Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g21670 Brassica carinata HOM05D000496 ORTHO05D011778 1.2e-113 413.3 219 100.0
BcaC06g35985 Brassica carinata HOM05D000496 ORTHO05D027087 9.3e-55 217.6 194 68.0
BcaC02g11189 Brassica carinata HOM05D000496 ORTHO05D011778 1.2e-54 217.2 134 86.6
BcaC04g20980 Brassica carinata HOM05D000496 ORTHO05D027087 5.9e-41 171.8 189 59.8
BcaC03g13801 Brassica carinata HOM05D000496 ORTHO05D000411 3.6e-38 162.5 150 65.3
BcaC07g37410 Brassica carinata HOM05D003678 ORTHO05D004340 3.7e-35 152.5 163 57.7
BcaC04g20755 Brassica carinata HOM05D000496 ORTHO05D000411 5.3e-34 148.7 194 53.6
BcaC01g02809 Brassica carinata HOM05D000496 ORTHO05D027087 7.5e-28 128.3 217 43.3
BcaC06g34907 Brassica carinata HOM05D037950 ORTHO05D011778 2.7e-25 119.8 119 62.2
BcaC06g34642 Brassica carinata HOM05D000496 ORTHO05D015464 5.0e-24 115.5 166 47.0
BcaC02g11007 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-23 113.2 146 49.3
BcaC08g43573 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-23 112.5 133 51.1
BcaC07g37689 Brassica carinata HOM05D000496 ORTHO05D000411 9.4e-23 111.3 133 48.1
BcaC09g49845 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-22 110.9 133 47.4
BcaC07g38017 Brassica carinata HOM05D000496 ORTHO05D015464 1.6e-22 110.5 167 44.3
BcaC01g02914 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-22 110.2 163 45.4
BcaC08g45526 Brassica carinata HOM05D000496 ORTHO05D000411 3.6e-22 109.4 136 48.5
BcaC01g02355 Brassica carinata HOM05D000496 ORTHO05D000411 4.7e-22 109.0 145 43.4
BcaC03g16224 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-21 106.7 155 45.2
BcaC04g21077 Brassica carinata HOM05D000496 ORTHO05D000411 4.0e-21 105.9 135 48.9
BolC9t55287H Brassica oleracea HOM05D000496 ORTHO05D000411 4.4e-20 102.4 130 43.8
BcaC01g02246 Brassica carinata HOM05D000496 ORTHO05D000411 5.7e-20 102.1 133 45.1
BcaC06g35199 Brassica carinata HOM05D000496 ORTHO05D000411 7.5e-20 101.7 129 45.0
BcaC04g20694 Brassica carinata HOM05D000496 ORTHO05D000411 9.8e-20 101.3 116 49.1
BcaC02g10863 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-19 100.5 130 51.5
BcaC02g10623 Brassica carinata HOM05D003757 ORTHO05D004892 3.7e-19 99.4 145 40.7
BcaC03g16547 Brassica carinata HOM05D000496 ORTHO05D000411 6.3e-19 98.6 132 45.5
BcaC02g09713 Brassica carinata HOM05D000496 ORTHO05D000411 8.3e-19 98.2 152 39.5
BcaC03g16322 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-18 97.8 123 45.5
BcaC03g16549 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-18 97.1 123 43.9
BcaC06g34940 Brassica carinata HOM05D000496 ORTHO05D000411 5.4e-18 95.5 143 46.9
BcaC02g11190 Brassica carinata HOM05D000496 ORTHO05D031866 1.6e-17 94.0 140 47.9
BcaC04g20748 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-17 94.0 141 47.5
BcaC08g43740 Brassica carinata HOM05D000496 ORTHO05D000411 5.9e-17 92.0 154 40.9
BcaC04g20746 Brassica carinata HOM05D011171 ORTHO05D000411 7.7e-17 91.7 120 45.8
BcaB05g24301 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-16 90.5 157 43.3
