Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g21270 Brassica carinata HOM05D007462 ORTHO05D002086 1.3e-41 172.6 82 100.0
BraA02t08314Z Brassica rapa HOM05D007462 ORTHO05D002086 1.4e-35 152.5 80 88.8
BraA01t02729Z Brassica rapa HOM05D007462 ORTHO05D002086 6.9e-35 150.2 80 87.5
BcaC07g37477 Brassica carinata HOM05D007462 ORTHO05D002086 5.4e-32 140.6 78 83.3
BolC8t47797H Brassica oleracea HOM05D007462 ORTHO05D002086 5.4e-32 140.6 78 83.3
BolC2t08565H Brassica oleracea HOM05D007462 ORTHO05D002086 1.6e-31 139.0 77 84.4
BolC3t19061H Brassica oleracea HOM05D007462 ORTHO05D002086 4.6e-31 137.5 77 83.1
BolC1t01191H Brassica oleracea HOM05D007462 ORTHO05D002086 1.0e-30 136.3 77 83.1
BolC8t48748H Brassica oleracea HOM05D007462 ORTHO05D002086 1.0e-30 136.3 80 81.2
BcaC02g11886 Brassica carinata HOM05D007462 ORTHO05D002086 1.9e-29 132.1 79 78.5
BcaC01g02140 Brassica carinata HOM05D007462 ORTHO05D002086 9.6e-29 129.8 73 82.2
BcaC02g07772 Brassica carinata HOM05D007462 ORTHO05D002086 1.8e-27 125.6 70 82.9
BcaC06g36027 Brassica carinata HOM05D007462 ORTHO05D002086 1.8e-27 125.6 70 82.9
BcaC03g14955 Brassica carinata HOM05D007462 ORTHO05D002086 4.0e-27 124.4 70 81.4
BcaC01g02056 Brassica carinata HOM05D007462 ORTHO05D002086 1.5e-26 122.5 70 80.0
BcaC06g36483 Brassica carinata HOM05D007462 ORTHO05D002086 2.0e-26 122.1 72 77.8
BcaC05g28261 Brassica carinata HOM05D007462 ORTHO05D002086 2.2e-25 118.6 75 76.0
BraA07t28690Z Brassica rapa HOM05D007462 ORTHO05D002086 7.9e-23 110.2 81 65.4
BcaC07g38321 Brassica carinata HOM05D001379 ORTHO05D001277 4.8e-20 100.9 57 82.5
BcaC04g21573 Brassica carinata HOM05D007462 ORTHO05D002086 6.2e-20 100.5 80 62.5
BraA05t20484Z Brassica rapa HOM05D007462 ORTHO05D002086 8.1e-20 100.1 51 90.2
BraA07t28124Z Brassica rapa HOM05D007462 ORTHO05D002086 1.1e-19 99.8 80 65.0
BcaC05g28128 Brassica carinata HOM05D007462 ORTHO05D002086 1.8e-19 99.0 88 56.8
BcaB02g11355 Brassica carinata HOM05D007462 ORTHO05D002086 1.2e-18 96.3 80 55.0
BraA01t03543Z Brassica rapa HOM05D007462 ORTHO05D002086 3.4e-18 94.7 76 65.8
BcaC09g49265 Brassica carinata HOM05D007462 ORTHO05D002086 5.8e-18 94.0 80 55.0
C02p52100 Brassica napus HOM05D007462 ORTHO05D002086 3.8e-17 91.3 77 53.2
BcaB04g17689 Brassica carinata HOM05D007462 ORTHO05D002086 6.5e-17 90.5 80 56.2
BcaB06g26738 Brassica carinata HOM05D007462 ORTHO05D002086 8.4e-17 90.1 80 55.0
BolC2t11294H Brassica oleracea HOM05D006289 ORTHO05D002086 1.9e-16 89.0 77 51.9
BolC4t27363H Brassica oleracea HOM05D007462 ORTHO05D002086 3.2e-16 88.2 88 50.0
