Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g21914 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-53 212.2 103 100.0
BcaC02g10097 Brassica carinata HOM05D000305 ORTHO05D000065 3.4e-47 191.4 107 89.7
BolC4t24845H Brassica oleracea HOM05D000305 ORTHO05D000065 7.3e-42 173.7 99 87.9
BcaC03g14374 Brassica carinata HOM05D000305 ORTHO05D000065 8.0e-41 170.2 86 94.2
C06p53880 Brassica napus HOM05D000313 ORTHO05D000065 4.0e-24 114.8 55 92.7
BcaB05g24331 Brassica carinata HOM05D000305 ORTHO05D000065 7.6e-23 110.5 98 56.1
BcaB06g27784 Brassica carinata HOM05D000305 ORTHO05D000065 4.9e-22 107.8 93 57.0
BcaB06g28312 Brassica carinata HOM05D000313 ORTHO05D000065 9.2e-21 103.6 95 53.7
BcaC02g10952 Brassica carinata HOM05D000313 ORTHO05D000065 7.8e-20 100.5 93 52.7
C09p55230 Brassica napus HOM05D000313 ORTHO05D000065 4.4e-15 84.7 82 54.9
BraA05t19978Z Brassica rapa HOM05D000313 ORTHO05D000065 5.8e-15 84.3 84 52.4
BcaC04g19486 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-14 83.2 81 54.3
C09p43600 Brassica napus HOM05D000313 ORTHO05D000065 4.9e-14 81.3 92 44.6
C06p14800 Brassica napus HOM05D000313 ORTHO05D000065 2.4e-13 79.0 78 52.6
C07p05170 Brassica napus HOM05D000313 ORTHO05D000065 2.4e-13 79.0 92 43.5
BolC6t36658H Brassica oleracea HOM05D000313 ORTHO05D000065 2.4e-13 79.0 78 52.6
BolC6t37003H Brassica oleracea HOM05D000313 ORTHO05D000065 2.4e-13 79.0 92 43.5
C05p00190 Brassica napus HOM05D000313 ORTHO05D000065 9.3e-13 77.0 92 42.4
C09p25860 Brassica napus HOM05D000313 ORTHO05D000065 9.3e-13 77.0 40 100.0
C05p21180 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-11 72.8 103 39.8
C07p18420 Brassica napus HOM05D000313 ORTHO05D000065 3.0e-11 72.0 92 42.4
C04p23320 Brassica napus HOM05D000313 ORTHO05D000065 3.9e-11 71.6 61 54.1
C02p26880 Brassica napus HOM05D000313 ORTHO05D000065 7.3e-10 67.4 84 46.4
C05p00200 Brassica napus HOM05D000313 ORTHO05D000065 2.1e-09 65.9 91 36.3
C07p05180 Brassica napus HOM05D000313 ORTHO05D000065 2.1e-09 65.9 91 36.3
C04p18580 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-09 65.1 96 39.6
BcaB05g24332 Brassica carinata HOM05D000313 ORTHO05D000065 4.8e-09 64.7 95 36.8
BcaC04g19485 Brassica carinata HOM05D000305 ORTHO05D000065 4.8e-09 64.7 101 36.6
C02p38180 Brassica napus HOM05D000313 ORTHO05D000065 6.2e-09 64.3 99 34.3
C04p23330 Brassica napus HOM05D000313 ORTHO05D000065 6.2e-09 64.3 85 37.6
BcaC06g35232 Brassica carinata HOM05D000313 ORTHO05D000065 8.1e-09 63.9 60 46.7
A09p30460 Brassica napus HOM05D000305 ORTHO05D000065 8.1e-09 63.9 94 36.2
BraA09t38616Z Brassica rapa HOM05D000305 ORTHO05D000065 1.1e-08 63.5 95 35.8
BolC5t31140H Brassica oleracea HOM05D000313 ORTHO05D000065 1.4e-08 63.2 95 37.9
BcaB01g01607 Brassica carinata HOM05D000313 ORTHO05D000065 2.4e-08 62.4 84 41.7
C09p55240 Brassica napus HOM05D000305 ORTHO05D000065 2.4e-08 62.4 94 37.2
C06p14790 Brassica napus HOM05D000305 ORTHO05D000065 4.0e-08 61.6 94 36.2
BolC6t36657H Brassica oleracea HOM05D000305 ORTHO05D000065 4.0e-08 61.6 94 36.2
BraA05t19977Z Brassica rapa HOM05D000313 ORTHO05D000065 9.0e-08 60.5 84 38.1
BcaB02g06416 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-07 60.1 91 38.5
BraA08t32937Z Brassica rapa HOM05D000313 ORTHO05D000065 1.2e-07 60.1 94 34.0
THA.LOC104813725 Tarenaya hassleriana HOM05D000313 ORTHO05D000065 2.0e-07 59.3 65 41.5
BcaC09g50729 Brassica carinata HOM05D000313 ORTHO05D000065 5.8e-07 57.8 83 38.6
BcaNung07285 Brassica carinata HOM05D000313 ORTHO05D000065 7.6e-07 57.4 86 40.7
BcaB05g24352 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-06 56.6 60 43.3
BcaC03g16108 Brassica carinata HOM05D000313 ORTHO05D000065 2.2e-06 55.8 83 34.9
Sp3g27530 Schrenkiella parvula HOM05D000305 ORTHO05D000065 8.4e-06 53.9 82 35.4
Sp3g27550 Schrenkiella parvula HOM05D000305 ORTHO05D000065 8.4e-06 53.9 97 32.0


User provided reference genes

Program Settings