Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g22013 Brassica carinata HOM05D004182 ORTHO05D010127 3.2e-47 191.4 97 100.0
C09p24670 Brassica napus HOM05D001966 ORTHO05D007227 1.3e-21 106.3 56 96.4
Lsat_1_v5_gn_6_14541 Lactuca sativa HOM05D001966 ORTHO05D010127 3.3e-20 101.7 112 60.7
EL10Ac7g17373 Beta vulgaris HOM05D004182 ORTHO05D010127 5.8e-17 90.9 109 51.4
FAN13G1592 Fragaria x ananassa HOM05D001966 ORTHO05D010127 1.7e-16 89.4 139 48.9
arahy.Tifrunner.gnm1.ann1.WY6BZE Arachis hypogaea HOM05D004182 ORTHO05D010127 3.8e-16 88.2 138 47.8
arahy.Tifrunner.gnm1.ann1.H5WC3R Arachis hypogaea HOM05D001966 ORTHO05D011119 9.3e-15 83.6 115 47.8
arahy.Tifrunner.gnm1.ann1.9XT8BN Arachis hypogaea HOM05D001966 ORTHO05D010127 7.9e-14 80.5 103 50.5
arahy.Tifrunner.gnm1.ann1.U90T8C Arachis hypogaea HOM05D004182 ORTHO05D010127 7.9e-14 80.5 103 50.5
BcaC04g20783 Brassica carinata HOM05D004182 ORTHO05D010127 1.1e-12 76.6 88 52.3
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 3.3e-12 75.1 113 50.4
Cpa.g.sc2529.2 Carica papaya HOM05D004182 ORTHO05D010127 2.2e-11 72.4 86 52.3
BolSC29t60540H Brassica oleracea HOM05D004182 ORTHO05D007321 4.8e-11 71.2 56 69.6
BolSC35t60684H Brassica oleracea HOM05D004182 ORTHO05D007321 4.8e-11 71.2 56 69.6
BolSC44t60815H Brassica oleracea HOM05D004182 ORTHO05D010127 4.8e-11 71.2 56 69.6
BolSC44t60830H Brassica oleracea HOM05D004182 ORTHO05D007321 4.8e-11 71.2 56 69.6
BolSC45t60917H Brassica oleracea HOM05D004182 ORTHO05D007321 4.8e-11 71.2 56 69.6
BolSC49t61134H Brassica oleracea HOM05D004182 ORTHO05D007321 4.8e-11 71.2 56 69.6
BraSC103t45421Z Brassica rapa HOM05D004182 ORTHO05D007321 4.8e-11 71.2 56 69.6
BraSC103t45434Z Brassica rapa HOM05D004182 ORTHO05D010127 4.8e-11 71.2 56 69.6
BraSC138t45528Z Brassica rapa HOM05D004182 ORTHO05D007321 4.8e-11 71.2 56 69.6
BraSC25t45903Z Brassica rapa HOM05D004182 ORTHO05D010127 4.8e-11 71.2 56 69.6
BraSC25t45918Z Brassica rapa HOM05D004182 ORTHO05D007321 4.8e-11 71.2 56 69.6
BraSC59t46534Z Brassica rapa HOM05D004182 ORTHO05D007321 4.8e-11 71.2 56 69.6
Oeu008622.1 Olea europaea HOM05D000866 ORTHO05D000673 8.2e-11 70.5 110 47.3
FAN26G2239 Fragaria x ananassa HOM05D004182 ORTHO05D010449 3.1e-10 68.6 71 62.0
Nitab4.5_0003644g0040 Nicotiana tabacum HOM05D001966 ORTHO05D010127 5.3e-10 67.8 118 44.1
Sopen02g009080 Solanum pennellii HOM05D004182 ORTHO05D007321 1.2e-09 66.6 82 58.5
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 1.5e-09 66.2 84 57.1
Gohir.D13G086950 Gossypium hirsutum HOM05D004182 ORTHO05D010127 2.9e-08 62.0 59 62.7