C04p58390 Brassica napus HOM05D007462 ORTHO05D002086 4.2e-16 87.8 88 50.0
BraA05t20011Z Brassica rapa HOM05D007462 ORTHO05D002086 4.2e-16 87.8 77 55.8
BolC6t36760H Brassica oleracea HOM05D007462 ORTHO05D002086 5.5e-16 87.4 80 52.5
BcaC08g44171 Brassica carinata HOM05D007462 ORTHO05D002086 9.3e-16 86.7 80 52.5
BraA05t21229Z Brassica rapa HOM05D007462 ORTHO05D002086 9.3e-16 86.7 89 50.6
BcaC04g20658 Brassica carinata HOM05D007462 ORTHO05D002086 1.2e-15 86.3 80 48.8
BcaB02g10757 Brassica carinata HOM05D007462 ORTHO05D002086 1.6e-15 85.9 81 55.6
BcaB04g20307 Brassica carinata HOM05D007462 ORTHO05D002086 1.6e-15 85.9 72 54.2
BcaC06g34269 Brassica carinata HOM05D007462 ORTHO05D002086 2.1e-15 85.5 80 48.8
BolC4t26247H Brassica oleracea HOM05D007462 ORTHO05D002086 2.7e-15 85.1 80 51.2
BcaC01g03692 Brassica carinata HOM05D007462 ORTHO05D002086 4.6e-15 84.3 80 47.5
BraA01t02125Z Brassica rapa HOM05D007462 ORTHO05D002086 1.3e-14 82.8 79 50.6
BraA05t21161Z Brassica rapa HOM05D007462 ORTHO05D002086 2.3e-14 82.0 70 61.4
BcaB05g22457 Brassica carinata HOM05D007462 ORTHO05D002086 3.9e-14 81.3 65 58.5
BolC4t23471H Brassica oleracea HOM05D007462 ORTHO05D002086 1.1e-13 79.7 65 55.4
BolC7t41293H Brassica oleracea HOM05D007462 ORTHO05D002086 1.6e-12 75.9 70 58.6
BolC5t32981H Brassica oleracea HOM05D007462 ORTHO05D002086 1.2e-10 69.7 69 56.5
Aa31LG2G13790 Aethionema arabicum HOM05D007462 ORTHO05D002086 5.8e-10 67.4 64 48.4
BcaB04g19811 Brassica carinata HOM05D007462 ORTHO05D002086 7.6e-10 67.0 79 41.8
BcaC02g11196 Brassica carinata HOM05D007462 ORTHO05D002086 1.0e-09 66.6 54 55.6
CARHR293330 Cardamine hirsuta HOM05D000675 ORTHO05D002086 5.0e-09 64.3 79 39.2
BcaC05g25361 Brassica carinata HOM05D000675 ORTHO05D002086 6.5e-09 63.9 72 43.1
Thhalv10012038m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 6.5e-09 63.9 78 39.7
C06p46000 Brassica napus HOM05D007462 ORTHO05D002086 8.4e-09 63.5 74 39.2
CARHR148640 Cardamine hirsuta HOM05D000675 ORTHO05D002086 8.4e-09 63.5 70 45.7
BcaNung00058 Brassica carinata HOM05D007462 ORTHO05D011074 1.4e-08 62.8 76 39.5
BcaB08g34481 Brassica carinata HOM05D000675 ORTHO05D002086 1.9e-08 62.4 71 43.7
BcaC06g33699 Brassica carinata HOM05D007462 ORTHO05D011074 2.5e-08 62.0 76 39.5
A05p23610 Brassica napus HOM05D007462 ORTHO05D002086 2.5e-08 62.0 82 43.9
BcaC01g04891 Brassica carinata HOM05D007462 ORTHO05D011074 3.2e-08 61.6 76 39.5
BcaB03g15657 Brassica carinata HOM05D000675 ORTHO05D002086 4.2e-08 61.2 72 43.1
AT5G15690 Arabidopsis thaliana HOM05D000675 ORTHO05D002086 9.3e-08 60.1 75 36.0
