Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g21549 Brassica carinata HOM05D000675 ORTHO05D000395 5.1e-53 211.1 128 100.0
BcaC07g38048 Brassica carinata HOM05D000675 ORTHO05D013243 9.7e-36 153.7 79 93.7
BolC8t48443H Brassica oleracea HOM05D000675 ORTHO05D013243 9.7e-36 153.7 78 94.9
BcaC05g26973 Brassica carinata HOM05D000675 ORTHO05D013243 1.1e-31 140.2 79 87.3
C05p28300 Brassica napus HOM05D000675 ORTHO05D013243 1.1e-28 130.2 79 84.8
C06p33690 Brassica napus HOM05D000675 ORTHO05D000395 1.3e-24 116.7 93 65.6
BcaC09g49238 Brassica carinata HOM05D000675 ORTHO05D020104 1.2e-22 110.2 93 62.4
C04p10840 Brassica napus HOM05D000675 ORTHO05D000395 2.7e-22 109.0 93 62.4
BcaC05g26837 Brassica carinata HOM05D000675 ORTHO05D019849 8.0e-22 107.5 93 60.2
C05p33310 Brassica napus HOM05D000675 ORTHO05D000395 6.7e-21 104.4 93 58.1
BolC4t27258H Brassica oleracea HOM05D000675 ORTHO05D020104 6.7e-21 104.4 93 58.1
C03p35030 Brassica napus HOM05D000675 ORTHO05D000395 2.6e-20 102.4 89 59.6
BraA02t07854Z Brassica rapa HOM05D000675 ORTHO05D003044 5.7e-20 101.3 91 56.0
A02p08880 Brassica napus HOM05D000675 ORTHO05D013243 1.3e-19 100.1 93 57.0
A08p06340 Brassica napus HOM05D000675 ORTHO05D000395 1.3e-19 100.1 93 55.9
BraA02t05957Z Brassica rapa HOM05D000675 ORTHO05D013243 1.3e-19 100.1 93 57.0
C07p04710 Brassica napus HOM05D000675 ORTHO05D000395 1.7e-19 99.8 86 59.3
BolC9t57807H Brassica oleracea HOM05D000675 ORTHO05D013243 1.7e-19 99.8 72 65.3
BraA07t28421Z Brassica rapa HOM05D000675 ORTHO05D000395 2.2e-19 99.4 93 55.9
BcaC07g37751 Brassica carinata HOM05D000675 ORTHO05D000395 3.1e-18 95.5 93 54.8
BolC5t31432H Brassica oleracea HOM05D000675 ORTHO05D019849 4.1e-18 95.1 75 65.3
BraA07t28911Z Brassica rapa HOM05D000675 ORTHO05D000395 2.0e-17 92.8 76 61.8
C06p35350 Brassica napus HOM05D000675 ORTHO05D019849 4.5e-17 91.7 91 54.9
BcaC08g43526 Brassica carinata HOM05D000675 ORTHO05D000395 1.0e-16 90.5 74 59.5
BolC6t35994H Brassica oleracea HOM05D000675 ORTHO05D000395 1.0e-16 90.5 74 59.5
BcaC08g43027 Brassica carinata HOM05D000675 ORTHO05D003044 2.9e-16 89.0 88 54.5
A05p17400 Brassica napus HOM05D000675 ORTHO05D019849 6.5e-16 87.8 75 62.7
A01p22890 Brassica napus HOM05D000675 ORTHO05D013243 8.5e-16 87.4 75 58.7
A07p36210 Brassica napus HOM05D000675 ORTHO05D013243 1.5e-15 86.7 69 59.4
BraA06t25677Z Brassica rapa HOM05D000675 ORTHO05D019849 2.5e-15 85.9 74 62.2
A07p03550 Brassica napus HOM05D000675 ORTHO05D033415 1.2e-14 83.6 60 68.3
BcaC02g10974 Brassica carinata HOM05D000675 ORTHO05D000395 1.0e-13 80.5 93 50.5