BcaC03g16675 Brassica carinata HOM05D000496 ORTHO05D015464 2.2e-16 90.1 113 50.4
BcaC05g27057 Brassica carinata HOM05D000625 ORTHO05D000467 2.9e-16 89.7 137 45.3
BcaB03g16449 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-15 87.8 170 38.2
BcaC06g36038 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-15 86.3 163 40.5
BcaB05g23634 Brassica carinata HOM05D000496 ORTHO05D000411 5.5e-15 85.5 96 54.2
BcaC03g15779 Brassica carinata HOM05D001075 ORTHO05D001779 1.2e-14 84.3 139 46.0
BcaC06g35802 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-14 84.0 192 33.3
BcaB05g22924 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-14 83.6 156 41.0
BcaC03g16259 Brassica carinata HOM05D000496 ORTHO05D000166 4.7e-14 82.4 114 45.6
BcaB05g23868 Brassica carinata HOM05D000496 ORTHO05D016019 1.0e-13 81.3 153 39.2
BcaC07g37489 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-13 81.3 134 44.8
BcaC03g16876 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-13 80.9 122 47.5
C04p24340 Brassica napus HOM05D000496 ORTHO05D015464 1.4e-13 80.9 71 60.6
BcaC02g10431 Brassica carinata HOM05D000496 ORTHO05D092068 2.3e-13 80.1 100 45.0
BcaC04g21026 Brassica carinata HOM05D045545 ORTHO05D039694 3.0e-13 79.7 90 52.2
BcaC03g16223 Brassica carinata HOM05D000496 ORTHO05D015464 5.2e-13 79.0 109 44.0
BcaC07g37384 Brassica carinata HOM05D000496 ORTHO05D015464 5.2e-13 79.0 158 41.8
A09p25190 Brassica napus HOM05D000496 ORTHO05D024139 5.2e-13 79.0 207 34.3
BcaC04g21545 Brassica carinata HOM05D000496 ORTHO05D000411 8.8e-13 78.2 185 34.1
BcaC04g19988 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-12 77.0 110 45.5
BcaC04g20955 Brassica carinata HOM05D000496 ORTHO05D015483 3.4e-12 76.3 117 44.4
BcaC04g20907 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-12 75.9 148 37.8
BcaC05g27332 Brassica carinata HOM05D000048 ORTHO05D000411 4.4e-12 75.9 160 40.0
BcaC06g35367 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-12 75.9 131 43.5
C06p19990 Brassica napus HOM05D000496 ORTHO05D000411 4.4e-12 75.9 120 42.5
C09p38100 Brassica napus HOM05D000496 ORTHO05D000411 4.4e-12 75.9 148 37.8
BolC9t56588H Brassica oleracea HOM05D000496 ORTHO05D000411 4.4e-12 75.9 150 38.7
BolC9t56646H Brassica oleracea HOM05D000496 ORTHO05D000411 4.4e-12 75.9 148 37.8
BraA05t22059Z Brassica rapa HOM05D000496 ORTHO05D024139 4.4e-12 75.9 149 38.9
BcaB01g01355 Brassica carinata HOM05D000496 ORTHO05D000411 7.5e-12 75.1 67 61.2
BcaC04g21033 Brassica carinata HOM05D000496 ORTHO05D000411 9.8e-12 74.7 152 38.2
BcaC03g14287 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-11 73.9 135 42.2
BcaC02g10608 Brassica carinata HOM05D000496 ORTHO05D000411 6.3e-11 72.0 156 37.8
BolC2t08410H Brassica oleracea HOM05D000496 ORTHO05D000411 6.3e-11 72.0 183 33.3
BcaC05g27111 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-10 70.5 81 49.4
BcaC07g38447 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-10 70.5 158 38.6
BolC2t10890H Brassica oleracea HOM05D000496 ORTHO05D000411 1.8e-10 70.5 170 34.1
