Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g21553 Brassica carinata HOM05D008835 ORTHO05D011094 5.0e-121 439.1 559 100.0
BolC9t55906H Brassica oleracea HOM05D008835 ORTHO05D011094 3.6e-119 433.0 559 99.1
C09p30430 Brassica napus HOM05D008835 ORTHO05D011094 1.8e-118 430.6 559 98.4
BraA09t37964Z Brassica rapa HOM05D008835 ORTHO05D011094 2.0e-109 400.6 559 95.7
A09p23600 Brassica napus HOM05D008835 ORTHO05D011094 7.5e-109 398.7 559 96.4
Sp2g13190 Schrenkiella parvula HOM05D008835 ORTHO05D011094 4.2e-67 260.0 563 81.5
AT2G01740 Arabidopsis thaliana HOM05D008835 ORTHO05D011094 5.1e-65 253.1 196 73.0
CARHR144310 Cardamine hirsuta HOM05D008835 ORTHO05D011094 3.7e-63 246.9 197 70.1
Thhalv10003932m.g Eutrema salsugineum HOM05D008835 ORTHO05D011094 4.8e-63 246.5 196 70.4
AL5G10840 Arabidopsis lyrata HOM05D008835 ORTHO05D011094 2.0e-61 241.1 196 70.4
Aa31LG2G8150 Aethionema arabicum HOM05D008835 ORTHO05D011094 3.2e-59 233.8 196 67.3
Cpa.g.sc2.190 Carica papaya HOM05D008835 ORTHO05D011094 8.0e-42 176.0 196 49.0
CANSAT01G3131 Cannabis sativa HOM05D008835 ORTHO05D011094 1.1e-38 165.6 197 42.6
Carub.0005s0069 Capsella rubella HOM05D008835 ORTHO05D011094 7.7e-37 159.5 118 65.3
Sc15g0000240 Simmondsia chinensis HOM05D008835 ORTHO05D011094 2.9e-36 157.5 196 48.0
Prupe.1G333800 Prunus persica HOM05D008835 ORTHO05D011094 1.4e-33 148.7 191 52.4
RcHm_v2.0_Chr4g0443001 Rosa chinensis HOM05D008835 ORTHO05D011094 9.8e-32 142.5 194 52.1
Dinv10471 Davidia involucrata HOM05D008835 ORTHO05D011094 3.8e-28 130.6 197 48.7
Cc11_g07380 Coffea canephora HOM05D008835 ORTHO05D011094 5.0e-28 130.2 200 36.0
CSS0047579 Camellia sinensis var. sinensis HOM05D008835 ORTHO05D011094 1.4e-25 122.1 198 42.4
CsaV3_5G014350 Cucumis sativus L. HOM05D008835 ORTHO05D011094 8.8e-25 119.4 196 40.8
Nn4g26594 Nelumbo nucifera HOM05D008835 ORTHO05D011094 3.5e-21 107.5 119 42.9
COL.COLO4_16597 Corchorus olitorius HOM05D002001 ORTHO05D006833 6.6e-20 103.2 189 45.0
Hma1.2p1_0277F.1_g111660 Hydrangea macrophylla HOM05D008835 ORTHO05D011094 4.2e-19 100.5 196 42.3
Hma1.2p1_0277F.1_g111665 Hydrangea macrophylla HOM05D008835 ORTHO05D011094 4.2e-19 100.5 196 42.3
TAR374G1374 Trochodendron aralioides HOM05D008835 ORTHO05D011094 1.2e-18 99.0 91 48.4
Gohir.D01G139800 Gossypium hirsutum HOM05D008835 ORTHO05D011094 1.6e-18 98.6 189 43.9
Gorai.002G171900 Gossypium raimondii HOM05D008835 ORTHO05D011094 1.6e-18 98.6 189 43.9
Sed0018402 Sechium edule HOM05D008835 ORTHO05D011094 3.0e-17 94.4 196 44.4
Gohir.A01G146600 Gossypium hirsutum HOM05D008835 ORTHO05D011094 1.7e-15 88.6 189 41.8
Lj3P864T25 Lonicera japonica HOM05D008835 ORTHO05D011094 4.9e-15 87.0 82 47.6
ClCG07G005540 Citrullus lanatus HOM05D008835 ORTHO05D011094 9.5e-11 72.8 115 33.9
ATR0753G127 Amborella trichopoda HOM05D008835 ORTHO05D011094 2.8e-10 71.2 90 38.9
Actinidia34037 Actinidia chinensis HOM05D008835 ORTHO05D011094 3.6e-10 70.9 51 58.8
RcHm_v2.0_Chr2g0123271 Rosa chinensis HOM05D008835 ORTHO05D011094 1.5e-08 65.5 83 41.0
Cc11_g07320 Coffea canephora HOM05D008835 ORTHO05D011094 3.4e-08 64.3 115 36.5
Thecc.02G293200 Theobroma cacao HOM05D008835 ORTHO05D030527 2.2e-07 61.6 101 34.7
Oeu044008.1 Olea europaea HOM05D008835 ORTHO05D011094 3.2e-06 57.8 56 44.6


User provided reference genes

Program Settings