Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g21726 Brassica carinata HOM05D000357 ORTHO05D039742 1.0e-28 129.4 66 100.0
BcaC02g11692 Brassica carinata HOM05D000357 ORTHO05D039742 1.5e-27 125.6 66 97.0
C04p12290 Brassica napus HOM05D000666 ORTHO05D001431 9.4e-27 122.9 64 98.4
C09p28260 Brassica napus HOM05D000666 ORTHO05D001431 3.0e-25 117.9 60 100.0
BolC1t05193H Brassica oleracea HOM05D000357 ORTHO05D000242 2.4e-14 81.6 55 69.1
BcaC05g29253 Brassica carinata HOM05D000357 ORTHO05D000242 7.0e-14 80.1 55 70.9
C05p55320 Brassica napus HOM05D000357 ORTHO05D000242 7.0e-14 80.1 55 70.9
BolC5t34197H Brassica oleracea HOM05D000357 ORTHO05D000242 7.0e-14 80.1 55 70.9
Thhalv10021683m.g Eutrema salsugineum HOM05D000357 ORTHO05D000242 1.6e-13 79.0 55 69.1
Sp3g10770 Schrenkiella parvula HOM05D000357 ORTHO05D000242 1.6e-13 79.0 55 69.1
BNapus_Darmor_BZH_scaffold_149p00160 Brassica napus HOM05D000357 ORTHO05D000242 2.0e-13 78.6 55 67.3
C01p52540 Brassica napus HOM05D000357 ORTHO05D000242 2.0e-13 78.6 55 67.3
Carub.0003s1198 Capsella rubella HOM05D000357 ORTHO05D000242 5.9e-13 77.0 62 59.7
BcaB04g21049 Brassica carinata HOM05D000357 ORTHO05D000242 1.0e-12 76.3 63 60.3
A05p36860 Brassica napus HOM05D000357 ORTHO05D000242 1.0e-12 76.3 55 67.3
BraA05t22487Z Brassica rapa HOM05D000357 ORTHO05D000242 1.0e-12 76.3 55 67.3
BraA01t04120Z Brassica rapa HOM05D000357 ORTHO05D000242 2.3e-12 75.1 55 65.5
BcaB06g25528 Brassica carinata HOM05D000357 ORTHO05D000242 1.5e-11 72.4 56 67.9
CARHR087140 Cardamine hirsuta HOM05D000357 ORTHO05D000242 2.5e-11 71.6 55 63.6
AL3G24300 Arabidopsis lyrata HOM05D000357 ORTHO05D000242 5.6e-11 70.5 63 54.0
AT3G12630 Arabidopsis thaliana HOM05D000357 ORTHO05D000242 1.6e-10 68.9 64 54.7
BcaB04g18711 Brassica carinata HOM05D000357 ORTHO05D000242 2.1e-10 68.6 56 60.7
BcaC01g04021 Brassica carinata HOM05D000357 ORTHO05D000242 2.1e-10 68.6 56 60.7
A03p37720 Brassica napus HOM05D000357 ORTHO05D000242 1.4e-09 65.9 62 58.1
BraA03t12927Z Brassica rapa HOM05D000357 ORTHO05D000242 2.3e-09 65.1 62 56.5
BcaC05g24347 Brassica carinata HOM05D000357 ORTHO05D000242 6.8e-09 63.5 57 57.9
C05p04040 Brassica napus HOM05D000357 ORTHO05D000242 6.8e-09 63.5 57 57.9
BolC3t16852H Brassica oleracea HOM05D000357 ORTHO05D000242 6.8e-09 63.5 57 59.6
BolC4t22198H Brassica oleracea HOM05D000357 ORTHO05D000242 8.9e-09 63.2 57 57.9
BcaC01g04023 Brassica carinata HOM05D000357 ORTHO05D000242 1.2e-08 62.8 57 57.9
C03p45770 Brassica napus HOM05D000357 ORTHO05D000242 1.2e-08 62.8 57 57.9
BolC5t29182H Brassica oleracea HOM05D000357 ORTHO05D000242 1.5e-08 62.4 57 56.1


User provided reference genes

Program Settings