Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g21488 Brassica carinata HOM05D006961 ORTHO05D008809 2.8e-91 338.6 170 100.0
C09p31220 Brassica napus HOM05D006961 ORTHO05D008809 2.8e-91 338.6 170 100.0
BolC9t55978H Brassica oleracea HOM05D006961 ORTHO05D008809 2.8e-91 338.6 170 100.0
BraA09t38036Z Brassica rapa HOM05D006961 ORTHO05D008809 2.4e-90 335.5 170 98.8
A09p24430 Brassica napus HOM05D006961 ORTHO05D008809 8.5e-88 327.0 170 97.6
BcaB07g30670 Brassica carinata HOM05D006961 ORTHO05D008809 6.3e-83 310.8 171 93.6
AT2G03420 Arabidopsis thaliana HOM05D006961 ORTHO05D008809 1.3e-80 303.1 171 88.3
A02p33440 Brassica napus HOM05D006961 ORTHO05D008809 1.1e-79 300.1 176 86.9
Sp2g14330 Schrenkiella parvula HOM05D006961 ORTHO05D008809 1.6e-78 296.2 175 86.3
Thhalv10005024m.g Eutrema salsugineum HOM05D006961 ORTHO05D008809 8.0e-78 293.9 171 86.5
Carub.0005s0238 Capsella rubella HOM05D006961 ORTHO05D008809 4.0e-77 291.6 173 85.5
CARHR145760 Cardamine hirsuta HOM05D006961 ORTHO05D008809 3.5e-73 278.5 175 82.9
AL5G13170 Arabidopsis lyrata HOM05D006961 ORTHO05D008809 4.4e-68 261.5 138 92.0
BcaC03g17213 Brassica carinata HOM05D006961 ORTHO05D008809 2.1e-62 242.7 144 86.1
C02p51430 Brassica napus HOM05D006961 ORTHO05D008809 2.1e-62 242.7 144 86.1
BolC2t11231H Brassica oleracea HOM05D006961 ORTHO05D008809 2.1e-62 242.7 144 86.1
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 2.7e-62 242.3 155 76.8
THA.LOC104824066 Tarenaya hassleriana HOM05D006961 ORTHO05D008809 8.6e-56 220.7 174 65.5
COL.COLO4_27931 Corchorus olitorius HOM05D006961 ORTHO05D008809 2.5e-47 192.6 138 70.3
ECA234G0986 Erigeron canadensis HOM05D006961 ORTHO05D008809 5.6e-47 191.4 156 61.5
HanXRQChr12g0379241 Helianthus annuus HOM05D006961 ORTHO05D008809 2.8e-46 189.1 127 73.2
MSTRG.7764 Avicennia marina HOM05D006961 ORTHO05D008809 1.0e-45 187.2 138 65.2
CANSAT64G0471 Cannabis sativa HOM05D006961 ORTHO05D008809 1.2e-44 183.7 162 61.7
Lsat_1_v5_gn_4_10260 Lactuca sativa HOM05D006961 ORTHO05D008809 2.0e-44 183.0 127 68.5
DCAR_027451 Daucus carota HOM05D006961 ORTHO05D008809 2.6e-44 182.6 173 60.1
Eucgr.G02462 Eucalyptus grandis HOM05D006961 ORTHO05D008809 3.4e-44 182.2 125 72.0
Gohir.D05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 5.8e-44 181.4 130 68.5
Sopen05g007430 Solanum pennellii HOM05D006961 ORTHO05D008809 9.8e-44 180.6 139 66.2
Gohir.A05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 1.7e-43 179.9 130 67.7
Atru.chr11.1688 Acer truncatum HOM05D006961 ORTHO05D008809 2.2e-43 179.5 133 66.9
Prupe.1G282200 Prunus persica HOM05D006961 ORTHO05D008809 2.9e-43 179.1 167 53.9
Solyc05g012600.3 Solanum lycopersicum HOM05D006961 ORTHO05D008809 3.7e-43 178.7 172 56.4
Hma1.2p1_0357F.1_g134450 Hydrangea macrophylla HOM05D006961 ORTHO05D008809 4.9e-43 178.3 131 67.2
Ciclev10032810m.g Citrus clementina HOM05D006961 ORTHO05D008809 6.4e-43 177.9 135 65.9
PGSC0003DMG400028327 Solanum tuberosum HOM05D006961 ORTHO05D008809 6.4e-43 177.9 139 64.7
vmacro01328 Vaccinium macrocarpon HOM05D006961 ORTHO05D008809 8.3e-43 177.6 159 58.5
Actinidia19920 Actinidia chinensis HOM05D006961 ORTHO05D008809 1.1e-42 177.2 129 67.4
Lalb_Chr17g0341001 Lupinus albus HOM05D006961 ORTHO05D008809 1.1e-42 177.2 149 60.4
