Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g21312 Brassica carinata HOM05D007386 ORTHO05D009210 1.5e-76 289.7 168 100.0
C09p33290 Brassica napus HOM05D007386 ORTHO05D009210 1.5e-76 289.7 168 100.0
BolC9t56165H Brassica oleracea HOM05D007386 ORTHO05D009210 1.5e-76 289.7 168 100.0
Sp6g04310 Schrenkiella parvula HOM05D007386 ORTHO05D009210 1.2e-65 253.4 168 90.5
A09p26200 Brassica napus HOM05D007386 ORTHO05D009210 1.7e-64 249.6 170 90.0
BraA09t38188Z Brassica rapa HOM05D007386 ORTHO05D009210 2.2e-64 249.2 171 89.5
BcaB01g01820 Brassica carinata HOM05D007386 ORTHO05D009210 2.5e-63 245.7 171 87.7
Thhalv10029017m.g Eutrema salsugineum HOM05D007386 ORTHO05D009210 3.5e-62 241.9 172 87.2
AT4G04614 Arabidopsis thaliana HOM05D007386 ORTHO05D009210 4.3e-60 235.0 177 83.6
CARHR252930 Cardamine hirsuta HOM05D007386 ORTHO05D009210 6.3e-59 231.1 172 83.7
Carub.0006s3245 Capsella rubella HOM05D007386 ORTHO05D009210 3.8e-56 221.9 130 90.0
AL6G48080 Arabidopsis lyrata HOM05D007386 ORTHO05D009210 1.1e-55 220.3 130 88.5
Aa31LG9G9760 Aethionema arabicum HOM05D000698 ORTHO05D009210 2.5e-52 209.1 131 82.4
THA.LOC104813154 Tarenaya hassleriana HOM05D007386 ORTHO05D009210 8.8e-45 184.1 125 73.6
Duzib168G0678 Durio zibethinus HOM05D007386 ORTHO05D009210 5.7e-36 154.8 168 50.6
Cpa.g.sc95.34 Carica papaya HOM05D007386 ORTHO05D009210 5.3e-34 148.3 169 48.5
Gohir.A08G081100 Gossypium hirsutum HOM05D007386 ORTHO05D009210 5.9e-33 144.8 122 58.2
MSTRG.21545 Avicennia marina HOM05D007386 ORTHO05D009210 2.2e-32 142.9 126 60.3
SalBow4G1029 Salvia bowleyana HOM05D007386 ORTHO05D009210 2.2e-32 142.9 172 47.7
GSVIVG01001191001 Vitis vinifera HOM05D007386 ORTHO05D009210 2.2e-32 142.9 124 60.5
COL.COLO4_25451 Corchorus olitorius HOM05D007386 ORTHO05D009210 3.8e-32 142.1 135 54.1
Gohir.D08G093000 Gossypium hirsutum HOM05D007386 ORTHO05D009210 5.0e-32 141.7 126 55.6
Gorai.004G098600 Gossypium raimondii HOM05D007386 ORTHO05D009210 5.0e-32 141.7 126 55.6
TAR636G2514 Trochodendron aralioides HOM05D007386 ORTHO05D009210 8.5e-32 141.0 141 52.5
arahy.Tifrunner.gnm1.ann1.ZF8TUR Arachis hypogaea HOM05D007386 ORTHO05D009210 1.1e-31 140.6 133 56.4
Sc05g0001200 Simmondsia chinensis HOM05D007386 ORTHO05D009210 1.5e-31 140.2 151 53.0
Eucgr.K03341 Eucalyptus grandis HOM05D007386 ORTHO05D009210 1.9e-31 139.8 146 52.1
Thecc.09G179900 Theobroma cacao HOM05D007386 ORTHO05D009210 1.9e-31 139.8 134 53.7
arahy.Tifrunner.gnm1.ann1.JNW8E7 Arachis hypogaea HOM05D007386 ORTHO05D009210 3.2e-31 139.0 133 54.9
PGR044G1958 Punica granatum HOM05D007386 ORTHO05D009210 1.2e-30 137.1 138 55.8
Manes.05G078600 Manihot esculenta HOM05D007386 ORTHO05D009210 2.7e-30 136.0 144 52.1
Lalb_Chr06g0162851 Lupinus albus HOM05D007386 ORTHO05D009210 4.7e-30 135.2 140 52.9
