Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g21299 Brassica carinata HOM05D011695 ORTHO05D020037 3.0e-51 204.9 106 100.0
BcaC04g21301 Brassica carinata HOM05D011695 ORTHO05D020037 3.1e-40 168.3 88 100.0
BraA08t32995Z Brassica rapa HOM05D011695 ORTHO05D020037 2.6e-34 148.7 90 90.0
BcaC02g10045 Brassica carinata HOM05D000211 ORTHO05D010904 8.3e-33 143.7 90 86.7
C04p33560 Brassica napus HOM05D000211 ORTHO05D010904 8.3e-33 143.7 90 86.7
BolC4t24922H Brassica oleracea HOM05D000211 ORTHO05D010904 8.3e-33 143.7 90 86.7
BcaC02g10133 Brassica carinata HOM05D000211 ORTHO05D010904 9.2e-32 140.2 90 84.4
C04p32470 Brassica napus HOM05D011695 ORTHO05D020037 9.2e-32 140.2 90 84.4
BolC4t24804H Brassica oleracea HOM05D000211 ORTHO05D010904 9.2e-32 140.2 90 84.4
BcaC02g10136 Brassica carinata HOM05D000211 ORTHO05D010904 5.9e-31 137.5 90 83.3
BolC4t24794H Brassica oleracea HOM05D000211 ORTHO05D010904 5.9e-31 137.5 90 83.3
C03p71640 Brassica napus HOM05D011695 ORTHO05D020037 2.6e-18 95.5 47 97.9
BolC2t10220H Brassica oleracea HOM05D011695 ORTHO05D020037 2.6e-18 95.5 47 97.9
C04p24100 Brassica napus HOM05D011695 ORTHO05D017500 9.8e-18 93.6 47 95.7
BolC4t23907H Brassica oleracea HOM05D011695 ORTHO05D020037 9.8e-18 93.6 47 95.7
C02p41390 Brassica napus HOM05D011695 ORTHO05D017500 4.9e-17 91.3 47 93.6
Sp5g05630 Schrenkiella parvula HOM05D000211 ORTHO05D001399 7.8e-07 57.4 78 46.2
BcaC07g40103 Brassica carinata HOM05D000211 ORTHO05D001399 1.3e-06 56.6 82 45.1
THA.LOC104820738 Tarenaya hassleriana HOM05D000211 ORTHO05D001399 2.3e-06 55.8 95 37.9
AL3G13960 Arabidopsis lyrata HOM05D000211 ORTHO05D001399 3.0e-06 55.5 94 38.3
AT3G04050 Arabidopsis thaliana HOM05D000211 ORTHO05D001399 3.0e-06 55.5 94 38.3
BcaC07g40009 Brassica carinata HOM05D000211 ORTHO05D004230 3.0e-06 55.5 82 42.7
A09p49860 Brassica napus HOM05D000211 ORTHO05D001399 5.1e-06 54.7 82 42.7
BraA09t40437Z Brassica rapa HOM05D000211 ORTHO05D001399 5.1e-06 54.7 82 42.7
Carub.0003s0329 Capsella rubella HOM05D000211 ORTHO05D001399 5.1e-06 54.7 94 36.2


User provided reference genes

Program Settings