Cpa.g.sc37.79 Carica papaya HOM05D004182 ORTHO05D010127 3.8e-08 61.6 67 62.7
Peaxi162Scf00263g00168 Petunia axillaris HOM05D001966 ORTHO05D010127 3.8e-08 61.6 106 47.2
TPR.G18363 Trifolium pratense HOM05D000107 ORTHO05D000062 1.9e-07 59.3 55 58.2
VMungo0942G0003 Vigna mungo HOM05D004182 ORTHO05D007321 1.9e-07 59.3 67 61.2
Atru.chr1.3577 Acer truncatum HOM05D000680 ORTHO05D000738 5.5e-07 57.8 64 56.2
C04p22500 Brassica napus HOM05D004182 ORTHO05D010127 7.2e-07 57.4 71 49.3
Gohir.A01G139755 Gossypium hirsutum HOM05D001966 ORTHO05D010127 1.2e-06 56.6 43 67.4
Sopen11g020180 Solanum pennellii HOM05D001966 ORTHO05D010127 1.2e-06 56.6 43 67.4
Nn029s41582 Nelumbo nucifera HOM05D001966 ORTHO05D010127 1.6e-06 56.2 51 62.7
Nn031s41607 Nelumbo nucifera HOM05D001966 ORTHO05D010127 1.6e-06 56.2 51 62.7
Nn064s42219 Nelumbo nucifera HOM05D001966 ORTHO05D010127 1.6e-06 56.2 51 62.7
Nn212s45204 Nelumbo nucifera HOM05D001966 ORTHO05D010127 1.6e-06 56.2 51 62.7
Nn264s45948 Nelumbo nucifera HOM05D001966 ORTHO05D010127 1.6e-06 56.2 51 62.7
Nn304s46230 Nelumbo nucifera HOM05D001966 ORTHO05D010127 1.6e-06 56.2 51 62.7
Nn349s46476 Nelumbo nucifera HOM05D001966 ORTHO05D010127 1.6e-06 56.2 51 62.7
Nn403s46569 Nelumbo nucifera HOM05D001966 ORTHO05D010127 1.6e-06 56.2 51 62.7
Nn442s46689 Nelumbo nucifera HOM05D001966 ORTHO05D010127 1.6e-06 56.2 51 62.7
Nn4g25380 Nelumbo nucifera HOM05D001966 ORTHO05D010127 1.6e-06 56.2 51 62.7
BolSC29t60554H Brassica oleracea HOM05D004182 ORTHO05D007321 2.1e-06 55.8 90 47.8
BolSC35t60712H Brassica oleracea HOM05D004182 ORTHO05D007321 2.1e-06 55.8 90 47.8
BolSC46t60966H Brassica oleracea HOM05D004182 ORTHO05D007321 2.1e-06 55.8 104 46.2
Nitab4.5_0012517g0030 Nicotiana tabacum HOM05D004182 ORTHO05D010127 2.1e-06 55.8 72 54.2
Peaxi162Scf01071g00036 Petunia axillaris HOM05D001966 ORTHO05D010127 2.1e-06 55.8 117 40.2
Sc04g0003140 Simmondsia chinensis HOM05D004182 ORTHO05D010127 2.7e-06 55.5 83 49.4
LjContig00318g0013893 Lotus japonicus HOM05D004182 ORTHO05D007321 3.6e-06 55.1 43 67.4
Nitab4.5_0006306g0030 Nicotiana tabacum HOM05D001966 ORTHO05D010127 4.6e-06 54.7 43 67.4
arahy.Tifrunner.gnm1.ann1.QSVN22 Arachis hypogaea HOM05D004182 ORTHO05D010127 6.1e-06 54.3 32 90.6
Lsat_1_v5_gn_6_14561 Lactuca sativa HOM05D001966 ORTHO05D010127 6.1e-06 54.3 42 66.7
Cpa.g.sc302.2 Carica papaya HOM05D001966 ORTHO05D010127 7.9e-06 53.9 51 62.7
Gohir.1Z050966 Gossypium hirsutum HOM05D001966 ORTHO05D010127 7.9e-06 53.9 51 62.7


User provided reference genes

Program Settings