Nn6g34127 Nelumbo nucifera HOM05D007386 ORTHO05D009210 6.1e-30 134.8 159 49.7
Medtr1g071630 Medicago truncatula HOM05D007386 ORTHO05D009210 8.0e-30 134.4 170 51.2
Oeu059791.1 Olea europaea HOM05D007386 ORTHO05D009210 8.0e-30 134.4 145 54.5
TWI18G1441 Tripterygium wilfordii HOM05D007386 ORTHO05D009210 8.0e-30 134.4 145 55.2
ECA247G1531 Erigeron canadensis HOM05D007386 ORTHO05D009210 2.3e-29 132.9 179 49.7
HanXRQChr10g0282251 Helianthus annuus HOM05D007386 ORTHO05D009210 3.0e-29 132.5 151 53.0
AUR62030273 Chenopodium quinoa HOM05D007386 ORTHO05D009210 6.8e-29 131.3 139 52.5
MBI11_g22999_MAGBIO Magnolia biondii HOM05D007386 ORTHO05D009210 6.8e-29 131.3 133 54.9
AUR62018389 Chenopodium quinoa HOM05D000027 ORTHO05D000066 8.8e-29 131.0 139 52.5
CSS0002766 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 1.2e-28 130.6 144 49.3
Cfa006177 Carpinus fangiana HOM05D007386 ORTHO05D009210 1.2e-28 130.6 146 50.7
vmacro02599 Vaccinium macrocarpon HOM05D007386 ORTHO05D009210 1.5e-28 130.2 138 52.2
Ca_09739_v3 Cicer arietinum L. HOM05D007386 ORTHO05D009210 2.6e-28 129.4 129 54.3
Potri.005G213000 Populus trichocarpa HOM05D007386 ORTHO05D009210 2.6e-28 129.4 138 51.4
Glyma.02G145500 Glycine max HOM05D007386 ORTHO05D009210 3.4e-28 129.0 148 51.4
Psat6g059880 Pisum sativum HOM05D007386 ORTHO05D009210 3.4e-28 129.0 118 57.6
Rhsim13G0027600 Rhododendron simsii HOM05D007386 ORTHO05D009210 3.4e-28 129.0 135 51.9
Haze_04670 Corylus avellana HOM05D007386 ORTHO05D009210 4.4e-28 128.6 146 52.1
TPR.G25681 Trifolium pratense HOM05D007386 ORTHO05D009210 4.4e-28 128.6 132 52.3
Ah.04g150680 Amaranthus hybridus HOM05D007386 ORTHO05D009210 5.7e-28 128.3 133 54.1
CiPaw.07G088700 Carya illinoinensis HOM05D007386 ORTHO05D009210 5.7e-28 128.3 119 57.1
QL12p020752 Quercus lobata HOM05D007386 ORTHO05D009210 5.7e-28 128.3 136 52.2
VMungo0720G1463 Vigna mungo HOM05D007386 ORTHO05D009210 7.5e-28 127.9 140 50.7
EL10Ac3g07280 Beta vulgaris HOM05D007386 ORTHO05D009210 9.8e-28 127.5 137 51.8
Phvul.007G173800 Phaseolus vulgaris HOM05D007386 ORTHO05D009210 1.3e-27 127.1 126 53.2
Actinidia00789 Actinidia chinensis HOM05D007386 ORTHO05D009210 1.7e-27 126.7 136 50.7
Prupe.8G236700 Prunus persica HOM05D007386 ORTHO05D009210 1.7e-27 126.7 151 50.3
CSS0036584 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 2.8e-27 125.9 133 50.4
Sabra05G0162700 Salix brachista HOM05D007386 ORTHO05D009210 8.3e-27 124.4 137 51.1
CDE06G2441 Ceratophyllum demersum HOM05D007386 ORTHO05D009210 2.4e-26 122.9 136 52.2
Cc01_g19160 Coffea canephora HOM05D007386 ORTHO05D009210 2.4e-26 122.9 128 56.2
Glyma.10G028600 Glycine max HOM05D007386 ORTHO05D009210 3.1e-26 122.5 137 51.8
HPP92_020354 Vanilla planifolia HOM05D007386 ORTHO05D009210 5.4e-26 121.7 139 54.7