AL22U10020 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 1.2e-07 59.7 78 35.9
AT4G04775 Arabidopsis thaliana HOM05D000675 ORTHO05D002086 1.2e-07 59.7 75 36.0
CARHR151940 Cardamine hirsuta HOM05D000675 ORTHO05D002086 1.2e-07 59.7 74 41.9
AL2G18820 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 2.1e-07 58.9 78 35.9
AL4G16420 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 2.1e-07 58.9 78 35.9
AL1G49470 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 2.7e-07 58.5 69 40.6
AL9U10420 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 2.7e-07 58.5 69 40.6
BcaB05g21895 Brassica carinata HOM05D000675 ORTHO05D002086 2.7e-07 58.5 80 33.8
BcaB05g22219 Brassica carinata HOM05D000675 ORTHO05D002086 2.7e-07 58.5 80 33.8
BcaC03g14861 Brassica carinata HOM05D007462 ORTHO05D011074 2.7e-07 58.5 74 39.2
BcaC06g35958 Brassica carinata HOM05D001379 ORTHO05D001277 2.7e-07 58.5 37 70.3
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 3.5e-07 58.2 75 37.3
BcaC03g17084 Brassica carinata HOM05D007462 ORTHO05D011074 3.5e-07 58.2 76 38.2
BcaC08g44362 Brassica carinata HOM05D000675 ORTHO05D002086 3.5e-07 58.2 79 34.2
C04p26820 Brassica napus HOM05D000675 ORTHO05D002086 3.5e-07 58.2 75 41.3
AT2G07505 Arabidopsis thaliana HOM05D007693 ORTHO05D002086 7.9e-07 57.0 68 42.6
BcaC01g04356 Brassica carinata HOM05D000675 ORTHO05D002086 7.9e-07 57.0 68 41.2
BolC6t36479H Brassica oleracea HOM05D000977 ORTHO05D001094 7.9e-07 57.0 72 38.9
BcaC02g11404 Brassica carinata HOM05D000675 ORTHO05D002086 1.0e-06 56.6 80 33.8
BcaC03g15594 Brassica carinata HOM05D000675 ORTHO05D002086 1.0e-06 56.6 79 35.4
BraA06t24544Z Brassica rapa HOM05D007693 ORTHO05D002086 1.0e-06 56.6 75 32.0
Carub.0003s2743 Capsella rubella HOM05D000675 ORTHO05D002086 1.0e-06 56.6 73 39.7
BcaC05g26662 Brassica carinata HOM05D007462 ORTHO05D011074 1.3e-06 56.2 76 38.2
BcaC05g27351 Brassica carinata HOM05D000675 ORTHO05D002086 1.3e-06 56.2 80 32.5
BcaC05g27596 Brassica carinata HOM05D000675 ORTHO05D002086 1.3e-06 56.2 79 35.4
BcaB05g23148 Brassica carinata HOM05D007693 ORTHO05D002086 1.8e-06 55.8 71 33.8
BcaB06g27481 Brassica carinata HOM05D007693 ORTHO05D002086 1.8e-06 55.8 75 34.7
BraA04t16110Z Brassica rapa HOM05D000675 ORTHO05D002086 1.8e-06 55.8 75 37.3
SpUn1230_0020 Schrenkiella parvula HOM05D007693 ORTHO05D002086 1.8e-06 55.8 81 42.0
BcaB04g17468 Brassica carinata HOM05D007462 ORTHO05D011074 2.3e-06 55.5 83 36.1
BcaB04g18535 Brassica carinata HOM05D000675 ORTHO05D002086 2.3e-06 55.5 68 38.2
BcaB05g22684 Brassica carinata HOM05D007693 ORTHO05D002086 2.3e-06 55.5 68 42.6
