Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g21305 Brassica carinata HOM05D000003 ORTHO05D001498 5.7e-56 220.7 113 100.0
BcaC09g50917 Brassica carinata HOM05D000003 ORTHO05D001498 8.8e-33 143.7 108 68.5
BraA03t14295Z Brassica rapa HOM05D000003 ORTHO05D001498 3.7e-31 138.3 108 69.4
BcaC03g14322 Brassica carinata HOM05D000003 ORTHO05D001498 8.3e-31 137.1 108 66.7
BcaB07g32454 Brassica carinata HOM05D000003 ORTHO05D001498 3.0e-25 118.6 101 62.4
BolC1t04389H Brassica oleracea HOM05D000003 ORTHO05D001498 3.0e-25 118.6 108 60.2
BraA10t43514Z Brassica rapa HOM05D000003 ORTHO05D001498 3.0e-25 118.6 109 59.6
BraA01t00843Z Brassica rapa HOM05D000003 ORTHO05D001498 2.6e-24 115.5 104 59.6
BcaB05g22683 Brassica carinata HOM05D000003 ORTHO05D001498 1.7e-23 112.8 104 60.6
BcaC01g02365 Brassica carinata HOM05D000003 ORTHO05D001498 3.7e-23 111.7 104 56.7
BcaC01g03350 Brassica carinata HOM05D000003 ORTHO05D001498 3.2e-22 108.6 104 55.8
BcaB07g32761 Brassica carinata HOM05D000003 ORTHO05D001498 1.6e-21 106.3 98 55.1
BolC2t10141H Brassica oleracea HOM05D000003 ORTHO05D001498 1.0e-20 103.6 106 58.5
BolC5t31802H Brassica oleracea HOM05D000003 ORTHO05D001498 1.3e-20 103.2 100 53.0
C05p30710 Brassica napus HOM05D000003 ORTHO05D001498 2.5e-19 99.0 100 51.0
BcaC03g16311 Brassica carinata HOM05D000003 ORTHO05D001498 5.6e-19 97.8 92 59.8
BcaC04g21023 Brassica carinata HOM05D000003 ORTHO05D001498 7.3e-19 97.4 105 46.7
A05p25020 Brassica napus HOM05D000003 ORTHO05D001498 2.1e-18 95.9 99 49.5
BcaNung02475 Brassica carinata HOM05D000003 ORTHO05D001498 2.8e-18 95.5 85 62.4
C04p27500 Brassica napus HOM05D000003 ORTHO05D001498 3.6e-18 95.1 100 50.0
BcaC01g02062 Brassica carinata HOM05D000003 ORTHO05D001498 4.7e-18 94.7 100 50.0
BcaC04g21923 Brassica carinata HOM05D000003 ORTHO05D001498 8.0e-18 94.0 100 50.0
BcaB05g24269 Brassica carinata HOM05D000003 ORTHO05D001498 2.3e-17 92.4 99 52.5
BcaB07g33382 Brassica carinata HOM05D000003 ORTHO05D001498 5.2e-17 91.3 105 41.0
BcaC06g34125 Brassica carinata HOM05D000003 ORTHO05D001498 5.2e-17 91.3 98 49.0
BcaC06g35751 Brassica carinata HOM05D000003 ORTHO05D001498 5.2e-17 91.3 99 48.5
BolC7t41603H Brassica oleracea HOM05D000003 ORTHO05D001498 5.2e-17 91.3 99 48.5
BcaB02g11061 Brassica carinata HOM05D000003 ORTHO05D001498 6.8e-17 90.9 110 44.5
BcaC01g02414 Brassica carinata HOM05D000003 ORTHO05D001498 6.8e-17 90.9 100 48.0
BcaC05g26925 Brassica carinata HOM05D000003 ORTHO05D001498 1.5e-16 89.7 97 49.5
BolC5t31499H Brassica oleracea HOM05D000003 ORTHO05D001498 1.5e-16 89.7 97 49.5
BcaB05g24488 Brassica carinata HOM05D000003 ORTHO05D001498 2.6e-16 89.0 98 50.0
BcaC05g24726 Brassica carinata HOM05D000003 ORTHO05D001498 3.4e-16 88.6 82 57.3
BolC8t47986H Brassica oleracea HOM05D000003 ORTHO05D001498 3.4e-16 88.6 98 49.0
BcaC04g23343 Brassica carinata HOM05D000003 ORTHO05D001498 9.8e-16 87.0 105 43.8
BolC3t15769H Brassica oleracea HOM05D000003 ORTHO05D001498 1.3e-15 86.7 91 48.4
A07p08900 Brassica napus HOM05D000003 ORTHO05D001498 2.2e-15 85.9 91 48.4
BolC7t41060H Brassica oleracea HOM05D000003 ORTHO05D001498 2.2e-15 85.9 98 44.9
Thhalv10009535m.g Eutrema salsugineum HOM05D000003 ORTHO05D001498 2.9e-15 85.5 91 48.4
BolC2t10628H Brassica oleracea HOM05D000003 ORTHO05D001498 1.4e-14 83.2 92 44.6
BolC4t24029H Brassica oleracea HOM05D000003 ORTHO05D001498 1.4e-14 83.2 92 44.6
