaC06g33696 Brassica carinata HOM05D000353 ORTHO05D012074 4.6e-56 221.1 118 94.9
BolC2t09049H Brassica oleracea HOM05D000353 ORTHO05D012074 5.9e-56 220.7 116 94.8
BcaC03g15183 Brassica carinata HOM05D000353 ORTHO05D000174 7.8e-56 220.3 118 94.1
BcaC06g36012 Brassica carinata HOM05D000353 ORTHO05D012074 7.8e-56 220.3 118 94.9
BolC4t26685H Brassica oleracea HOM05D000353 ORTHO05D012074 2.3e-55 218.8 116 94.0
BolC5t32307H Brassica oleracea HOM05D000353 ORTHO05D012074 2.3e-55 218.8 116 94.0
C02p27630 Brassica napus HOM05D000353 ORTHO05D012074 3.9e-55 218.0 116 94.0
BolC8t48492H Brassica oleracea HOM05D000353 ORTHO05D012074 5.6e-54 214.2 110 98.2
C07p19100 Brassica napus HOM05D000353 ORTHO05D012074 9.5e-54 213.4 118 90.7
BcaC06g35171 Brassica carinata HOM05D000353 ORTHO05D012074 1.2e-53 213.0 118 90.7
BolC7t42421H Brassica oleracea HOM05D000353 ORTHO05D012074 1.2e-53 213.0 118 90.7
A05p21300 Brassica napus HOM05D000353 ORTHO05D012074 4.7e-53 211.1 118 90.7
BraA05t21038Z Brassica rapa HOM05D000353 ORTHO05D012074 4.7e-53 211.1 118 90.7
C02p47700 Brassica napus HOM05D000353 ORTHO05D012074 1.4e-52 209.5 118 89.0
BcaC05g27602 Brassica carinata HOM05D000353 ORTHO05D012074 2.3e-52 208.8 108 97.2
C05p35880 Brassica napus HOM05D000353 ORTHO05D005681 2.3e-52 208.8 108 97.2
BolC9t57768H Brassica oleracea HOM05D000353 ORTHO05D012074 5.2e-52 207.6 118 91.5
C03p63080 Brassica napus HOM05D000353 ORTHO05D005681 2.4e-49 198.7 106 96.2
A01p27040 Brassica napus HOM05D000353 ORTHO05D012074 5.4e-49 197.6 118 85.6
BraA01t02838Z Brassica rapa HOM05D000353 ORTHO05D012074 5.4e-49 197.6 118 85.6
C05p53350 Brassica napus HOM05D000353 ORTHO05D005681 1.9e-46 189.1 99 97.0
C02p27150 Brassica napus HOM05D000353 ORTHO05D012074 7.3e-46 187.2 118 83.9
C09p49190 Brassica napus HOM05D000353 ORTHO05D005681 2.5e-38 162.2 85 97.6
BcaC09g50234 Brassica carinata HOM05D000353 ORTHO05D005681 1.7e-34 149.4 83 90.4
BcaC05g29110 Brassica carinata HOM05D000353 ORTHO05D039625 3.2e-33 145.2 80 95.0
C09p64180 Brassica napus HOM05D000353 ORTHO05D039625 1.6e-32 142.9 78 92.3
BcaB01g00780 Brassica carinata HOM05D000353 ORTHO05D011975 3.0e-31 138.7 119 61.3
BcaB07g32709 Brassica carinata HOM05D000353 ORTHO05D005681 1.9e-30 136.0 87 77.0
A01p27050 Brassica napus HOM05D000353 ORTHO05D011975 3.1e-28 128.6 118 54.2
BraA01t02839Z Brassica rapa HOM05D000353 ORTHO05D011975 3.1e-28 128.6 118 54.2
C09p23340 Brassica napus HOM05D000353 ORTHO05D011975 4.0e-28 128.3 118 55.1
C02p47690 Brassica napus HOM05D000353 ORTHO05D011975 6.9e-28 127.5 118 53.4
BolC2t10806H Brassica oleracea HOM05D000353 ORTHO05D011975 6.9e-28 127.5 118 53.4
BolC5t31839H Brassica oleracea HOM05D000353 ORTHO05D011975 8.9e-28 127.1 118 53.4
C05p35890 Brassica napus HOM05D000353 ORTHO05D011975 1.2e-27 126.7 118 54.2
A02p28650 Brassica napus HOM05D000353 ORTHO05D011975 1.5e-27 126.3 118 54.2
BraA02t07900Z Brassica rapa HOM05D000353 ORTHO05D011975 1.5e-27 126.3 118 54.2