C04p22730 Brassica napus HOM05D000675 ORTHO05D000395 1.0e-13 80.5 93 50.5
A08p11640 Brassica napus HOM05D000675 ORTHO05D013243 5.2e-13 78.2 68 55.9
C04p15800 Brassica napus HOM05D000675 ORTHO05D000395 1.2e-12 77.0 88 51.1
BolC4t23150H Brassica oleracea HOM05D000675 ORTHO05D000395 1.5e-12 76.6 88 51.1
BcaB04g17831 Brassica carinata HOM05D000675 ORTHO05D000395 2.0e-12 76.3 65 56.9
BraA05t20960Z Brassica rapa HOM05D000675 ORTHO05D033165 2.0e-12 76.3 50 70.0
BcaC08g44724 Brassica carinata HOM05D000675 ORTHO05D000395 2.6e-12 75.9 88 50.0
BcaC09g49047 Brassica carinata HOM05D000675 ORTHO05D000395 2.6e-12 75.9 88 51.1
C01p43180 Brassica napus HOM05D000675 ORTHO05D013785 2.6e-12 75.9 88 51.1
BcaC06g34976 Brassica carinata HOM05D000675 ORTHO05D000395 3.4e-12 75.5 83 51.8
C05p19710 Brassica napus HOM05D000675 ORTHO05D000395 3.4e-12 75.5 88 50.0
BolC5t30672H Brassica oleracea HOM05D000675 ORTHO05D000395 3.4e-12 75.5 88 50.0
A03p64600 Brassica napus HOM05D000675 ORTHO05D013243 5.7e-12 74.7 46 73.9
A10p17730 Brassica napus HOM05D000675 ORTHO05D033165 5.7e-12 74.7 43 79.1
BolC5t30408H Brassica oleracea HOM05D000675 ORTHO05D000395 5.7e-12 74.7 83 50.6
BraA03t15526Z Brassica rapa HOM05D000675 ORTHO05D013243 5.7e-12 74.7 46 73.9
BcaB03g16231 Brassica carinata HOM05D000675 ORTHO05D000395 7.5e-12 74.3 88 42.0
BcaC02g12835 Brassica carinata HOM05D000675 ORTHO05D000395 7.5e-12 74.3 56 58.9
C04p39370 Brassica napus HOM05D000675 ORTHO05D000395 7.5e-12 74.3 56 58.9
BolC4t25504H Brassica oleracea HOM05D000675 ORTHO05D000395 7.5e-12 74.3 56 58.9
A02p27950 Brassica napus HOM05D000675 ORTHO05D013243 9.8e-12 73.9 65 60.0
BraA02t09361Z Brassica rapa HOM05D000675 ORTHO05D000395 9.8e-12 73.9 85 47.1
C08p18220 Brassica napus HOM05D000675 ORTHO05D033415 1.3e-11 73.6 60 63.3
A06p35690 Brassica napus HOM05D000675 ORTHO05D033165 1.7e-11 73.2 43 76.7
BcaB01g04897 Brassica carinata HOM05D000675 ORTHO05D000395 2.2e-11 72.8 92 47.8
BolC2t09930H Brassica oleracea HOM05D000675 ORTHO05D000395 2.8e-11 72.4 81 49.4
A01p35410 Brassica napus HOM05D000675 ORTHO05D013243 3.7e-11 72.0 65 58.5
A06p28200 Brassica napus HOM05D000675 ORTHO05D013243 3.7e-11 72.0 65 58.5
BcaB06g27042 Brassica carinata HOM05D000675 ORTHO05D000395 4.8e-11 71.6 63 49.2
A05p23490 Brassica napus HOM05D000675 ORTHO05D000395 4.8e-11 71.6 73 53.4
A10p08730 Brassica napus HOM05D000675 ORTHO05D019849 4.8e-11 71.6 82 53.7
BolC7t42635H Brassica oleracea HOM05D000675 ORTHO05D000395 4.8e-11 71.6 83 50.6
BraA05t21216Z Brassica rapa HOM05D000675 ORTHO05D000395 4.8e-11 71.6 73 53.4
BraA09t41505Z Brassica rapa HOM05D018291 ORTHO05D019888 6.3e-11 71.2 70 51.4
