Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g21857 Brassica carinata HOM05D004331 ORTHO05D004984 1.5e-66 256.1 134 100.0
C04p02240 Brassica napus HOM05D004331 ORTHO05D004984 6.7e-64 247.3 134 97.0
BcaC09g50949 Brassica carinata HOM05D004331 ORTHO05D004984 9.7e-63 243.4 134 96.3
C09p26570 Brassica napus HOM05D004331 ORTHO05D004984 9.7e-63 243.4 134 96.3
BolC9t55553H Brassica oleracea HOM05D004331 ORTHO05D004984 9.7e-63 243.4 134 96.3
BcaC02g11378 Brassica carinata HOM05D004331 ORTHO05D004984 2.4e-61 238.8 134 94.0
C04p16400 Brassica napus HOM05D004331 ORTHO05D004984 2.4e-61 238.8 134 94.0
TWI73G1241 Tripterygium wilfordii HOM05D004331 ORTHO05D004984 2.3e-56 222.2 132 84.8
Manes.10G004100 Manihot esculenta HOM05D004331 ORTHO05D004984 8.8e-56 220.3 134 82.8
AT3G56430 Arabidopsis thaliana HOM05D004331 ORTHO05D004984 2.0e-55 219.2 117 94.9
Carub.0005s2321 Capsella rubella HOM05D004331 ORTHO05D004984 5.7e-55 217.6 118 93.2
AL5G37760 Arabidopsis lyrata HOM05D004331 ORTHO05D004984 1.3e-54 216.5 117 94.0
Duzib128G0601 Durio zibethinus HOM05D004331 ORTHO05D004984 1.7e-54 216.1 130 83.8
Ciclev10031884m.g Citrus clementina HOM05D004331 ORTHO05D004984 1.1e-53 213.4 130 83.1
Cpa.g.sc19.35 Carica papaya HOM05D004331 ORTHO05D004984 2.4e-53 212.2 131 82.4
Peaxi162Scf00073g02119 Petunia axillaris HOM05D004331 ORTHO05D004984 3.1e-53 211.8 133 81.2
TAR636G1774 Trochodendron aralioides HOM05D004331 ORTHO05D004984 3.1e-53 211.8 132 81.1
Nitab4.5_0009756g0010 Nicotiana tabacum HOM05D004331 ORTHO05D004984 5.4e-53 211.1 133 79.7
BcaC02g12734 Brassica carinata HOM05D004331 ORTHO05D004984 9.1e-53 210.3 134 85.1
A05p01900 Brassica napus HOM05D004331 ORTHO05D004984 9.1e-53 210.3 134 85.1
BraA05t19188Z Brassica rapa HOM05D004331 ORTHO05D004984 9.1e-53 210.3 134 85.1
CANSAT56G0386 Cannabis sativa HOM05D004331 ORTHO05D004984 9.1e-53 210.3 131 82.4
Sp4g23120 Schrenkiella parvula HOM05D004331 ORTHO05D004984 9.1e-53 210.3 134 85.1
BcaC09g50388 Brassica carinata HOM05D004331 ORTHO05D004984 1.6e-52 209.5 134 84.3
BolC4t21871H Brassica oleracea HOM05D004331 ORTHO05D004984 1.6e-52 209.5 107 97.2
Sp5g06060 Schrenkiella parvula HOM05D004331 ORTHO05D004984 5.9e-52 207.6 133 83.5
BolC1t02551H Brassica oleracea HOM05D004331 ORTHO05D004984 7.7e-52 207.2 134 83.6
Thhalv10016808m.g Eutrema salsugineum HOM05D004331 ORTHO05D004984 1.3e-51 206.5 108 95.4
Aa31LG10G11310 Aethionema arabicum HOM05D004331 ORTHO05D004984 1.7e-51 206.1 113 90.3
MSTRG.156 Avicennia marina HOM05D004331 ORTHO05D004984 2.2e-51 205.7 133 78.2
Dinv34508 Davidia involucrata HOM05D004331 ORTHO05D004984 2.9e-51 205.3 130 78.5
Psat5g069640 Pisum sativum HOM05D004331 ORTHO05D004984 5.0e-51 204.5 132 78.8