C05p53380 Brassica napus HOM05D000353 ORTHO05D011975 2.6e-27 125.6 118 54.2
BolC9t57769H Brassica oleracea HOM05D000353 ORTHO05D011975 2.6e-27 125.6 118 54.2
BolC5t34008H Brassica oleracea HOM05D000353 ORTHO05D011975 3.4e-27 125.2 118 53.4
BolC5t34016H Brassica oleracea HOM05D000353 ORTHO05D011975 5.8e-27 124.4 118 53.4
BolC8t48493H Brassica oleracea HOM05D000353 ORTHO05D011975 1.7e-26 122.9 118 54.2
BolC8t47318H Brassica oleracea HOM05D000353 ORTHO05D011975 6.4e-26 120.9 118 51.7
C09p64190 Brassica napus HOM05D000353 ORTHO05D011975 1.4e-25 119.8 113 52.2
BolC9t59256H Brassica oleracea HOM05D000353 ORTHO05D011975 1.4e-25 119.8 113 52.2
C02p27140 Brassica napus HOM05D000353 ORTHO05D000174 2.5e-22 109.0 107 52.3
BcaB02g10509 Brassica carinata HOM05D000353 ORTHO05D005681 1.8e-20 102.8 118 44.9
BolC8t47825H Brassica oleracea HOM05D000353 ORTHO05D039805 1.2e-19 100.1 115 46.1
BcaB01g02874 Brassica carinata HOM05D000353 ORTHO05D011975 2.0e-19 99.4 85 61.2
C02p27620 Brassica napus HOM05D000353 ORTHO05D005681 3.4e-19 98.6 99 51.5
BcaC07g37502 Brassica carinata HOM05D000353 ORTHO05D039805 5.8e-19 97.8 115 46.1
BcaB02g11477 Brassica carinata HOM05D000353 ORTHO05D005681 1.3e-18 96.7 118 39.8
BcaB03g16214 Brassica carinata HOM05D000353 ORTHO05D005681 3.8e-18 95.1 118 44.9
BcaB03g15977 Brassica carinata HOM05D000353 ORTHO05D005681 1.1e-17 93.6 118 40.7
BcaB08g34856 Brassica carinata HOM05D000353 ORTHO05D005681 9.3e-17 90.5 118 39.8
BcaB08g34640 Brassica carinata HOM05D000353 ORTHO05D005681 1.6e-16 89.7 118 38.1
C03p63090 Brassica napus HOM05D000353 ORTHO05D011975 1.6e-16 89.7 95 50.5
BcaB04g17266 Brassica carinata HOM05D000353 ORTHO05D005681 2.1e-16 89.4 118 38.1
BcaB04g18044 Brassica carinata HOM05D000353 ORTHO05D005681 2.1e-16 89.4 118 38.1
C09p21140 Brassica napus HOM05D000353 ORTHO05D013242 2.7e-16 89.0 116 42.2
BcaB05g24102 Brassica carinata HOM05D000353 ORTHO05D005681 4.6e-16 88.2 117 41.9
BolC9t55015H Brassica oleracea HOM05D000353 ORTHO05D013242 6.0e-16 87.8 116 42.2
C09p17520 Brassica napus HOM05D000353 ORTHO05D099299 1.3e-15 86.7 46 97.8
C02p55690 Brassica napus HOM05D000353 ORTHO05D005681 1.8e-15 86.3 108 41.7
BcaB01g01095 Brassica carinata HOM05D000353 ORTHO05D005681 3.0e-15 85.5 118 37.3
C09p17510 Brassica napus HOM05D000353 ORTHO05D011975 3.9e-15 85.1 95 48.4
BolC5t32308H Brassica oleracea HOM05D000353 ORTHO05D011975 5.1e-15 84.7 108 46.3
BcaB06g27200 Brassica carinata HOM05D000353 ORTHO05D005681 6.7e-15 84.3 118 38.1
BcaB03g16076 Brassica carinata HOM05D000353 ORTHO05D005681 4.3e-14 81.6 106 39.6
BolC7t42422H Brassica oleracea HOM05D000353 ORTHO05D011975 5.6e-14 81.3 78 51.3
BolC5t32503H Brassica oleracea HOM05D000353 ORTHO05D042563 2.1e-13 79.3 87 48.3
BraA02t07832Z Brassica rapa HOM05D000353 ORTHO05D027349 2.1e-13 79.3 115 34.8
BcaC01g04869 Brassica carinata HOM05D000353 ORTHO05D027041 3.7e-13 78.6 117 35.9
BcaB03g16438 Brassica carinata HOM05D000353 ORTHO05D013242 6.2e-13 77.8 94 41.5