Peaxi162Scf00314g00025 Petunia axillaris HOM05D006961 ORTHO05D008809 1.4e-42 176.8 161 59.0
PGR119G1669 Punica granatum HOM05D006961 ORTHO05D008809 1.4e-42 176.8 148 62.2
SalBow2G3426 Salvia bowleyana HOM05D006961 ORTHO05D008809 2.4e-42 176.0 130 66.9
CAN.G1340.11 Capsicum annuum HOM05D006961 ORTHO05D008809 7.0e-42 174.5 139 63.3
Psat2g128160 Pisum sativum HOM05D006961 ORTHO05D008809 9.2e-42 174.1 165 55.8
TWI75G1056 Tripterygium wilfordii HOM05D006961 ORTHO05D008809 9.2e-42 174.1 140 62.1
PSO478G0730 Papaver somniferum HOM05D006961 ORTHO05D008809 1.2e-41 173.7 136 64.0
TAR622G0866 Trochodendron aralioides HOM05D006961 ORTHO05D008809 1.2e-41 173.7 141 61.7
Duzib268G0330 Durio zibethinus HOM05D006961 ORTHO05D008809 1.6e-41 173.3 130 64.6
unitig_22.g6499 Utricularia gibba HOM05D006961 ORTHO05D008809 1.6e-41 173.3 139 62.6
Ca_04910_v3 Cicer arietinum L. HOM05D006961 ORTHO05D008809 2.0e-41 172.9 135 63.0
Nitab4.5_0000334g0230 Nicotiana tabacum HOM05D006961 ORTHO05D008809 2.0e-41 172.9 151 59.6
CsaV3_5G025620 Cucumis sativus L. HOM05D006961 ORTHO05D008809 3.5e-41 172.2 152 56.6
Dinv34116 Davidia involucrata HOM05D006961 ORTHO05D008809 4.6e-41 171.8 168 56.5
Sed0005182 Sechium edule HOM05D006961 ORTHO05D008809 4.6e-41 171.8 138 61.6
TPR.G24476 Trifolium pratense HOM05D006961 ORTHO05D008809 4.6e-41 171.8 140 60.0
FvH4_4g30480 Fragaria vesca HOM05D006961 ORTHO05D008809 6.0e-41 171.4 125 66.4
PSO017G3353 Papaver somniferum HOM05D006961 ORTHO05D008809 6.0e-41 171.4 136 63.2
Thecc.02G336300 Theobroma cacao HOM05D006961 ORTHO05D008809 6.0e-41 171.4 138 62.3
ClCG09G020750 Citrullus lanatus HOM05D006961 ORTHO05D008809 7.8e-41 171.0 140 61.4
FAN07G0372 Fragaria x ananassa HOM05D006961 ORTHO05D008809 7.8e-41 171.0 125 65.6
FAN17G2308 Fragaria x ananassa HOM05D006961 ORTHO05D008809 7.8e-41 171.0 125 65.6
Medtr5g043580 Medicago truncatula HOM05D006961 ORTHO05D008809 1.0e-40 170.6 135 61.5
SGA_v2.0_scaffold16G07754 Striga asiatica HOM05D006961 ORTHO05D008809 1.0e-40 170.6 126 65.9
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 1.3e-40 170.2 133 63.9
VMungo1215G1627 Vigna mungo HOM05D006961 ORTHO05D008809 2.3e-40 169.5 151 57.6
Ah.03g139190 Amaranthus hybridus HOM05D006961 ORTHO05D008809 3.0e-40 169.1 145 63.4
MELO3C002920.2 Cucumis melo HOM05D006961 ORTHO05D008809 3.0e-40 169.1 138 61.6
FAN22G0366 Fragaria x ananassa HOM05D006961 ORTHO05D008809 3.9e-40 168.7 125 64.8
Glyma.01G055400 Glycine max HOM05D006961 ORTHO05D008809 3.9e-40 168.7 176 52.8
Potri.010G161400 Populus trichocarpa HOM05D006961 ORTHO05D008809 3.9e-40 168.7 125 64.0
MD13G1065900 Malus domestica HOM05D006961 ORTHO05D008809 8.6e-40 167.5 164 54.3
MD16G1064700 Malus domestica HOM05D006961 ORTHO05D008809 1.1e-39 167.2 126 65.9
Cfa008905 Carpinus fangiana HOM05D006961 ORTHO05D008809 1.5e-39 166.8 133 62.4
arahy.Tifrunner.gnm1.ann1.T2VQ83 Arachis hypogaea HOM05D006961 ORTHO05D008809 1.9e-39 166.4 119 68.1
arahy.Tifrunner.gnm1.ann1.TP0XC6 Arachis hypogaea HOM05D006961 ORTHO05D008809 1.9e-39 166.4 119 68.1
QL03p070935 Quercus lobata HOM05D006961 ORTHO05D008809 1.9e-39 166.4 137 62.0
Lj2g0005939 Lotus japonicus HOM05D006961 ORTHO05D008809 2.5e-39 166.0 173 50.3