BcaB03g11737 Brassica carinata HOM05D000003 ORTHO05D001498 1.9e-14 82.8 100 47.0
BolC3t19098H Brassica oleracea HOM05D000003 ORTHO05D001498 2.4e-14 82.4 92 44.6
BcaC07g37622 Brassica carinata HOM05D000003 ORTHO05D001498 3.2e-14 82.0 89 49.4
BraA02t08383Z Brassica rapa HOM05D000003 ORTHO05D001498 3.2e-14 82.0 98 48.0
BcaC05g28342 Brassica carinata HOM05D000003 ORTHO05D001498 4.1e-14 81.6 101 46.5
A01p24260 Brassica napus HOM05D000003 ORTHO05D001498 5.4e-14 81.3 99 44.4
BcaB02g11065 Brassica carinata HOM05D000003 ORTHO05D001498 9.2e-14 80.5 90 46.7
BcaC01g01267 Brassica carinata HOM05D000003 ORTHO05D001498 1.2e-13 80.1 96 44.8
BolC3t21319H Brassica oleracea HOM05D000003 ORTHO05D001498 1.2e-13 80.1 96 44.8
BcaC04g20578 Brassica carinata HOM05D000003 ORTHO05D001498 4.6e-13 78.2 99 46.5
BcaB07g33892 Brassica carinata HOM05D000003 ORTHO05D001498 7.8e-13 77.4 97 41.2
BolC9t56575H Brassica oleracea HOM05D000003 ORTHO05D001498 1.0e-12 77.0 92 40.2
BraA01t02684Z Brassica rapa HOM05D000003 ORTHO05D001498 1.0e-12 77.0 92 45.7
BcaB07g33522 Brassica carinata HOM05D000003 ORTHO05D001498 3.3e-11 72.0 83 49.4
BolC1t05049H Brassica oleracea HOM05D000003 ORTHO05D001498 3.3e-11 72.0 87 43.7
BolC4t25964H Brassica oleracea HOM05D000003 ORTHO05D001498 2.1e-10 69.3 99 42.4
AT5G19270 Arabidopsis thaliana HOM05D000003 ORTHO05D001498 6.2e-10 67.8 99 39.4
BolC7t43894H Brassica oleracea HOM05D000003 ORTHO05D001498 5.2e-09 64.7 77 45.5
BolC5t33760H Brassica oleracea HOM05D000003 ORTHO05D001498 1.5e-08 63.2 55 60.0
CARHR104190 Cardamine hirsuta HOM05D000003 ORTHO05D001498 1.5e-08 63.2 97 36.1
BolC6t38050H Brassica oleracea HOM05D000003 ORTHO05D001498 2.0e-08 62.8 76 47.4
BolC7t44523H Brassica oleracea HOM05D000003 ORTHO05D001498 2.0e-08 62.8 55 52.7
BolC4t23645H Brassica oleracea HOM05D000003 ORTHO05D001498 3.4e-08 62.0 89 38.2
BraA01t02339Z Brassica rapa HOM05D000003 ORTHO05D001498 3.4e-08 62.0 99 37.4
CARHR217290 Cardamine hirsuta HOM05D000003 ORTHO05D001498 7.5e-08 60.8 85 40.0
BcaB01g06093 Brassica carinata HOM05D000003 ORTHO05D001498 9.9e-08 60.5 74 45.9
BcaC08g44709 Brassica carinata HOM05D000003 ORTHO05D001498 1.3e-07 60.1 97 40.2
C06p28800 Brassica napus HOM05D001537 ORTHO05D002595 1.7e-07 59.7 75 46.7
AL4G33730 Arabidopsis lyrata HOM05D000419 ORTHO05D000692 2.2e-07 59.3 96 33.3
C04p57830 Brassica napus HOM05D011995 ORTHO05D013945 2.2e-07 59.3 106 37.7
AL5G23780 Arabidopsis lyrata HOM05D000003 ORTHO05D001498 2.9e-07 58.9 97 36.1
BcaB02g11485 Brassica carinata HOM05D000003 ORTHO05D011793 3.7e-07 58.5 79 44.3
Sp7g03745 Schrenkiella parvula HOM05D000003 ORTHO05D001498 1.4e-06 56.6 99 35.4
BcaC08g45277 Brassica carinata HOM05D000003 ORTHO05D001498 1.9e-06 56.2 75 44.0
BcaC09g51327 Brassica carinata HOM05D000003 ORTHO05D001498 1.9e-06 56.2 54 53.7
BraA01t03967Z Brassica rapa HOM05D000003 ORTHO05D043090 1.9e-06 56.2 102 33.3
BraA09t38509Z Brassica rapa HOM05D000003 ORTHO05D001498 3.2e-06 55.5 77 42.9
BolC5t32128H Brassica oleracea HOM05D000003 ORTHO05D001498 5.4e-06 54.7 54 55.6
BolC6t38701H Brassica oleracea HOM05D000003 ORTHO05D043090 5.4e-06 54.7 100 30.0
BraA01t02966Z Brassica rapa HOM05D000003 ORTHO05D014927 5.4e-06 54.7 89 33.7
Sp7g04630 Schrenkiella parvula HOM05D000003 ORTHO05D001498 7.1e-06 54.3 90 35.6


User provided reference genes

Program Settings