Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g22012 Brassica carinata HOM05D001966 ORTHO05D007227 5.3e-198 694.1 342 100.0
C09p24670 Brassica napus HOM05D001966 ORTHO05D007227 4.8e-74 282.3 264 58.7
C09p39340 Brassica napus HOM05D001966 ORTHO05D007227 4.8e-74 282.3 264 58.7
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 1.1e-54 218.0 511 35.6
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 1.5e-35 154.5 200 47.5
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 8.6e-31 138.7 262 41.6
arahy.Tifrunner.gnm1.ann1.8D90VP Arachis hypogaea HOM05D001966 ORTHO05D007227 2.9e-26 123.6 358 31.3
arahy.Tifrunner.gnm1.ann1.WI2XKB Arachis hypogaea HOM05D001966 ORTHO05D007227 3.7e-26 123.2 399 29.8
Gohir.1Z049782 Gossypium hirsutum HOM05D001966 ORTHO05D007227 2.4e-25 120.6 115 59.1
Gohir.A04G039285 Gossypium hirsutum HOM05D001966 ORTHO05D007227 2.4e-25 120.6 115 59.1
Gohir.A05G323732 Gossypium hirsutum HOM05D001966 ORTHO05D007227 2.4e-25 120.6 115 59.1
Lsat_1_v5_gn_2_20521 Lactuca sativa HOM05D001966 ORTHO05D007227 3.2e-25 120.2 224 40.6
Lsat_1_v5_gn_5_181880 Lactuca sativa HOM05D001966 ORTHO05D007227 3.2e-25 120.2 224 40.6
EL10As10g23965 Beta vulgaris HOM05D001966 ORTHO05D007227 5.4e-25 119.4 134 54.5
Gohir.A13G086695 Gossypium hirsutum HOM05D001966 ORTHO05D007227 2.7e-24 117.1 114 57.9
arahy.Tifrunner.gnm1.ann1.KZKE62 Arachis hypogaea HOM05D001966 ORTHO05D007227 1.3e-23 114.8 229 38.0
BcaC04g20781 Brassica carinata HOM05D001966 ORTHO05D010449 5.6e-22 109.4 58 91.4
BcaNung01515 Brassica carinata HOM05D001966 ORTHO05D010449 9.5e-22 108.6 56 92.9
Gohir.1Z049882 Gossypium hirsutum HOM05D001966 ORTHO05D007227 2.8e-21 107.1 57 91.2
Gohir.A04G039270 Gossypium hirsutum HOM05D001966 ORTHO05D007227 2.8e-21 107.1 57 91.2
Gohir.A05G323724 Gossypium hirsutum HOM05D001966 ORTHO05D007227 2.8e-21 107.1 57 91.2
arahy.Tifrunner.gnm1.ann1.UQV5ZS Arachis hypogaea HOM05D001966 ORTHO05D007227 3.6e-21 106.7 57 93.0
arahy.Tifrunner.gnm1.ann1.Z8IK0I Arachis hypogaea HOM05D001966 ORTHO05D007227 3.6e-21 106.7 57 93.0
Medtr0002s0250 Medicago truncatula HOM05D001966 ORTHO05D007227 3.6e-21 106.7 118 54.2
Sed0012652 Sechium edule HOM05D001966 ORTHO05D007227 3.6e-21 106.7 57 93.0
Phvul.002G203700 Phaseolus vulgaris HOM05D001966 ORTHO05D007227 1.1e-20 105.1 78 69.2
Gorai.007G237800 Gossypium raimondii HOM05D001966 ORTHO05D007227 1.8e-20 104.4 127 51.2
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 2.4e-20 104.0 54 90.7
VMungo0720G2248 Vigna mungo HOM05D001966 ORTHO05D007227 5.2e-20 102.8 55 89.1