BolC9t58039H Brassica oleracea HOM05D000496 ORTHO05D024139 1.8e-10 70.5 149 36.9
BolC9t55245H Brassica oleracea HOM05D000165 ORTHO05D001328 4.1e-10 69.3 189 32.3
BcaC03g16461 Brassica carinata HOM05D000496 ORTHO05D015464 5.4e-10 68.9 71 54.9
BcaC06g36009 Brassica carinata HOM05D000496 ORTHO05D027068 9.2e-10 68.2 141 38.3
BcaC07g37437 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-09 67.8 184 32.6
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 1.6e-09 67.4 51 64.7
BcaC08g43794 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-09 67.0 177 35.6
BcaB01g01424 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-09 66.6 179 34.6
BraA05t20535Z Brassica rapa HOM05D000073 ORTHO05D000033 4.5e-09 65.9 93 41.9
BcaC05g27445 Brassica carinata HOM05D000496 ORTHO05D000411 5.9e-09 65.5 184 34.8
BcaC09g50410 Brassica carinata HOM05D000496 ORTHO05D000411 7.8e-09 65.1 125 40.8
BcaB03g16469 Brassica carinata HOM05D025145 ORTHO05D016019 1.7e-08 63.9 122 40.2
BcaC08g44818 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-08 63.2 144 33.3
BcaC01g00852 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-08 62.8 100 45.0
BcaC04g22084 Brassica carinata HOM05D000496 ORTHO05D000411 5.0e-08 62.4 88 39.8
BolC5t32326H Brassica oleracea HOM05D000496 ORTHO05D032758 1.1e-07 61.2 108 40.7
BcaC06g36595 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-07 60.8 89 44.9
BolC7t41893H Brassica oleracea HOM05D000496 ORTHO05D000411 1.9e-07 60.5 138 37.7
A03p67990 Brassica napus HOM05D000496 ORTHO05D024361 3.3e-07 59.7 141 38.3
BcaC05g28189 Brassica carinata HOM05D000496 ORTHO05D000411 4.3e-07 59.3 141 39.7
BcaC01g01334 Brassica carinata HOM05D000496 ORTHO05D031866 5.6e-07 58.9 93 48.4
BcaC05g27615 Brassica carinata HOM05D000496 ORTHO05D032758 5.6e-07 58.9 91 42.9
C05p36020 Brassica napus HOM05D000496 ORTHO05D000411 5.6e-07 58.9 107 40.2
BcaC07g37118 Brassica carinata HOM05D000496 ORTHO05D015464 2.1e-06 57.0 131 36.6
BcaC08g44499 Brassica carinata HOM05D003731 ORTHO05D004429 2.1e-06 57.0 194 30.9
BcaC01g02042 Brassica carinata HOM05D000496 ORTHO05D024361 2.8e-06 56.6 114 41.2
BcaC03g16158 Brassica carinata HOM05D000496 ORTHO05D016019 2.8e-06 56.6 157 34.4
BcaC09g50123 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-06 56.6 152 32.2
BolC1t02804H Brassica oleracea HOM05D000496 ORTHO05D000411 2.8e-06 56.6 152 32.2
BcaC05g27679 Brassica carinata HOM05D000496 ORTHO05D000411 3.6e-06 56.2 97 42.3
C09p39390 Brassica napus HOM05D000496 ORTHO05D000411 3.6e-06 56.2 100 37.0
BolC9t56812H Brassica oleracea HOM05D000496 ORTHO05D000411 3.6e-06 56.2 100 37.0
BcaC04g20747 Brassica carinata HOM05D000496 ORTHO05D000411 4.7e-06 55.8 85 43.5
BcaC02g10503 Brassica carinata HOM05D000496 ORTHO05D000411 6.1e-06 55.5 138 37.7
BcaC04g20777 Brassica carinata HOM05D000496 ORTHO05D000411 6.1e-06 55.5 107 38.3
C01p28770 Brassica napus HOM05D000496 ORTHO05D000411 8.0e-06 55.1 152 32.2


User provided reference genes

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