Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g21847 Brassica carinata HOM05D009411 ORTHO05D014997 1.9e-80 302.4 142 100.0
C09p26700 Brassica napus HOM05D009411 ORTHO05D014997 4.6e-79 297.7 142 99.3
BolC9t55562H Brassica oleracea HOM05D009411 ORTHO05D014997 3.0e-78 295.0 142 97.9
C07p34600 Brassica napus HOM05D009411 ORTHO05D014997 1.1e-77 293.1 142 97.2
BolC7t43992H Brassica oleracea HOM05D009411 ORTHO05D014997 1.1e-77 293.1 142 97.2
C03p49680 Brassica napus HOM05D009411 ORTHO05D014997 5.3e-75 284.3 142 94.4
BolC3t17266H Brassica oleracea HOM05D009411 ORTHO05D014997 5.3e-75 284.3 142 94.4
BolC1t05558H Brassica oleracea HOM05D009411 ORTHO05D014997 2.4e-67 258.8 142 88.0
A09p13700 Brassica napus HOM05D009411 ORTHO05D014997 5.5e-64 247.7 123 93.5
BraA09t40167Z Brassica rapa HOM05D009411 ORTHO05D014997 5.5e-64 247.7 123 93.5
A09p47020 Brassica napus HOM05D009411 ORTHO05D014997 5.0e-57 224.6 112 92.9
BolC6t37922H Brassica oleracea HOM05D009411 ORTHO05D014997 2.5e-56 222.2 112 95.5
BcaC01g03679 Brassica carinata HOM05D009411 ORTHO05D014997 1.1e-48 196.8 112 85.7
BcaC06g33962 Brassica carinata HOM05D009411 ORTHO05D003352 1.9e-48 196.1 112 85.7
BcaB04g17896 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-42 176.8 112 70.5
A09p23690 Brassica napus HOM05D009411 ORTHO05D014107 2.0e-37 159.5 77 94.8
A03p06230 Brassica napus HOM05D009411 ORTHO05D014107 1.7e-36 156.4 77 92.2
A03p13170 Brassica napus HOM05D009411 ORTHO05D014107 1.7e-36 156.4 77 92.2
BcaB04g18557 Brassica carinata HOM05D003839 ORTHO05D003352 4.7e-31 138.3 75 81.3
BcaB05g21582 Brassica carinata HOM05D003839 ORTHO05D003352 1.0e-30 137.1 75 80.0
BcaC01g02980 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-30 136.7 138 46.4
A04p14650 Brassica napus HOM05D009411 ORTHO05D014107 2.2e-28 129.4 69 85.5
BcaC04g22403 Brassica carinata HOM05D009411 ORTHO05D014107 1.6e-26 123.2 73 75.3
BcaC01g02162 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-25 119.4 138 37.7
BraA04t16148Z Brassica rapa HOM05D009411 ORTHO05D014107 3.8e-25 118.6 82 61.0
Thhalv10005441m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 6.5e-25 117.9 132 40.9
BraA08t34532Z Brassica rapa HOM05D003839 ORTHO05D003352 1.9e-24 116.3 139 38.1
BraA01t01218Z Brassica rapa HOM05D009411 ORTHO05D014107 4.2e-24 115.2 82 59.8
Thhalv10005434m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 2.1e-23 112.8 138 35.5
C04p41030 Brassica napus HOM05D003839 ORTHO05D003352 1.4e-22 110.2 135 36.3
BolC4t25686H Brassica oleracea HOM05D003839 ORTHO05D003352 1.4e-22 110.2 135 36.3
Thhalv10002164m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.4e-22 110.2 123 39.8
BcaB05g24307 Brassica carinata HOM05D003839 ORTHO05D003352 1.8e-22 109.8 135 40.0
A06p18790 Brassica napus HOM05D009411 ORTHO05D014107 4.0e-22 108.6 78 59.0
BraA01t02749Z Brassica rapa HOM05D003839 ORTHO05D003352 4.0e-22 108.6 134 40.3
BraA09t38186Z Brassica rapa HOM05D009411 ORTHO05D014107 4.0e-22 108.6 83 57.8
C05p17950 Brassica napus HOM05D003839 ORTHO05D003352 8.8e-22 107.5 139 38.8
C01p32100 Brassica napus HOM05D009411 ORTHO05D014107 1.2e-21 107.1 80 57.5
A09p20270 Brassica napus HOM05D003839 ORTHO05D003352 2.0e-21 106.3 138 34.1
C09p21410 Brassica napus HOM05D003839 ORTHO05D003352 2.0e-21 106.3 138 32.6
