Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 6.3e-202 707.2 356 100.0
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 1.4e-201 706.1 356 99.7
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 1.2e-197 693.0 356 97.8
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 2.6e-195 685.3 356 96.1
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 1.1e-185 653.3 356 91.9
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 4.3e-182 641.3 356 90.2
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 7.3e-182 640.6 356 87.4
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 6.8e-180 634.0 356 87.9
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 1.2e-179 633.3 356 87.6
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 1.5e-179 632.9 357 89.1
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 7.5e-179 630.6 317 99.7
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 1.7e-178 629.4 356 87.6
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 4.9e-162 574.7 367 78.7
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 3.4e-147 525.4 358 72.3
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 2.9e-146 522.3 358 71.2
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 4.9e-146 521.5 356 73.3
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 1.9e-145 519.6 358 71.8
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 1.3e-143 513.5 358 71.5
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 1.7e-143 513.1 356 70.5
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 1.9e-142 509.6 351 72.1
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 2.5e-142 509.2 351 70.9
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 5.6e-142 508.1 356 69.9
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 9.6e-142 507.3 356 70.2
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 1.6e-141 506.5 357 69.2
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 1.6e-141 506.5 358 69.6
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 3.6e-141 505.4 356 69.1
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 4.8e-141 505.0 360 68.9
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 4.8e-141 505.0 350 70.9
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 2.4e-140 502.7 354 70.3
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 2.4e-140 502.7 350 70.6
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 3.1e-140 502.3 355 69.9
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 4.0e-140 501.9 351 69.8
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 4.0e-140 501.9 359 70.8
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 6.9e-140 501.1 351 69.8
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 6.9e-140 501.1 356 68.3
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 2.6e-139 499.2 336 72.9
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 2.9e-138 495.7 360 66.9
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 6.4e-138 494.6 360 67.8
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 8.4e-138 494.2 358 67.9
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 2.4e-137 492.7 357 67.2
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 9.3e-137 490.7 360 66.9
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 1.2e-136 490.3 328 72.9
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 1.2e-136 490.3 356 66.9
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 2.7e-136 489.2 358 67.0
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 3.5e-136 488.8 357 67.2
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 6.0e-136 488.0 360 66.1
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 1.0e-135 487.3 361 65.7
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 1.8e-135 486.5 359 68.2
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 1.8e-135 486.5 360 66.4
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 2.3e-135 486.1 353 67.1
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 3.9e-135 485.3 358 65.4
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 5.1e-135 485.0 358 66.2
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 6.7e-135 484.6 353 65.7
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 6.7e-135 484.6 352 68.5
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 8.7e-135 484.2 362 65.2
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 8.7e-135 484.2 362 65.2
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 1.1e-134 483.8 360 65.6
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 1.1e-134 483.8 357 68.1
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 1.5e-134 483.4 354 68.4
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 1.9e-134 483.0 353 67.1
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 4.3e-134 481.9 335 69.9
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 5.6e-134 481.5 355 65.9
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 5.6e-134 481.5 360 65.0
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 7.4e-134 481.1 355 65.4
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 7.4e-134 481.1 334 72.2
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 7.4e-134 481.1 361 65.1
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 1.6e-133 479.9 360 66.4
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 4.8e-133 478.4 361 65.1
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 1.1e-132 477.2 353 66.3
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 1.1e-132 477.2 349 64.8
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 1.4e-132 476.9 356 66.3
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 1.8e-132 476.5 357 65.3
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 3.1e-132 475.7 362 64.9
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 1.2e-131 473.8 374 65.2
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 1.5e-131 473.4 363 64.5
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 4.5e-131 471.9 374 65.0
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 2.9e-130 469.2 352 66.2
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 6.5e-130 468.0 348 66.1
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 1.4e-129 466.8 352 66.2
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 1.4e-129 466.8 368 66.3
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 2.5e-129 466.1 361 64.5
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 1.6e-128 463.4 328 70.4
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 3.3e-126 455.7 354 64.7
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 5.7e-126 454.9 354 63.0
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.3e-125 453.8 356 64.3
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 1.6e-125 453.4 353 63.5
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 3.1e-124 449.1 360 62.5
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 1.5e-123 446.8 360 64.2
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 2.9e-122 442.6 435 54.3
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 2.9e-122 442.6 353 61.8
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 5.0e-122 441.8 314 69.1
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 7.2e-121 438.0 354 61.3
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 7.9e-120 434.5 355 61.4
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 1.8e-119 433.3 355 59.2
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 1.3e-117 427.2 336 62.5
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 6.3e-117 424.9 401 55.9
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 6.3e-117 424.9 361 58.2
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 5.0e-114 415.2 287 71.4
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 2.5e-113 412.9 417 52.8
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 1.2e-112 410.6 289 68.9
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 3.6e-112 409.1 313 64.5
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 6.9e-108 394.8 274 72.3
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 3.4e-107 392.5 287 68.6
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 2.2e-106 389.8 315 61.6
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 3.2e-105 386.0 275 69.5
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 8.8e-103 377.9 351 55.6
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 9.7e-102 374.4 305 64.6
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 1.7e-98 363.6 354 54.2
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 1.1e-97 360.9 350 53.4
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 1.8e-92 343.6 261 66.7
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 3.5e-91 339.3 329 57.4
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 1.5e-86 323.9 255 62.0
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 1.7e-85 320.5 262 60.7
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 1.7e-82 310.5 349 47.6
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 5.2e-79 298.9 300 50.7
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 1.4e-68 264.2 440 37.0
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 1.3e-66 257.7 353 45.6
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 6.6e-58 228.8 352 40.6
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 3.1e-55 219.9 175 65.7
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 3.1e-55 219.9 271 49.1
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 2.1e-51 207.2 351 37.3
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 4.6e-51 206.1 240 51.2
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 1.1e-47 194.9 210 54.3
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 6.8e-47 192.2 180 60.0
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 2.0e-46 190.7 180 59.4
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 5.1e-42 176.0 244 46.3
CANSAT64G1767 Cannabis sativa HOM05D005739 ORTHO05D033954 2.0e-30 137.5 108 58.3
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 4.2e-20 103.2 197 38.1
CANSAT56G0563 Cannabis sativa HOM05D005739 ORTHO05D113818 3.5e-19 100.1 102 51.0
SEGI_28449 Sequoiadendron giganteum HOM05D005739 ORTHO05D033954 1.5e-14 84.7 75 53.3
arahy.Tifrunner.gnm1.ann1.3ZZ8UM Arachis hypogaea HOM05D000187 ORTHO05D000230 6.5e-13 79.3 170 36.5
RcHm_v2.0_Chr5g0051251 Rosa chinensis HOM05D005739 ORTHO05D033954 1.4e-12 78.2 62 58.1
arahy.Tifrunner.gnm1.ann1.ZUJ3H1 Arachis hypogaea HOM05D005739 ORTHO05D083715 5.7e-09 66.2 64 59.4
Nn1g07096 Nelumbo nucifera HOM05D005739 ORTHO05D007740 1.0e-05 55.5 83 38.6


User provided reference genes

Program Settings