BcaC09g50290 Brassica carinata HOM05D000675 ORTHO05D000395 8.3e-11 70.9 88 46.6
C02p39190 Brassica napus HOM05D000675 ORTHO05D000395 8.3e-11 70.9 81 49.4
BcaB04g17681 Brassica carinata HOM05D000675 ORTHO05D000395 1.1e-10 70.5 63 54.0
BraA10t42847Z Brassica rapa HOM05D000675 ORTHO05D013243 1.1e-10 70.5 43 74.4
BcaC01g01855 Brassica carinata HOM05D000675 ORTHO05D000395 1.4e-10 70.1 83 48.2
BolC3t14487H Brassica oleracea HOM05D018291 ORTHO05D019888 1.8e-10 69.7 76 52.6
BolC1t03531H Brassica oleracea HOM05D000675 ORTHO05D000395 3.1e-10 68.9 51 64.7
BcaB01g01752 Brassica carinata HOM05D000675 ORTHO05D003044 5.4e-10 68.2 93 45.2
BcaC02g09163 Brassica carinata HOM05D000675 ORTHO05D000395 5.4e-10 68.2 63 49.2
BcaB01g01443 Brassica carinata HOM05D000675 ORTHO05D000395 7.0e-10 67.8 57 56.1
A08p07920 Brassica napus HOM05D000675 ORTHO05D000395 7.0e-10 67.8 50 66.0
A10p26180 Brassica napus HOM05D000675 ORTHO05D000395 7.0e-10 67.8 51 64.7
BolC8t49457H Brassica oleracea HOM05D000675 ORTHO05D033415 7.0e-10 67.8 53 64.2
CARHR283870 Cardamine hirsuta HOM05D000675 ORTHO05D000395 1.6e-09 66.6 67 49.3
C01p26930 Brassica napus HOM05D000675 ORTHO05D000395 2.7e-09 65.9 88 44.3
BolC1t02639H Brassica oleracea HOM05D000675 ORTHO05D000395 2.7e-09 65.9 88 44.3
CARHR035130 Cardamine hirsuta HOM05D000675 ORTHO05D000395 3.5e-09 65.5 56 57.1
BcaC03g15450 Brassica carinata HOM05D018291 ORTHO05D019888 5.9e-09 64.7 78 47.4
BcaNung00118 Brassica carinata HOM05D000675 ORTHO05D000395 5.9e-09 64.7 55 56.4
A07p13050 Brassica napus HOM05D000675 ORTHO05D021848 7.7e-09 64.3 83 41.0
Thhalv10029439m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 7.7e-09 64.3 65 46.2
BcaB01g02520 Brassica carinata HOM05D000675 ORTHO05D000395 1.0e-08 63.9 56 50.0
BraA08t32511Z Brassica rapa HOM05D000675 ORTHO05D041170 1.0e-08 63.9 69 50.7
BraA06t26493Z Brassica rapa HOM05D000675 ORTHO05D108033 1.3e-08 63.5 36 77.8
AL1G57250 Arabidopsis lyrata HOM05D000675 ORTHO05D000395 1.7e-08 63.2 74 50.0
A08p04840 Brassica napus HOM05D000675 ORTHO05D041170 1.7e-08 63.2 69 49.3
A08p09110 Brassica napus HOM05D000675 ORTHO05D000395 1.7e-08 63.2 69 46.4
BolC8t48427H Brassica oleracea HOM05D000675 ORTHO05D000395 1.7e-08 63.2 69 47.8
BcaB06g27534 Brassica carinata HOM05D000675 ORTHO05D000395 2.9e-08 62.4 63 49.2
Thhalv10015254m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.9e-08 62.4 56 53.6
BcaC02g11419 Brassica carinata HOM05D000675 ORTHO05D013243 3.8e-08 62.0 45 66.7
BcaNung03743 Brassica carinata HOM05D000675 ORTHO05D000395 3.8e-08 62.0 61 47.5