A05p03580 Brassica napus HOM05D003839 ORTHO05D003352 2.6e-21 105.9 139 36.7
BcaB07g31374 Brassica carinata HOM05D003839 ORTHO05D003352 3.4e-21 105.5 133 35.3
BolC6t38134H Brassica oleracea HOM05D003839 ORTHO05D003352 9.8e-21 104.0 135 34.8
BolC8t51019H Brassica oleracea HOM05D003839 ORTHO05D003352 9.8e-21 104.0 136 34.6
BcaB02g06630 Brassica carinata HOM05D003839 ORTHO05D003352 1.7e-20 103.2 135 36.3
BcaB05g23505 Brassica carinata HOM05D003839 ORTHO05D003352 1.7e-20 103.2 135 33.3
C04p53270 Brassica napus HOM05D009411 ORTHO05D014107 2.2e-20 102.8 80 56.2
BolC4t26883H Brassica oleracea HOM05D009411 ORTHO05D014107 2.2e-20 102.8 80 56.2
C08p34220 Brassica napus HOM05D003839 ORTHO05D003352 2.8e-20 102.4 136 34.6
BraA02t07279Z Brassica rapa HOM05D003839 ORTHO05D003352 3.7e-20 102.1 138 32.6
BcaB04g18348 Brassica carinata HOM05D003839 ORTHO05D003352 4.8e-20 101.7 136 37.5
A10p04960 Brassica napus HOM05D009411 ORTHO05D014107 6.3e-20 101.3 76 55.3
A10p16990 Brassica napus HOM05D009411 ORTHO05D014107 6.3e-20 101.3 76 55.3
A09p19700 Brassica napus HOM05D003839 ORTHO05D003352 8.3e-20 100.9 133 33.8
BolC3t20345H Brassica oleracea HOM05D003839 ORTHO05D003352 8.3e-20 100.9 135 35.6
BraA07t28801Z Brassica rapa HOM05D003839 ORTHO05D003352 1.4e-19 100.1 138 32.6
BcaB08g35221 Brassica carinata HOM05D003839 ORTHO05D003352 2.4e-19 99.4 138 32.6
A03p67960 Brassica napus HOM05D003839 ORTHO05D003352 2.4e-19 99.4 133 33.1
C09p23320 Brassica napus HOM05D003839 ORTHO05D003352 2.4e-19 99.4 135 32.6
BcaC06g33695 Brassica carinata HOM05D003839 ORTHO05D003352 4.1e-19 98.6 135 32.6
BcaC09g50233 Brassica carinata HOM05D003839 ORTHO05D003352 4.1e-19 98.6 135 32.6
C03p63070 Brassica napus HOM05D003839 ORTHO05D003352 5.4e-19 98.2 135 32.6
A01p36380 Brassica napus HOM05D003839 ORTHO05D003352 7.0e-19 97.8 134 38.1
BcaB01g01663 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-18 97.1 136 36.8
BcaB06g26196 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-18 97.1 136 35.3
BolC7t43565H Brassica oleracea HOM05D003839 ORTHO05D003352 1.2e-18 97.1 135 33.3
BraA09t40513Z Brassica rapa HOM05D003839 ORTHO05D003352 1.6e-18 96.7 135 35.6
BcaC03g15389 Brassica carinata HOM05D003839 ORTHO05D003352 2.0e-18 96.3 135 33.3
BcaC03g16634 Brassica carinata HOM05D003839 ORTHO05D003352 2.0e-18 96.3 135 33.3
BcaC04g19582 Brassica carinata HOM05D012684 ORTHO05D014107 2.0e-18 96.3 81 55.6
C03p63060 Brassica napus HOM05D003839 ORTHO05D003352 2.0e-18 96.3 135 31.9
BcaB01g00514 Brassica carinata HOM05D003839 ORTHO05D003352 3.5e-18 95.5 135 34.1
BolC5t32306H Brassica oleracea HOM05D003839 ORTHO05D003352 3.5e-18 95.5 135 31.9
BraA02t07902Z Brassica rapa HOM05D003839 ORTHO05D003352 3.5e-18 95.5 135 31.1
BcaB07g32710 Brassica carinata HOM05D003839 ORTHO05D003352 4.5e-18 95.1 135 35.6
BcaC05g27601 Brassica carinata HOM05D003839 ORTHO05D003352 4.5e-18 95.1 135 31.9
C05p35870 Brassica napus HOM05D003839 ORTHO05D003352 4.5e-18 95.1 135 31.9
BcaB02g07569 Brassica carinata HOM05D003839 ORTHO05D003352 5.9e-18 94.7 136 35.3
BolC8t48491H Brassica oleracea HOM05D003839 ORTHO05D003352 5.9e-18 94.7 132 32.6
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 2.9e-17 92.4 132 35.6