Sopen06g012240 Solanum pennellii HOM05D000014 ORTHO05D000016 1.2e-19 101.7 54 92.6
arahy.Tifrunner.gnm1.ann1.FN7561 Arachis hypogaea HOM05D001966 ORTHO05D007227 2.0e-19 100.9 234 34.2
arahy.Tifrunner.gnm1.ann1.HASF1T Arachis hypogaea HOM05D001966 ORTHO05D007227 2.6e-19 100.5 57 87.7
arahy.Tifrunner.gnm1.ann1.3I0RGA Arachis hypogaea HOM05D001966 ORTHO05D007227 5.8e-19 99.4 57 84.2
VMungo1127G1224 Vigna mungo HOM05D001966 ORTHO05D007227 9.9e-19 98.6 54 87.0
SalBow1G8704 Salvia bowleyana HOM05D001966 ORTHO05D007227 1.3e-18 98.2 110 50.0
Gohir.D02G016950 Gossypium hirsutum HOM05D001966 ORTHO05D007227 2.2e-18 97.4 57 82.5
Lsat_1_v5_gn_3_110440 Lactuca sativa HOM05D001966 ORTHO05D007227 1.1e-17 95.1 200 38.0
Lsat_1_v5_gn_6_94301 Lactuca sativa HOM05D001966 ORTHO05D007227 1.1e-17 95.1 200 38.0
LjContig00489g0013211 Lotus japonicus HOM05D001966 ORTHO05D007227 1.9e-17 94.4 226 36.7
Gorai.005G020800 Gossypium raimondii HOM05D001966 ORTHO05D007227 2.4e-17 94.0 57 77.2
Lsat_1_v5_gn_4_147860 Lactuca sativa HOM05D001966 ORTHO05D007227 5.4e-17 92.8 108 55.6
MD15G1346300 Malus domestica HOM05D001966 ORTHO05D007227 7.1e-17 92.4 57 84.2
Migut.B00950 Erythranthe guttata HOM05D001966 ORTHO05D007227 1.2e-16 91.7 49 91.8
Oeu022559.1 Olea europaea HOM05D001966 ORTHO05D011119 3.5e-16 90.1 53 81.1
Lsat_1_v5_gn_9_39281 Lactuca sativa HOM05D001966 ORTHO05D007227 1.3e-15 88.2 88 56.8
arahy.Tifrunner.gnm1.ann1.F2PHFK Arachis hypogaea HOM05D000890 ORTHO05D000697 6.6e-15 85.9 45 86.7
BraSC58t46466Z Brassica rapa HOM05D001966 ORTHO05D007227 8.7e-15 85.5 43 95.3
Gohir.A09G039165 Gossypium hirsutum HOM05D001966 ORTHO05D007227 8.7e-15 85.5 55 78.2
Sed0014217 Sechium edule HOM05D001966 ORTHO05D007227 8.7e-15 85.5 46 91.3
Lsat_1_v5_gn_4_147680 Lactuca sativa HOM05D001966 ORTHO05D007227 1.5e-14 84.7 53 79.2
SHI36539 Sapria himalayana HOM05D001966 ORTHO05D007227 1.5e-14 84.7 52 78.8
Gorai.006G045900 Gossypium raimondii HOM05D001966 ORTHO05D007227 3.3e-14 83.6 55 74.5
arahy.Tifrunner.gnm1.ann1.3QB7SN Arachis hypogaea HOM05D001966 ORTHO05D007227 4.3e-14 83.2 49 81.6
Peaxi162Scf00383g00065 Petunia axillaris HOM05D001966 ORTHO05D007227 3.6e-13 80.1 42 90.5
EL10Ac8g19706 Beta vulgaris HOM05D001966 ORTHO05D010588 6.2e-13 79.3 111 48.6
EL10As10g23964 Beta vulgaris HOM05D001966 ORTHO05D010055 1.8e-12 77.8 151 40.4
arahy.Tifrunner.gnm1.ann1.JURL6Q Arachis hypogaea HOM05D001966 ORTHO05D007227 5.3e-12 76.3 59 64.4
SHI36395 Sapria himalayana HOM05D001966 ORTHO05D010986 5.3e-12 76.3 156 34.6
HPP92_028386 Vanilla planifolia HOM05D009726 ORTHO05D010055 5.3e-12 76.3 114 45.6