C01p26060 Brassica napus HOM05D004331 ORTHO05D004984 8.5e-51 203.8 134 82.8
ClCG11G005520 Citrullus lanatus HOM05D004331 ORTHO05D004984 8.5e-51 203.8 131 80.9
AT2G40800 Arabidopsis thaliana HOM05D004331 ORTHO05D004984 1.1e-50 203.4 134 82.1
CiPaw.01G307700 Carya illinoinensis HOM05D004331 ORTHO05D004984 1.5e-50 203.0 133 78.2
CARHR135900 Cardamine hirsuta HOM05D004331 ORTHO05D004984 2.5e-50 202.2 134 81.3
SGA_v2.0_scaffold397G50761 Striga asiatica HOM05D004331 ORTHO05D004984 4.2e-50 201.4 129 78.3
CARHR166560 Cardamine hirsuta HOM05D004331 ORTHO05D004984 5.5e-50 201.1 106 93.4
Migut.F00564 Erythranthe guttata HOM05D004331 ORTHO05D004984 2.1e-49 199.1 134 77.6
Duzib114G0903 Durio zibethinus HOM05D004331 ORTHO05D004984 2.7e-49 198.7 133 76.7
HanXRQChr07g0204811 Helianthus annuus HOM05D004331 ORTHO05D004984 2.7e-49 198.7 134 74.6
Sc11g0006070 Simmondsia chinensis HOM05D004331 ORTHO05D004984 2.7e-49 198.7 131 74.0
AL4G38690 Arabidopsis lyrata HOM05D004331 ORTHO05D004984 3.6e-49 198.4 134 80.6
Thhalv10006036m.g Eutrema salsugineum HOM05D004331 ORTHO05D004984 4.7e-49 198.0 106 92.5
Hund13431 Selenicereus undatus HOM05D004331 ORTHO05D004984 1.0e-48 196.8 133 75.2
THA.LOC104814366 Tarenaya hassleriana HOM05D004331 ORTHO05D004984 2.3e-48 195.7 108 88.0
Sed0000286 Sechium edule HOM05D004331 ORTHO05D004984 3.0e-48 195.3 130 78.5
Medtr3g093690 Medicago truncatula HOM05D004331 ORTHO05D004984 6.8e-48 194.1 133 72.9
C08p31740 Brassica napus HOM05D004331 ORTHO05D004984 8.8e-48 193.7 103 92.2
C01p18940 Brassica napus HOM05D004331 ORTHO05D004984 2.6e-47 192.2 102 93.1
BolC1t01820H Brassica oleracea HOM05D004331 ORTHO05D004984 2.6e-47 192.2 102 93.1
BolC8t50795H Brassica oleracea HOM05D004331 ORTHO05D004984 3.4e-47 191.8 103 91.3
MD01G1171000 Malus domestica HOM05D004331 ORTHO05D004984 3.4e-47 191.8 102 91.2
A09p49380 Brassica napus HOM05D004331 ORTHO05D004984 4.4e-47 191.4 103 91.3
BraA09t40391Z Brassica rapa HOM05D004331 ORTHO05D004984 4.4e-47 191.4 103 91.3
Lalb_Chr11g0067651 Lupinus albus HOM05D004331 ORTHO05D004984 5.7e-47 191.0 112 83.0
C03p81590 Brassica napus HOM05D004331 ORTHO05D004984 9.8e-47 190.3 106 97.2
BolC3t20429H Brassica oleracea HOM05D004331 ORTHO05D004984 9.8e-47 190.3 106 97.2
THA.LOC104824369 Tarenaya hassleriana HOM05D004331 ORTHO05D004984 9.8e-47 190.3 104 87.5
Oeu039397.2 Olea europaea HOM05D004331 ORTHO05D004984 1.3e-46 189.9 133 73.7
Ca_16853_v3 Cicer arietinum L. HOM05D004331 ORTHO05D004984 2.8e-46 188.7 141 70.2
Ca_29501_v3 Cicer arietinum L. HOM05D004331 ORTHO05D004984 2.8e-46 188.7 141 70.2
arahy.Tifrunner.gnm1.ann1.J1TSCZ Arachis hypogaea HOM05D004331 ORTHO05D004984 4.9e-46 188.0 105 84.8