ATR0665G488 Amborella trichopoda HOM05D007386 ORTHO05D009210 1.3e-24 117.1 120 57.5
DCAR_018437 Daucus carota HOM05D007386 ORTHO05D009210 1.3e-24 117.1 146 49.3
CANSAT78G1636 Cannabis sativa HOM05D007386 ORTHO05D009210 6.5e-24 114.8 156 44.9
Dinv34778 Davidia involucrata HOM05D002659 ORTHO05D002940 8.0e-22 107.8 109 54.1
Lsat_1_v5_gn_9_6101 Lactuca sativa HOM05D007386 ORTHO05D009210 8.0e-22 107.8 136 44.9
Hund09518 Selenicereus undatus HOM05D007386 ORTHO05D009210 1.0e-21 107.5 134 47.0
ClCG09G007290 Citrullus lanatus HOM05D007386 ORTHO05D009210 8.8e-21 104.4 141 46.1
Aqoxy5G00426 Aquilegia oxysepala HOM05D007386 ORTHO05D009210 1.2e-20 104.0 132 47.7
Migut.D00331 Erythranthe guttata HOM05D007386 ORTHO05D009210 4.4e-20 102.1 122 50.0
MELO3C015793.2 Cucumis melo HOM05D007386 ORTHO05D009210 5.7e-20 101.7 149 43.6
SGA_v2.0_scaffold1G00514 Striga asiatica HOM05D007386 ORTHO05D009210 1.7e-19 100.1 133 50.4
MD03G1260500 Malus domestica HOM05D007386 ORTHO05D009210 1.8e-18 96.7 157 40.8
unitig_0.g1138 Utricularia gibba HOM05D007386 ORTHO05D009210 2.4e-18 96.3 123 48.8
Ciclev10022575m.g Citrus clementina HOM05D007386 ORTHO05D009210 9.2e-18 94.4 142 43.0
Lj5g0008996 Lotus japonicus HOM05D007386 ORTHO05D009210 1.6e-17 93.6 142 46.5
Nitab4.5_0000252g0090 Nicotiana tabacum HOM05D007386 ORTHO05D009210 1.6e-17 93.6 137 43.1
CsaV3_7G027780 Cucumis sativus L. HOM05D007386 ORTHO05D009210 2.9e-16 89.4 153 39.2
FAN15G1284 Fragaria x ananassa HOM05D007386 ORTHO05D009210 2.9e-16 89.4 130 45.4
SMO351G0424 Selaginella moellendorffii HOM05D007386 ORTHO05D009210 2.9e-16 89.4 125 44.8
MD11G1280800 Malus domestica HOM05D007386 ORTHO05D009210 1.9e-15 86.7 144 38.9
Nitab4.5_0009452g0010 Nicotiana tabacum HOM05D007386 ORTHO05D009210 2.5e-15 86.3 128 42.2
Peaxi162Scf00230g01010 Petunia axillaris HOM05D007386 ORTHO05D009210 9.5e-15 84.3 144 41.0
Pp3c25_4880 Physcomitrium patens HOM05D007386 ORTHO05D009210 1.6e-14 83.6 141 41.1
Sed0008482 Sechium edule HOM05D007386 ORTHO05D009210 1.6e-14 83.6 138 38.4
SGA_v2.0_scaffold244G44361 Striga asiatica HOM05D007386 ORTHO05D009210 3.0e-13 79.3 74 63.5
PSO832G2845 Papaver somniferum HOM05D007386 ORTHO05D009210 8.9e-13 77.8 141 41.8
PSO210G0643 Papaver somniferum HOM05D007386 ORTHO05D009210 1.5e-12 77.0 145 41.4
Atru.chr5.1489 Acer truncatum HOM05D007386 ORTHO05D009210 4.4e-12 75.5 140 37.9
FAN24G1308 Fragaria x ananassa HOM05D007386 ORTHO05D009210 1.7e-11 73.6 131 40.5
FvH4_2g23140 Fragaria vesca HOM05D007386 ORTHO05D009210 4.9e-11 72.0 135 39.3
FAN20G3170 Fragaria x ananassa HOM05D007386 ORTHO05D009210 2.7e-09 66.2 132 37.9
RcHm_v2.0_Chr6g0290391 Rosa chinensis HOM05D007386 ORTHO05D009210 1.6e-06 57.0 156 33.3
FAN27G1502 Fragaria x ananassa HOM05D007386 ORTHO05D009210 8.0e-06 54.7 121 37.2


User provided reference genes

Program Settings