Nn3g17372 Nelumbo nucifera HOM05D006961 ORTHO05D008809 2.5e-39 166.0 126 68.3
RcHm_v2.0_Chr4g0438851 Rosa chinensis HOM05D006961 ORTHO05D008809 2.5e-39 166.0 125 64.8
CiPaw.06G090400 Carya illinoinensis HOM05D006961 ORTHO05D008809 3.3e-39 165.6 150 60.0
GSVIVG01012179001 Vitis vinifera HOM05D006961 ORTHO05D008809 3.3e-39 165.6 158 55.7
AUR62003136 Chenopodium quinoa HOM05D006961 ORTHO05D008809 4.3e-39 165.2 127 67.7
CSS0004568 Camellia sinensis var. sinensis HOM05D006961 ORTHO05D008809 5.6e-39 164.9 136 61.8
Cpa.g.sc1.93 Carica papaya HOM05D006961 ORTHO05D008809 7.3e-39 164.5 143 60.1
CDE07G0364 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 7.3e-39 164.5 117 66.7
Glyma.02G113800 Glycine max HOM05D006961 ORTHO05D008809 7.3e-39 164.5 131 61.1
Rhsim12G0076500 Rhododendron simsii HOM05D006961 ORTHO05D008809 7.3e-39 164.5 141 60.3
Hund05862 Selenicereus undatus HOM05D006961 ORTHO05D008809 7.3e-39 164.5 158 57.0
AUR62007955 Chenopodium quinoa HOM05D006961 ORTHO05D008809 9.5e-39 164.1 145 62.8
Oeu015341.2 Olea europaea HOM05D006961 ORTHO05D008809 9.5e-39 164.1 109 70.6
Manes.05G107700 Manihot esculenta HOM05D006961 ORTHO05D008809 1.6e-38 163.3 137 60.6
Migut.L01221 Erythranthe guttata HOM05D006961 ORTHO05D008809 2.1e-38 162.9 121 66.1
Cc11_g12360 Coffea canephora HOM05D006961 ORTHO05D008809 3.6e-38 162.2 120 65.0
Zm00001eb400470 Zea mays HOM05D006961 ORTHO05D008809 1.1e-37 160.6 121 64.5
Aqoxy3G00448 Aquilegia oxysepala HOM05D006961 ORTHO05D008809 1.8e-37 159.8 122 62.3
Lj3A1032T68 Lonicera japonica HOM05D006961 ORTHO05D008809 1.8e-37 159.8 121 63.6
MBI16_g15564_MAGBIO Magnolia biondii HOM05D006961 ORTHO05D008809 3.1e-37 159.1 135 62.2
EL10Ac6g14957 Beta vulgaris HOM05D006961 ORTHO05D008809 6.8e-37 157.9 122 65.6
HPP92_023640 Vanilla planifolia HOM05D006961 ORTHO05D008809 2.6e-36 156.0 117 63.2
CDE04G0363 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 9.8e-36 154.1 116 64.7
ATR0111G017 Amborella trichopoda HOM05D006961 ORTHO05D008809 2.2e-35 152.9 128 55.5
Sc04g0007750 Simmondsia chinensis HOM05D006961 ORTHO05D008809 9.2e-34 147.5 99 68.7
SEGI_13566 Sequoiadendron giganteum HOM05D006961 ORTHO05D008809 6.6e-32 141.4 117 57.3
HPP92_023624 Vanilla planifolia HOM05D006961 ORTHO05D008809 1.4e-26 123.6 95 62.1
Zm00001eb176890 Zea mays HOM05D006961 ORTHO05D008809 2.7e-25 119.4 84 65.5
Gorai.009G326100 Gossypium raimondii HOM05D006961 ORTHO05D008809 1.1e-23 114.0 120 55.0
Mapoly0047s0086 Marchantia polymorpha HOM05D006961 ORTHO05D008809 1.9e-23 113.2 166 40.4
Actinidia31945 Actinidia chinensis HOM05D006961 ORTHO05D008809 6.2e-22 108.2 83 68.7
Pp3c5_22460 Physcomitrium patens HOM05D006961 ORTHO05D008809 2.4e-21 106.3 118 47.5
AagrBONN_evm.TU.Sc2ySwM_228.3757 Anthoceros agrestis HOM05D006961 ORTHO05D008809 4.4e-20 102.1 119 45.4
SalBow2G3119 Salvia bowleyana HOM05D006961 ORTHO05D008809 1.2e-17 94.0 70 67.1
SMO356G0726 Selaginella moellendorffii HOM05D006961 ORTHO05D008809 2.3e-16 89.7 118 42.4
CBR_g50745 Chara braunii HOM05D006961 ORTHO05D008809 5.6e-15 85.1 115 38.3
FAN12G0580 Fragaria x ananassa HOM05D006961 ORTHO05D008809 3.4e-12 75.9 50 64.0
Cre02.g114450 Chlamydomonas reinhardtii HOM05D006961 ORTHO05D008809 6.7e-08 61.6 134 38.1


User provided reference genes

Program Settings