arahy.Tifrunner.gnm1.ann1.M9I45E Arachis hypogaea HOM05D004331 ORTHO05D004984 4.9e-46 188.0 105 84.8
VMungo1309G0248 Vigna mungo HOM05D004331 ORTHO05D004984 6.3e-46 187.6 134 72.4
Phvul.009G042200 Phaseolus vulgaris HOM05D004331 ORTHO05D004984 1.1e-45 186.8 106 84.9
Sabra19G0075700 Salix brachista HOM05D004331 ORTHO05D004984 1.4e-45 186.4 107 85.0
Sabra19G0081100 Salix brachista HOM05D004331 ORTHO05D004984 1.4e-45 186.4 107 85.0
TPR.G13966 Trifolium pratense HOM05D004331 ORTHO05D004984 3.1e-45 185.3 140 68.6
BcaC01g00580 Brassica carinata HOM05D003032 ORTHO05D003456 4.1e-45 184.9 106 94.3
CsaV3_5G039270 Cucumis sativus L. HOM05D004331 ORTHO05D004984 4.1e-45 184.9 108 84.3
Dinv21866 Davidia involucrata HOM05D004331 ORTHO05D004984 4.1e-45 184.9 112 79.5
Gohir.D10G184000 Gossypium hirsutum HOM05D004331 ORTHO05D004984 5.4e-45 184.5 105 85.7
Gorai.011G206200 Gossypium raimondii HOM05D004331 ORTHO05D004984 5.4e-45 184.5 105 85.7
MD07G1237400 Malus domestica HOM05D004331 ORTHO05D004984 5.4e-45 184.5 101 87.1
RcHm_v2.0_Chr1g0372681 Rosa chinensis HOM05D004331 ORTHO05D004984 5.4e-45 184.5 105 84.8
FvH4_7g26230 Fragaria vesca HOM05D004331 ORTHO05D004984 7.0e-45 184.1 104 85.6
FAN06G3213 Fragaria x ananassa HOM05D004331 ORTHO05D004984 7.0e-45 184.1 104 85.6
FAN10G3590 Fragaria x ananassa HOM05D004331 ORTHO05D004984 7.0e-45 184.1 104 85.6
FAN01G2544 Fragaria x ananassa HOM05D004331 ORTHO05D004984 9.1e-45 183.7 104 85.6
MBI15_g36678_MAGBIO Magnolia biondii HOM05D004331 ORTHO05D004984 9.1e-45 183.7 130 73.1
Potri.019G062200 Populus trichocarpa HOM05D004331 ORTHO05D004984 1.2e-44 183.3 101 86.1
QL08p065166 Quercus lobata HOM05D004331 ORTHO05D004984 1.2e-44 183.3 102 85.3
Atru.chr12.214 Acer truncatum HOM05D004331 ORTHO05D004984 3.5e-44 181.8 101 85.1
Ah.10g029610 Amaranthus hybridus HOM05D000033 ORTHO05D000913 4.5e-44 181.4 127 70.1
Cfa001189 Carpinus fangiana HOM05D004331 ORTHO05D004984 7.7e-44 180.6 101 85.1
PGR142G0580 Punica granatum HOM05D004331 ORTHO05D004984 7.7e-44 180.6 101 83.2
GSVIVG01032862001 Vitis vinifera HOM05D004331 ORTHO05D004984 7.7e-44 180.6 101 83.2
Glyma.06G141000 Glycine max HOM05D004331 ORTHO05D004984 1.0e-43 180.3 101 82.2
Eucgr.L02349 Eucalyptus grandis HOM05D004331 ORTHO05D004984 1.3e-43 179.9 101 82.2
Haze_17376 Corylus avellana HOM05D004331 ORTHO05D004984 2.9e-43 178.7 101 84.2
MELO3C022105.2 Cucumis melo HOM05D004331 ORTHO05D004984 3.8e-43 178.3 101 85.1
Gohir.A10G177400 Gossypium hirsutum HOM05D004331 ORTHO05D004984 5.0e-43 177.9 101 85.1
Sopen03g025450 Solanum pennellii HOM05D004331 ORTHO05D004984 1.1e-42 176.8 105 80.0
CSS0028422 Camellia sinensis var. sinensis HOM05D004331 ORTHO05D004984 1.9e-42 176.0 107 78.5
