Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g21257 Brassica carinata HOM05D028539 ORTHO05D014854 1.1e-72 276.6 140 100.0
BcaB01g01769 Brassica carinata HOM05D028539 ORTHO05D014854 1.7e-57 226.1 162 75.3
C09p33770 Brassica napus HOM05D000051 ORTHO05D014854 4.9e-41 171.4 396 35.1
BolC9t56213H Brassica oleracea HOM05D000051 ORTHO05D014854 4.9e-41 171.4 396 35.1
BraA09t38237Z Brassica rapa HOM05D000051 ORTHO05D014854 1.4e-35 153.3 396 33.1
A09p26640 Brassica napus HOM05D000051 ORTHO05D014854 2.1e-31 139.4 114 68.4
CARHR253510 Cardamine hirsuta HOM05D028539 ORTHO05D014854 3.5e-15 85.5 62 67.7
AL6G30120 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.5e-13 80.1 68 63.2
AT5G18770 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.9e-13 79.7 68 63.2
Thhalv10013420m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.3e-13 79.0 71 54.9
BcaB01g04894 Brassica carinata HOM05D000051 ORTHO05D000015 5.7e-13 78.2 72 58.3
Sp6g25610 Schrenkiella parvula HOM05D000051 ORTHO05D000015 9.6e-13 77.4 60 65.0
C03p10650 Brassica napus HOM05D000051 ORTHO05D000015 6.3e-12 74.7 72 56.9
BolC3t13541H Brassica oleracea HOM05D000051 ORTHO05D016813 1.1e-11 73.9 72 56.9
AL6G47630 Arabidopsis lyrata HOM05D000051 ORTHO05D014854 1.4e-11 73.6 53 69.8
CARHR194210 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.4e-11 72.8 66 59.1
BcaB01g04891 Brassica carinata HOM05D000051 ORTHO05D000015 3.1e-11 72.4 60 63.3
BcaB01g04892 Brassica carinata HOM05D000051 ORTHO05D016813 5.3e-11 71.6 64 59.4
A03p09110 Brassica napus HOM05D000051 ORTHO05D016813 9.0e-11 70.9 72 55.6
BraA03t10235Z Brassica rapa HOM05D000051 ORTHO05D016813 2.6e-10 69.3 72 54.2
BcaB01g04893 Brassica carinata HOM05D000051 ORTHO05D000015 5.9e-10 68.2 116 43.1
AL6G30130 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.3e-09 67.0 60 56.7
BraA03t10234Z Brassica rapa HOM05D000051 ORTHO05D016813 1.3e-09 67.0 69 50.7
BcaB01g04556 Brassica carinata HOM05D000051 ORTHO05D000015 2.9e-09 65.9 67 53.7
C03p10600 Brassica napus HOM05D000160 ORTHO05D000914 2.9e-09 65.9 69 50.7
C03p10610 Brassica napus HOM05D000051 ORTHO05D016813 3.8e-09 65.5 69 56.5
C03p10630 Brassica napus HOM05D000051 ORTHO05D000015 5.0e-09 65.1 97 41.2
BcaB01g05272 Brassica carinata HOM05D000051 ORTHO05D016813 8.5e-09 64.3 71 47.9
A03p09100 Brassica napus HOM05D000051 ORTHO05D016813 1.1e-08 63.9 69 49.3
BcaB01g05273 Brassica carinata HOM05D000051 ORTHO05D000015 2.5e-08 62.8 60 53.3
A03p09120 Brassica napus HOM05D000051 ORTHO05D014854 2.5e-08 62.8 111 43.2
AT5G18780 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 4.2e-08 62.0 60 55.0
BolC3t13877H Brassica oleracea HOM05D000051 ORTHO05D000015 4.2e-08 62.0 95 43.2
Carub.0002s0732 Capsella rubella HOM05D000051 ORTHO05D000015 2.7e-07 59.3 60 56.7
BcaNung05148 Brassica carinata HOM05D028539 ORTHO05D014854 3.6e-07 58.9 62 51.6
C03p10620 Brassica napus HOM05D000051 ORTHO05D016813 4.6e-07 58.5 70 47.1


User provided reference genes

Program Settings