Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 2.4e-81 305.4 157 100.0
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 2.7e-80 302.0 157 98.7
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 1.9e-78 295.8 157 97.5
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 1.9e-78 295.8 157 97.5
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 1.9e-78 295.8 157 96.2
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 5.5e-73 277.7 159 91.8
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 1.8e-71 272.7 157 93.6
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 2.1e-69 265.8 158 91.1
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 2.8e-69 265.4 157 89.8
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 6.9e-68 260.8 160 88.1
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 3.4e-67 258.5 159 88.1
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 9.7e-62 240.4 160 83.8
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 1.1e-60 236.9 159 79.2
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 1.3e-55 219.9 162 75.3
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 8.2e-53 210.7 157 73.9
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 1.8e-52 209.5 163 73.0
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 1.8e-52 209.5 163 73.0
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 1.8e-52 209.5 163 73.0
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 4.1e-52 208.4 158 72.8
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 4.1e-52 208.4 160 72.5
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 4.1e-52 208.4 163 71.2
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 5.3e-52 208.0 135 84.4
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 5.3e-52 208.0 157 73.9
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 5.3e-52 208.0 148 75.0
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 5.3e-52 208.0 126 84.9
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 6.9e-52 207.6 146 75.3
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 6.9e-52 207.6 158 73.4
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 1.2e-51 206.8 157 73.2
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 2.6e-51 205.7 157 73.2
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 2.6e-51 205.7 157 73.9
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.6e-51 205.7 160 73.1
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 2.6e-51 205.7 160 72.5
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 3.4e-51 205.3 158 74.1
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 4.5e-51 204.9 153 74.5
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 4.5e-51 204.9 160 75.0
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 4.5e-51 204.9 157 73.2
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 5.9e-51 204.5 158 72.8
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 5.9e-51 204.5 129 83.7
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 5.9e-51 204.5 116 91.4
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 7.7e-51 204.1 158 72.2
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 7.7e-51 204.1 117 90.6
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 1.0e-50 203.8 153 75.2
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 1.3e-50 203.4 158 72.8
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.3e-50 203.4 165 70.9
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 1.3e-50 203.4 134 80.6
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 1.3e-50 203.4 157 71.3
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 1.3e-50 203.4 157 72.6
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 1.7e-50 203.0 160 72.5
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 1.7e-50 203.0 157 72.0
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 1.7e-50 203.0 158 71.5
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 1.7e-50 203.0 163 70.6
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 2.2e-50 202.6 126 84.9
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 2.9e-50 202.2 157 72.6
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 2.9e-50 202.2 160 71.9
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 2.9e-50 202.2 158 71.5
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 3.8e-50 201.8 158 70.9
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 3.8e-50 201.8 116 90.5
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 5.0e-50 201.4 126 84.1
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 6.5e-50 201.1 136 77.9
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 6.5e-50 201.1 116 86.2
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 1.1e-49 200.3 158 71.5
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 1.1e-49 200.3 158 71.5
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 1.1e-49 200.3 159 71.1
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 1.1e-49 200.3 157 69.4
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 1.1e-49 200.3 160 71.9
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 1.4e-49 199.9 159 70.4
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 1.9e-49 199.5 117 88.0
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 1.9e-49 199.5 129 81.4
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 2.5e-49 199.1 157 71.3
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 2.5e-49 199.1 136 77.2
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 2.5e-49 199.1 160 70.6
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 3.2e-49 198.7 157 71.3
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 4.2e-49 198.4 116 86.2
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 1.6e-48 196.4 116 85.3
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 2.1e-48 196.1 116 85.3
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 2.1e-48 196.1 157 70.1
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 3.6e-48 195.3 159 70.4
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 4.6e-48 194.9 164 68.3
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 6.1e-48 194.5 167 67.7
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 7.9e-48 194.1 116 85.3
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 3.9e-47 191.8 164 67.7
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 6.7e-47 191.0 159 66.7
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 8.8e-47 190.7 127 78.7
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 1.5e-46 189.9 116 87.9
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 1.5e-46 189.9 155 67.7
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 1.5e-46 189.9 125 80.8
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 5.7e-46 188.0 157 68.2
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 5.7e-46 188.0 157 68.2
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 2.6e-43 179.1 157 65.6
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 8.5e-42 174.1 116 73.3
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 8.8e-39 164.1 132 64.4
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 4.8e-37 158.3 117 69.2
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 3.1e-36 155.6 104 73.1
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 1.2e-35 153.7 131 64.9
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 2.0e-35 152.9 129 69.0
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 2.0e-35 152.9 112 76.8
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 2.6e-35 152.5 122 69.7
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 3.5e-35 152.1 127 67.7
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 1.3e-34 150.2 114 71.9
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 2.9e-34 149.1 106 73.6
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 1.1e-33 147.1 127 66.9
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 1.1e-33 147.1 162 59.3
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 1.5e-33 146.7 122 68.9
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 1.9e-33 146.4 89 84.3
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 2.5e-33 146.0 128 65.6
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 3.2e-33 145.6 128 64.8
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 6.7e-31 137.9 99 71.7
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 2.8e-29 132.5 138 55.8
MCO11G758 Micromonas commoda HOM05D007050 ORTHO05D008849 5.7e-14 81.6 134 41.8
CsaV3_5G027180 Cucumis sativus L. HOM05D007050 ORTHO05D008849 1.3e-13 80.5 64 71.9
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 1.6e-11 73.6 68 51.5


User provided reference genes

Program Settings