Eucgr.G03152 Eucalyptus grandis HOM05D004331 ORTHO05D004984 1.9e-42 176.0 101 81.2
Glyma.04G223900 Glycine max HOM05D004331 ORTHO05D004984 1.9e-42 176.0 101 80.2
Thecc.10G186200 Theobroma cacao HOM05D004331 ORTHO05D004984 1.9e-42 176.0 102 84.3
Solyc03g095470.3 Solanum lycopersicum HOM05D004331 ORTHO05D004984 2.5e-42 175.6 105 79.0
SGA_v2.0_scaffold60G20876 Striga asiatica HOM05D004331 ORTHO05D004984 2.5e-42 175.6 120 74.2
Lj1A969T93 Lonicera japonica HOM05D004331 ORTHO05D004984 5.6e-42 174.5 133 67.7
PGSC0003DMG400005253 Solanum tuberosum HOM05D004331 ORTHO05D004984 5.6e-42 174.5 102 81.4
Nn5g26801 Nelumbo nucifera HOM05D004331 ORTHO05D004984 9.5e-42 173.7 130 68.5
Cc02_g05110 Coffea canephora HOM05D004331 ORTHO05D004984 2.1e-41 172.6 102 80.4
COL.COLO4_19485 Corchorus olitorius HOM05D004331 ORTHO05D004984 2.1e-41 172.6 101 83.2
Lj1g0025811 Lotus japonicus HOM05D004331 ORTHO05D004984 2.1e-41 172.6 133 66.2
SalBow3G0869 Salvia bowleyana HOM05D004331 ORTHO05D004984 4.7e-41 171.4 105 78.1
SEGI_36006 Sequoiadendron giganteum HOM05D004331 ORTHO05D004984 4.7e-41 171.4 131 67.9
Actinidia01013 Actinidia chinensis HOM05D004331 ORTHO05D004984 6.1e-41 171.0 102 80.4
Actinidia07780 Actinidia chinensis HOM05D004331 ORTHO05D004984 8.0e-41 170.6 113 76.1
Os01g0168300 Oryza sativa ssp. japonica HOM05D004331 ORTHO05D004984 8.0e-41 170.6 112 75.9
PSO017G4126 Papaver somniferum HOM05D004331 ORTHO05D004984 1.0e-40 170.2 137 67.2
vmacro09950 Vaccinium macrocarpon HOM05D004331 ORTHO05D004984 1.4e-40 169.9 102 76.5
AUR62030578 Chenopodium quinoa HOM05D004331 ORTHO05D004984 2.3e-40 169.1 108 75.0
EL10Ac2g02684 Beta vulgaris HOM05D004331 ORTHO05D004984 4.0e-40 168.3 131 66.4
DCAR_020157 Daucus carota HOM05D004331 ORTHO05D004984 4.0e-40 168.3 102 77.5
AUR62032546 Chenopodium quinoa HOM05D004331 ORTHO05D004984 5.2e-40 167.9 108 74.1
ATR1127G084 Amborella trichopoda HOM05D004331 ORTHO05D004984 6.8e-40 167.5 132 65.9
Zm00001eb336450 Zea mays HOM05D004331 ORTHO05D004984 6.8e-40 167.5 108 75.9
Lalb_Chr08g0239281 Lupinus albus HOM05D004331 ORTHO05D004984 1.2e-39 166.8 141 65.2
CAN.G30.2 Capsicum annuum HOM05D004331 ORTHO05D004984 1.5e-39 166.4 133 67.7
Aqoxy4G03301 Aquilegia oxysepala HOM05D004331 ORTHO05D004984 2.0e-39 166.0 132 65.2
Pp3c7_18440 Physcomitrium patens HOM05D004331 ORTHO05D004984 2.0e-39 166.0 133 63.9
unitig_88.g27825 Utricularia gibba HOM05D004331 ORTHO05D004984 2.6e-39 165.6 108 73.1
Hma1.2p1_0264F.1_g105850 Hydrangea macrophylla HOM05D004331 ORTHO05D004984 5.7e-39 164.5 102 77.5
Lsat_1_v5_gn_2_127600 Lactuca sativa HOM05D004331 ORTHO05D004984 5.7e-39 164.5 134 64.2