CARHR150440 Cardamine hirsuta HOM05D000675 ORTHO05D000395 3.8e-08 62.0 77 45.5
BcaC02g10278 Brassica carinata HOM05D000675 ORTHO05D000395 5.0e-08 61.6 69 44.9
BcaC09g51286 Brassica carinata HOM05D000675 ORTHO05D000395 5.0e-08 61.6 69 43.5
C01p14780 Brassica napus HOM05D000675 ORTHO05D000395 5.0e-08 61.6 69 43.5
BcaC05g25771 Brassica carinata HOM05D000675 ORTHO05D021848 6.5e-08 61.2 71 49.3
C05p17010 Brassica napus HOM05D000675 ORTHO05D000395 6.5e-08 61.2 71 49.3
Thhalv10024008m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 6.5e-08 61.2 56 50.0
A10p13650 Brassica napus HOM05D000675 ORTHO05D000395 8.5e-08 60.8 56 50.0
BraA07t31229Z Brassica rapa HOM05D000675 ORTHO05D000395 8.5e-08 60.8 56 50.0
BcaB03g15207 Brassica carinata HOM05D000675 ORTHO05D000395 1.1e-07 60.5 67 44.8
BcaB02g11112 Brassica carinata HOM05D000675 ORTHO05D000395 1.5e-07 60.1 55 50.9
BolC4t25530H Brassica oleracea HOM05D000675 ORTHO05D000395 1.5e-07 60.1 67 46.3
BolC4t25936H Brassica oleracea HOM05D000675 ORTHO05D000395 1.5e-07 60.1 56 48.2
BolC7t40834H Brassica oleracea HOM05D000675 ORTHO05D000395 1.5e-07 60.1 56 51.8
A09p30140 Brassica napus HOM05D000675 ORTHO05D000395 1.9e-07 59.7 62 48.4
A09p50420 Brassica napus HOM05D000675 ORTHO05D000395 1.9e-07 59.7 62 48.4
A10p11870 Brassica napus HOM05D018291 ORTHO05D019888 1.9e-07 59.7 50 56.0
Thhalv10002316m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.9e-07 59.7 56 50.0
A05p23390 Brassica napus HOM05D000675 ORTHO05D000395 2.5e-07 59.3 56 48.2
C06p37640 Brassica napus HOM05D000675 ORTHO05D000395 2.5e-07 59.3 56 50.0
BolC2t12302H Brassica oleracea HOM05D000675 ORTHO05D000395 2.5e-07 59.3 56 50.0
BraA05t21202Z Brassica rapa HOM05D000675 ORTHO05D000395 2.5e-07 59.3 56 48.2
BcaB02g11538 Brassica carinata HOM05D000675 ORTHO05D093425 3.2e-07 58.9 40 70.0
BcaB07g32139 Brassica carinata HOM05D000675 ORTHO05D000395 3.2e-07 58.9 53 49.1
Thhalv10002281m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 3.2e-07 58.9 56 50.0
SpUn1900_0010 Schrenkiella parvula HOM05D000675 ORTHO05D000395 3.2e-07 58.9 53 49.1
BcaB05g24010 Brassica carinata HOM05D000675 ORTHO05D000395 4.2e-07 58.5 56 48.2
BcaC03g14557 Brassica carinata HOM05D000675 ORTHO05D000395 4.2e-07 58.5 52 51.9
BcaC03g18179 Brassica carinata HOM05D000675 ORTHO05D000395 4.2e-07 58.5 53 50.9
A04p05490 Brassica napus HOM05D000675 ORTHO05D000395 4.2e-07 58.5 52 51.9
BraA01t02713Z Brassica rapa HOM05D000675 ORTHO05D027218 4.2e-07 58.5 56 48.2
Thhalv10027512m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 4.2e-07 58.5 56 48.2
AL3G21260 Arabidopsis lyrata HOM05D000675 ORTHO05D000395 5.5e-07 58.2 66 50.0