BolC5t32063H Brassica oleracea HOM05D000313 ORTHO05D000065 2.9e-17 92.4 132 35.6
BcaB01g01517 Brassica carinata HOM05D003839 ORTHO05D003352 6.5e-17 91.3 132 34.1
BcaC04g22402 Brassica carinata HOM05D040257 ORTHO05D032373 1.1e-16 90.5 45 86.7
A02p28670 Brassica napus HOM05D003839 ORTHO05D003352 1.1e-16 90.5 135 30.4
BolC9t54875H Brassica oleracea HOM05D003839 ORTHO05D019911 1.1e-16 90.5 45 86.7
C02p27640 Brassica napus HOM05D003839 ORTHO05D003352 1.9e-16 89.7 125 32.8
C04p33340 Brassica napus HOM05D003839 ORTHO05D003352 1.9e-16 89.7 135 29.6
BcaB01g02875 Brassica carinata HOM05D003839 ORTHO05D003352 3.3e-16 89.0 133 34.6
BraA01t03014Z Brassica rapa HOM05D003839 ORTHO05D003352 4.2e-16 88.6 104 40.4
AL8G28420 Arabidopsis lyrata HOM05D003839 ORTHO05D003352 7.2e-16 87.8 137 30.7
BcaB06g27258 Brassica carinata HOM05D003839 ORTHO05D003352 7.2e-16 87.8 133 33.8
AL4G17890 Arabidopsis lyrata HOM05D003839 ORTHO05D003352 1.2e-15 87.0 137 30.7
BcaB03g16839 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-15 87.0 133 33.8
BcaB07g32949 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-15 87.0 133 33.8
BcaB04g17113 Brassica carinata HOM05D003839 ORTHO05D003352 1.6e-15 86.7 134 33.6
C06p50270 Brassica napus HOM05D003839 ORTHO05D003352 1.6e-15 86.7 135 28.9
BcaC03g15184 Brassica carinata HOM05D003839 ORTHO05D003352 2.1e-15 86.3 135 31.9
C03p57520 Brassica napus HOM05D014297 ORTHO05D019911 2.8e-15 85.9 79 49.4
BcaB07g32609 Brassica carinata HOM05D003839 ORTHO05D003352 3.6e-15 85.5 134 33.6
BcaC08g44872 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-14 83.6 138 32.6
A03p53820 Brassica napus HOM05D000943 ORTHO05D002475 1.4e-14 83.6 132 33.3
AT5G17167 Arabidopsis thaliana HOM05D003839 ORTHO05D003352 1.8e-14 83.2 138 30.4
BcaB03g16489 Brassica carinata HOM05D003839 ORTHO05D003352 1.8e-14 83.2 133 33.1
A05p17610 Brassica napus HOM05D003839 ORTHO05D003352 1.8e-14 83.2 104 38.5
C05p53690 Brassica napus HOM05D009411 ORTHO05D003352 1.8e-14 83.2 101 41.6
BcaC05g25843 Brassica carinata HOM05D003839 ORTHO05D003352 2.3e-14 82.8 139 32.4
C03p73920 Brassica napus HOM05D009411 ORTHO05D097057 4.0e-14 82.0 40 92.5
BcaC04g22280 Brassica carinata HOM05D003839 ORTHO05D003352 5.2e-14 81.6 138 28.3
A05p21290 Brassica napus HOM05D003839 ORTHO05D003352 1.2e-13 80.5 137 30.7
BraA05t21037Z Brassica rapa HOM05D003839 ORTHO05D003352 1.2e-13 80.5 137 30.7
C02p44490 Brassica napus HOM05D003839 ORTHO05D003352 1.5e-13 80.1 109 37.6
BcaC04g22104 Brassica carinata HOM05D003839 ORTHO05D003352 5.7e-13 78.2 135 29.6
BcaC06g36011 Brassica carinata HOM05D003839 ORTHO05D003352 5.7e-13 78.2 135 28.9
C06p24070 Brassica napus HOM05D018430 ORTHO05D020143 5.7e-13 78.2 102 37.3
BcaNung02469 Brassica carinata HOM05D003839 ORTHO05D003352 1.3e-12 77.0 105 37.1
C02p27160 Brassica napus HOM05D003839 ORTHO05D003352 1.3e-12 77.0 135 28.1
C07p40670 Brassica napus HOM05D003839 ORTHO05D003352 1.3e-12 77.0 105 37.1
BraA09t36993Z Brassica rapa HOM05D010997 ORTHO05D014498 1.3e-12 77.0 144 28.5
Thhalv10003316m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.7e-12 76.6 92 39.1
BcaB04g17804 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-12 76.3 101 31.7
C09p49180 Brassica napus HOM05D003839 ORTHO05D003352 2.2e-12 76.3 135 26.7