C05p37620 Brassica napus HOM05D000353 ORTHO05D042563 6.2e-13 77.8 87 47.1
C03p32830 Brassica napus HOM05D000353 ORTHO05D027041 1.1e-12 77.0 117 35.0
BolC3t15617H Brassica oleracea HOM05D000353 ORTHO05D027041 1.1e-12 77.0 117 35.0
BcaB05g22042 Brassica carinata HOM05D000353 ORTHO05D000199 1.4e-12 76.6 93 49.5
BcaB01g01538 Brassica carinata HOM05D011453 ORTHO05D014511 6.9e-12 74.3 95 42.1
BcaB01g02451 Brassica carinata HOM05D003591 ORTHO05D021638 1.2e-11 73.6 115 36.5
BcaC05g27208 Brassica carinata HOM05D000353 ORTHO05D011975 2.6e-11 72.4 69 50.7
BolC8t48064H Brassica oleracea HOM05D000353 ORTHO05D033592 2.6e-11 72.4 105 36.2
A05p21310 Brassica napus HOM05D000353 ORTHO05D042653 1.3e-10 70.1 118 36.4
BcaB08g35178 Brassica carinata HOM05D000353 ORTHO05D032815 1.7e-10 69.7 80 47.5
BcaB01g01136 Brassica carinata HOM05D000353 ORTHO05D013242 1.9e-09 66.2 86 39.5
BcaB01g01176 Brassica carinata HOM05D000353 ORTHO05D092964 3.2e-09 65.5 75 38.7
BcaC08g43066 Brassica carinata HOM05D000353 ORTHO05D027041 4.2e-09 65.1 112 37.5
C07p19110 Brassica napus HOM05D000353 ORTHO05D011975 4.2e-09 65.1 60 50.0
C09p33370 Brassica napus HOM05D003591 ORTHO05D005681 1.2e-08 63.5 112 35.7
BolC5t32374H Brassica oleracea HOM05D000353 ORTHO05D000174 1.6e-08 63.2 66 47.0
BcaB02g11108 Brassica carinata HOM05D000353 ORTHO05D005681 6.0e-08 61.2 89 37.1
BcaC06g34843 Brassica carinata HOM05D003591 ORTHO05D005681 6.0e-08 61.2 112 33.9
BolC7t42807H Brassica oleracea HOM05D003591 ORTHO05D005681 6.0e-08 61.2 112 33.9
BolC9t56172H Brassica oleracea HOM05D003591 ORTHO05D005681 6.0e-08 61.2 107 36.4
C04p36250 Brassica napus HOM05D003591 ORTHO05D005681 1.0e-07 60.5 112 33.0
BolC1t02629H Brassica oleracea HOM05D003591 ORTHO05D005681 1.0e-07 60.5 112 33.9
BolC4t25162H Brassica oleracea HOM05D003591 ORTHO05D005681 1.0e-07 60.5 112 33.0
C02p34170 Brassica napus HOM05D003591 ORTHO05D005681 1.3e-07 60.1 112 33.0
C05p37600 Brassica napus HOM05D000353 ORTHO05D040703 1.3e-07 60.1 60 51.7
BolC2t08413H Brassica oleracea HOM05D003591 ORTHO05D005681 2.3e-07 59.3 112 33.0
BcaB04g17828 Brassica carinata HOM05D003591 ORTHO05D005681 3.0e-07 58.9 112 31.2
BcaB08g35405 Brassica carinata HOM05D000353 ORTHO05D023971 3.0e-07 58.9 102 31.4
C04p20950 Brassica napus HOM05D003591 ORTHO05D005681 3.0e-07 58.9 112 32.1
BolC5t32499H Brassica oleracea HOM05D000353 ORTHO05D040703 3.0e-07 58.9 57 52.6
C01p40950 Brassica napus HOM05D003591 ORTHO05D005681 3.9e-07 58.5 112 32.1
BolC4t23171H Brassica oleracea HOM05D003591 ORTHO05D005681 3.9e-07 58.5 112 33.0
C02p32250 Brassica napus HOM05D003591 ORTHO05D005681 5.1e-07 58.2 112 32.1
C05p33180 Brassica napus HOM05D003591 ORTHO05D005681 5.1e-07 58.2 112 32.1
C05p35170 Brassica napus HOM05D003591 ORTHO05D005681 5.1e-07 58.2 112 32.1
C07p31990 Brassica napus HOM05D003591 ORTHO05D005681 5.1e-07 58.2 112 32.1
C09p28690 Brassica napus HOM05D003591 ORTHO05D005681 5.1e-07 58.2 112 32.1