BcaNung03607 Brassica carinata HOM05D000675 ORTHO05D000395 5.5e-07 58.2 54 50.0
BcaB05g24643 Brassica carinata HOM05D000675 ORTHO05D000395 9.4e-07 57.4 56 48.2
BraA08t32642Z Brassica rapa HOM05D000675 ORTHO05D013243 9.4e-07 57.4 50 58.0
Thhalv10012388m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 9.4e-07 57.4 56 48.2
BcaC01g02919 Brassica carinata HOM05D000675 ORTHO05D000395 1.2e-06 57.0 56 46.4
BcaC01g03691 Brassica carinata HOM05D000675 ORTHO05D000395 1.2e-06 57.0 58 50.0
C03p78160 Brassica napus HOM05D000675 ORTHO05D000395 1.6e-06 56.6 56 46.4
C04p36560 Brassica napus HOM05D000675 ORTHO05D000395 1.6e-06 56.6 56 46.4
BolC4t25141H Brassica oleracea HOM05D000675 ORTHO05D000395 1.6e-06 56.6 56 46.4
BcaC04g21582 Brassica carinata HOM05D000675 ORTHO05D000395 2.1e-06 56.2 69 42.0
CARHR286300 Cardamine hirsuta HOM05D000675 ORTHO05D000395 2.1e-06 56.2 83 41.0
Thhalv10029293m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.1e-06 56.2 67 43.3
BcaB04g20306 Brassica carinata HOM05D000675 ORTHO05D000395 2.7e-06 55.8 56 48.2
BolC4t24606H Brassica oleracea HOM05D000675 ORTHO05D000395 2.7e-06 55.8 63 42.9
BcaC01g02628 Brassica carinata HOM05D000675 ORTHO05D000395 3.6e-06 55.5 69 42.0
A06p22650 Brassica napus HOM05D000675 ORTHO05D000395 3.6e-06 55.5 67 40.3
BcaB04g18329 Brassica carinata HOM05D000675 ORTHO05D000395 4.7e-06 55.1 76 38.2
C04p65980 Brassica napus HOM05D000675 ORTHO05D000395 4.7e-06 55.1 67 41.8
Carub.0001s3343 Capsella rubella HOM05D000675 ORTHO05D000395 4.7e-06 55.1 67 46.3
Sp4g08100 Schrenkiella parvula HOM05D024191 ORTHO05D022104 4.7e-06 55.1 48 50.0
C06p32570 Brassica napus HOM05D000675 ORTHO05D000395 6.1e-06 54.7 56 48.2
C07p33000 Brassica napus HOM05D000675 ORTHO05D000395 6.1e-06 54.7 73 41.1
BolC8t46874H Brassica oleracea HOM05D000675 ORTHO05D000395 6.1e-06 54.7 56 46.4
BraA02t08657Z Brassica rapa HOM05D000675 ORTHO05D021814 6.1e-06 54.7 56 48.2
BcaB06g26589 Brassica carinata HOM05D000675 ORTHO05D000395 8.0e-06 54.3 56 46.4
BcaB07g31602 Brassica carinata HOM05D000675 ORTHO05D000395 8.0e-06 54.3 56 46.4
BcaC01g00314 Brassica carinata HOM05D000675 ORTHO05D000395 8.0e-06 54.3 54 46.3
BcaC01g01732 Brassica carinata HOM05D000675 ORTHO05D000395 8.0e-06 54.3 69 39.1
BcaC02g09792 Brassica carinata HOM05D000675 ORTHO05D000395 8.0e-06 54.3 56 44.6
C07p27890 Brassica napus HOM05D000675 ORTHO05D000395 8.0e-06 54.3 69 42.0
Carub.0002s1170 Capsella rubella HOM05D000675 ORTHO05D000395 8.0e-06 54.3 54 48.1


User provided reference genes

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