BraA02t07568Z Brassica rapa HOM05D008292 ORTHO05D003352 4.9e-12 75.1 88 40.9
BcaB01g00721 Brassica carinata HOM05D003839 ORTHO05D003352 8.3e-12 74.3 124 33.1
C02p23500 Brassica napus HOM05D010997 ORTHO05D014498 8.3e-12 74.3 144 27.8
C07p23690 Brassica napus HOM05D010997 ORTHO05D014498 1.1e-11 73.9 144 27.8
BcaC03g17189 Brassica carinata HOM05D003839 ORTHO05D003352 3.1e-11 72.4 92 38.0
BcaC08g44791 Brassica carinata HOM05D003839 ORTHO05D003352 5.4e-11 71.6 100 36.0
C05p11490 Brassica napus HOM05D010997 ORTHO05D014498 5.4e-11 71.6 155 27.1
BolC2t09048H Brassica oleracea HOM05D003839 ORTHO05D003352 7.0e-11 71.2 135 27.4
C02p33960 Brassica napus HOM05D003839 ORTHO05D003352 2.0e-10 69.7 74 45.9
BolC9t57767H Brassica oleracea HOM05D003839 ORTHO05D003352 2.0e-10 69.7 135 27.4
BcaB06g26804 Brassica carinata HOM05D003839 ORTHO05D003352 7.8e-10 67.8 76 43.4
C02p24590 Brassica napus HOM05D003839 ORTHO05D003352 1.7e-09 66.6 85 40.0
BcaB06g26117 Brassica carinata HOM05D003839 ORTHO05D003352 5.0e-09 65.1 86 36.0
A03p53810 Brassica napus HOM05D000357 ORTHO05D000242 5.0e-09 65.1 94 36.2
BcaB04g17572 Brassica carinata HOM05D003839 ORTHO05D003352 6.6e-09 64.7 73 43.8
BcaB02g06628 Brassica carinata HOM05D009411 ORTHO05D021732 8.6e-09 64.3 78 33.3
C03p32250 Brassica napus HOM05D008292 ORTHO05D003352 8.6e-09 64.3 138 21.0
BolC6t35618H Brassica oleracea HOM05D003839 ORTHO05D003352 1.1e-08 63.9 75 44.0
A05p21770 Brassica napus HOM05D003839 ORTHO05D003352 1.9e-08 63.2 84 35.7
BraA05t21098Z Brassica rapa HOM05D003839 ORTHO05D003352 1.9e-08 63.2 84 35.7
BcaNung06308 Brassica carinata HOM05D008292 ORTHO05D003352 7.3e-08 61.2 138 20.3
Thhalv10003388m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 7.3e-08 61.2 67 43.3
BcaB06g27608 Brassica carinata HOM05D003839 ORTHO05D021732 1.2e-07 60.5 79 29.1
BcaC02g10611 Brassica carinata HOM05D003839 ORTHO05D003352 1.6e-07 60.1 89 36.0
BolC2t10492H Brassica oleracea HOM05D003839 ORTHO05D003352 1.6e-07 60.1 75 42.7
BcaC05g25845 Brassica carinata HOM05D003839 ORTHO05D003352 2.8e-07 59.3 82 31.7
BcaB05g23330 Brassica carinata HOM05D003839 ORTHO05D003352 4.7e-07 58.5 61 41.0
BcaC05g29665 Brassica carinata HOM05D008883 ORTHO05D011075 6.1e-07 58.2 130 27.7
C08p54100 Brassica napus HOM05D008883 ORTHO05D011075 6.1e-07 58.2 130 27.7
BolC8t52918H Brassica oleracea HOM05D008883 ORTHO05D011075 6.1e-07 58.2 130 27.7
BcaNung06257 Brassica carinata HOM05D014297 ORTHO05D019911 8.0e-07 57.8 48 54.2
C01p35470 Brassica napus HOM05D003839 ORTHO05D021732 1.0e-06 57.4 68 33.8
C03p67990 Brassica napus HOM05D003839 ORTHO05D003352 1.0e-06 57.4 62 43.5
BolC1t03505H Brassica oleracea HOM05D003839 ORTHO05D021732 1.0e-06 57.4 68 33.8
BcaC03g17190 Brassica carinata HOM05D003839 ORTHO05D003352 1.8e-06 56.6 66 42.4
BcaC07g40307 Brassica carinata HOM05D007092 ORTHO05D008947 3.0e-06 55.8 76 28.9
BcaB07g31055 Brassica carinata HOM05D003839 ORTHO05D003352 4.0e-06 55.5 64 39.1
A04p07260 Brassica napus HOM05D003839 ORTHO05D003352 5.2e-06 55.1 61 42.6
BraA04t16421Z Brassica rapa HOM05D003839 ORTHO05D003352 5.2e-06 55.1 61 42.6
C04p25750 Brassica napus HOM05D003839 ORTHO05D003352 8.9e-06 54.3 62 45.2


User provided reference genes

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