BcaC05g25703 Brassica carinata HOM05D000675 ORTHO05D002086 2.3e-06 55.5 79 34.2
BcaC08g42855 Brassica carinata HOM05D000675 ORTHO05D002086 2.3e-06 55.5 79 34.2
BolC4t25938H Brassica oleracea HOM05D000675 ORTHO05D002086 2.3e-06 55.5 72 38.9
BraA10t42989Z Brassica rapa HOM05D007693 ORTHO05D002086 2.3e-06 55.5 70 41.4
BcaB05g24191 Brassica carinata HOM05D000675 ORTHO05D002086 3.0e-06 55.1 80 35.0
BcaC08g43955 Brassica carinata HOM05D000675 ORTHO05D032734 3.0e-06 55.1 75 34.7
BcaC08g44148 Brassica carinata HOM05D007462 ORTHO05D011074 3.0e-06 55.1 76 36.8
BolC6t36520H Brassica oleracea HOM05D000675 ORTHO05D032734 3.0e-06 55.1 75 34.7
BcaB03g14368 Brassica carinata HOM05D000675 ORTHO05D002086 3.9e-06 54.7 80 31.2
BcaC01g05867 Brassica carinata HOM05D007462 ORTHO05D011074 3.9e-06 54.7 76 38.2
BcaC04g22910 Brassica carinata HOM05D007462 ORTHO05D011074 3.9e-06 54.7 76 38.2
BcaC06g33294 Brassica carinata HOM05D007693 ORTHO05D002086 3.9e-06 54.7 59 44.1
BcaC07g38352 Brassica carinata HOM05D007462 ORTHO05D011074 3.9e-06 54.7 76 38.2
BcaC09g49807 Brassica carinata HOM05D000675 ORTHO05D002086 3.9e-06 54.7 80 31.2
BcaC09g51285 Brassica carinata HOM05D000675 ORTHO05D002086 3.9e-06 54.7 72 37.5
A05p16290 Brassica napus HOM05D000675 ORTHO05D002086 3.9e-06 54.7 69 39.1
C01p14800 Brassica napus HOM05D000675 ORTHO05D002086 3.9e-06 54.7 72 37.5
BolC1t02623H Brassica oleracea HOM05D007462 ORTHO05D011074 3.9e-06 54.7 76 38.2
THA.LOC104804713 Tarenaya hassleriana HOM05D007462 ORTHO05D002086 3.9e-06 54.7 74 36.5
BcaB07g32457 Brassica carinata HOM05D007462 ORTHO05D002086 5.1e-06 54.3 79 34.2
BcaC01g01799 Brassica carinata HOM05D007462 ORTHO05D011074 5.1e-06 54.3 74 37.8
BcaC02g11566 Brassica carinata HOM05D007462 ORTHO05D011074 5.1e-06 54.3 73 38.4
BcaC05g28653 Brassica carinata HOM05D007462 ORTHO05D011074 5.1e-06 54.3 76 38.2
AT2G06265 Arabidopsis thaliana HOM05D007693 ORTHO05D002086 6.7e-06 53.9 81 34.6
BcaC09g48980 Brassica carinata HOM05D000675 ORTHO05D002086 6.7e-06 53.9 79 36.7
BcaC09g48982 Brassica carinata HOM05D000675 ORTHO05D002086 6.7e-06 53.9 79 36.7
BcaC09g50385 Brassica carinata HOM05D000675 ORTHO05D002086 6.7e-06 53.9 80 32.5
C02p48400 Brassica napus HOM05D000675 ORTHO05D002086 6.7e-06 53.9 77 37.7
BolC6t38866H Brassica oleracea HOM05D000675 ORTHO05D002086 6.7e-06 53.9 73 35.6
BolC4t25850H Brassica oleracea HOM05D000675 ORTHO05D002086 8.7e-06 53.5 75 36.0
BolC8t48273H Brassica oleracea HOM05D000589 ORTHO05D001885 8.7e-06 53.5 69 36.2


User provided reference genes

Program Settings