BolC2t09405H Brassica oleracea HOM05D003591 ORTHO05D005681 5.1e-07 58.2 113 34.5
BolC4t25466H Brassica oleracea HOM05D003591 ORTHO05D005681 5.1e-07 58.2 112 32.1
BcaB04g17486 Brassica carinata HOM05D003591 ORTHO05D005681 6.7e-07 57.8 114 30.7
C02p28120 Brassica napus HOM05D003591 ORTHO05D005681 6.7e-07 57.8 112 33.0
C06p29690 Brassica napus HOM05D003591 ORTHO05D005681 6.7e-07 57.8 112 32.1
BolC2t08856H Brassica oleracea HOM05D003591 ORTHO05D005681 6.7e-07 57.8 112 33.0
BolC2t09403H Brassica oleracea HOM05D003591 ORTHO05D005681 6.7e-07 57.8 112 32.1
BolC5t32448H Brassica oleracea HOM05D003591 ORTHO05D005681 6.7e-07 57.8 112 32.1
BcaB05g21746 Brassica carinata HOM05D007309 ORTHO05D010099 1.1e-06 57.0 113 33.6
A07p09370 Brassica napus HOM05D025466 ORTHO05D013242 1.1e-06 57.0 56 51.8
BolC3t20044H Brassica oleracea HOM05D003591 ORTHO05D005681 1.1e-06 57.0 112 32.1
BolC6t37339H Brassica oleracea HOM05D003591 ORTHO05D005681 1.1e-06 57.0 112 32.1
BolC9t57338H Brassica oleracea HOM05D003591 ORTHO05D005681 1.1e-06 57.0 112 31.2
BraA07t28733Z Brassica rapa HOM05D025466 ORTHO05D013242 1.1e-06 57.0 56 51.8
BcaB07g33228 Brassica carinata HOM05D000353 ORTHO05D023971 1.5e-06 56.6 92 34.8
C01p09530 Brassica napus HOM05D003591 ORTHO05D005681 1.5e-06 56.6 112 31.2
C08p14230 Brassica napus HOM05D003591 ORTHO05D005681 1.5e-06 56.6 112 31.2
C02p22600 Brassica napus HOM05D003591 ORTHO05D005681 1.9e-06 56.2 112 32.1
C04p15980 Brassica napus HOM05D003591 ORTHO05D005681 1.9e-06 56.2 112 32.1
C04p36620 Brassica napus HOM05D003591 ORTHO05D005681 1.9e-06 56.2 112 31.2
BolC3t15622H Brassica oleracea HOM05D003591 ORTHO05D005681 1.9e-06 56.2 112 31.2
BolC4t25135H Brassica oleracea HOM05D003591 ORTHO05D005681 1.9e-06 56.2 112 31.2
BolC9t55252H Brassica oleracea HOM05D000353 ORTHO05D042653 1.9e-06 56.2 41 61.0
C09p13180 Brassica napus HOM05D003591 ORTHO05D005681 2.5e-06 55.8 112 32.1
BolC9t54212H Brassica oleracea HOM05D003591 ORTHO05D005681 2.5e-06 55.8 112 32.1
BolC9t59255H Brassica oleracea HOM05D000353 ORTHO05D105477 2.5e-06 55.8 32 81.2
BcaB01g01500 Brassica carinata HOM05D003591 ORTHO05D005681 4.3e-06 55.1 107 30.8
A08p10030 Brassica napus HOM05D000353 ORTHO05D033592 4.3e-06 55.1 76 36.8
C02p09960 Brassica napus HOM05D003591 ORTHO05D005681 4.3e-06 55.1 112 32.1
C05p37070 Brassica napus HOM05D003591 ORTHO05D005681 5.6e-06 54.7 112 32.1
BolC4t27380H Brassica oleracea HOM05D003591 ORTHO05D005681 5.6e-06 54.7 112 31.2
BolC7t41596H Brassica oleracea HOM05D003591 ORTHO05D005681 5.6e-06 54.7 112 32.1
BcaB08g35627 Brassica carinata HOM05D003591 ORTHO05D005681 7.4e-06 54.3 112 28.6
BcaC01g03288 Brassica carinata HOM05D003591 ORTHO05D005681 7.4e-06 54.3 113 34.5
BolC5t32233H Brassica oleracea HOM05D003591 ORTHO05D005681 7.4e-06 54.3 112 31.2
BcaC02g09819 Brassica carinata HOM05D003591 ORTHO05D005681 9.6e-06 53.9 108 31.5


User provided reference genes

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