HPP92_028396 Vanilla planifolia HOM05D001966 ORTHO05D007227 5.3e-12 76.3 39 92.3
HPP92_028404 Vanilla planifolia HOM05D001966 ORTHO05D007227 5.3e-12 76.3 39 92.3
HPP92_028413 Vanilla planifolia HOM05D001966 ORTHO05D007227 5.3e-12 76.3 39 92.3
HPP92_028421 Vanilla planifolia HOM05D001966 ORTHO05D007227 5.3e-12 76.3 39 92.3
HPP92_028428 Vanilla planifolia HOM05D001966 ORTHO05D007227 5.3e-12 76.3 39 92.3
HPP92_028434 Vanilla planifolia HOM05D001966 ORTHO05D007227 5.3e-12 76.3 39 92.3
Sed0001460 Sechium edule HOM05D001966 ORTHO05D007227 9.0e-12 75.5 42 83.3
Phvul.003G142600 Phaseolus vulgaris HOM05D001966 ORTHO05D007227 1.2e-11 75.1 45 82.2
Sopen06g018470 Solanum pennellii HOM05D001966 ORTHO05D007227 2.9e-10 70.5 35 94.3
Lalb_Chr17g0346961 Lupinus albus HOM05D008016 ORTHO05D010588 6.4e-10 69.3 42 81.0
Peaxi162Scf00687g00611 Petunia axillaris HOM05D001966 ORTHO05D010055 1.4e-09 68.2 136 39.7
arahy.Tifrunner.gnm1.ann1.DHX5K3 Arachis hypogaea HOM05D001966 ORTHO05D007227 1.2e-08 65.1 48 72.9
Peaxi162Scf01600g00007 Petunia axillaris HOM05D001966 ORTHO05D010986 1.6e-08 64.7 33 90.9
Lsat_1_v5_gn_4_147840 Lactuca sativa HOM05D008016 ORTHO05D010588 2.1e-08 64.3 51 68.6
Nitab4.5_0005831g0030 Nicotiana tabacum HOM05D001090 ORTHO05D006167 2.1e-08 64.3 48 68.8
Gorai.008G099100 Gossypium raimondii HOM05D001070 ORTHO05D010233 2.7e-08 63.9 37 83.8
LjContig00319g0014927 Lotus japonicus HOM05D001966 ORTHO05D007227 1.3e-07 61.6 33 93.9
SHI26755 Sapria himalayana HOM05D001966 ORTHO05D010986 1.3e-07 61.6 54 61.1
CAN.G1648.17 Capsicum annuum HOM05D001966 ORTHO05D007227 1.7e-07 61.2 30 93.3
EL10Ac8g19704 Beta vulgaris HOM05D001966 ORTHO05D007227 2.3e-07 60.8 28 92.9
ClCG04G004710 Citrullus lanatus HOM05D001966 ORTHO05D007429 2.3e-07 60.8 40 75.0
Nitab4.5_0007400g0100 Nicotiana tabacum HOM05D008016 ORTHO05D004271 3.9e-07 60.1 88 44.3
arahy.Tifrunner.gnm1.ann1.WHCD0B Arachis hypogaea HOM05D001966 ORTHO05D007227 5.1e-07 59.7 36 83.3
Gohir.D12G091540 Gossypium hirsutum HOM05D001070 ORTHO05D010233 5.1e-07 59.7 37 78.4
BcaC05g27379 Brassica carinata HOM05D008016 ORTHO05D021751 6.6e-07 59.3 75 48.0
Nitab4.5_0001727g0120 Nicotiana tabacum HOM05D008016 ORTHO05D010055 1.5e-06 58.2 41 70.7
Lalb_Chr24g0400891 Lupinus albus HOM05D001966 ORTHO05D010986 4.3e-06 56.6 66 54.5
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 5.6e-06 56.2 75 50.7
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 5.6e-06 56.2 138 34.1


User provided reference genes

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