HPP92_012570 Vanilla planifolia HOM05D004331 ORTHO05D004984 7.5e-39 164.1 112 74.1
PSO170G2208 Papaver somniferum HOM05D004331 ORTHO05D004984 9.8e-39 163.7 137 64.2
Rhsim09G0186700 Rhododendron simsii HOM05D004331 ORTHO05D004984 3.7e-38 161.8 134 64.2
ECA238G1814 Erigeron canadensis HOM05D004331 ORTHO05D004984 3.2e-37 158.7 134 62.7
BcaC04g23398 Brassica carinata HOM05D004331 ORTHO05D004984 5.4e-37 157.9 134 68.7
Actinidia13632 Actinidia chinensis HOM05D004331 ORTHO05D004984 2.7e-36 155.6 112 74.1
Mapoly0158s0020 Marchantia polymorpha HOM05D004331 ORTHO05D004984 1.0e-35 153.7 107 72.0
Pp3c1_5190 Physcomitrium patens HOM05D004331 ORTHO05D004984 3.3e-34 148.7 133 57.9
AagrBONN_evm.TU.Sc2ySwM_340.90 Anthoceros agrestis HOM05D004331 ORTHO05D004984 2.8e-33 145.6 127 59.8
Manes.03G048500 Manihot esculenta HOM05D004331 ORTHO05D004984 3.6e-33 145.2 108 73.1
CBR_g29882 Chara braunii HOM05D004331 ORTHO05D004984 6.4e-30 134.4 100 64.0
SMO361G0183 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 1.6e-28 129.8 115 58.3
SMO199G0115 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 2.0e-28 129.4 116 57.8
Carub.0004s2310 Capsella rubella HOM05D004331 ORTHO05D004984 1.5e-26 123.2 89 73.0
BcaC07g39957 Brassica carinata HOM05D004331 ORTHO05D004984 1.6e-25 119.8 103 61.2
BolC9t53789H Brassica oleracea HOM05D004331 ORTHO05D004984 6.8e-24 114.4 87 75.9
SMO361G0173 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 4.4e-23 111.7 113 49.6
SMO361G0787 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 4.4e-23 111.7 113 49.6
Prupe.2G266500 Prunus persica HOM05D004331 ORTHO05D004984 1.7e-22 109.8 79 69.6
VMungo0540G1227 Vigna mungo HOM05D004331 ORTHO05D004984 6.4e-22 107.8 82 73.2
HPP92_012539 Vanilla planifolia HOM05D004331 ORTHO05D004984 1.1e-21 107.1 129 54.3
MSTRG.8387 Avicennia marina HOM05D004331 ORTHO05D004984 1.4e-21 106.7 109 56.0
SHI31863 Sapria himalayana HOM05D004331 ORTHO05D004984 3.0e-19 99.0 83 60.2
BraA04t18575Z Brassica rapa HOM05D004331 ORTHO05D016805 5.8e-15 84.7 44 95.5
BolC4t28360H Brassica oleracea HOM05D004331 ORTHO05D004984 1.1e-13 80.5 100 51.0
Nitab4.5_0018056g0010 Nicotiana tabacum HOM05D004331 ORTHO05D004984 1.9e-13 79.7 45 80.0
Aqoxy4G02083 Aquilegia oxysepala HOM05D004331 ORTHO05D004984 5.4e-13 78.2 49 71.4
PRCOL_00001688 Prasinoderma coloniale HOM05D004331 ORTHO05D004984 2.1e-12 76.3 115 39.1
SHI31864 Sapria himalayana HOM05D004331 ORTHO05D004984 2.7e-12 75.9 45 77.8
Cre05.g232752 Chlamydomonas reinhardtii HOM05D004331 ORTHO05D004984 1.7e-11 73.2 152 30.9
CiPaw.02G199300 Carya illinoinensis HOM05D004331 ORTHO05D004984 5.1e-11 71.6 40 77.5


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