Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g21125 Brassica carinata HOM05D000589 ORTHO05D001885 2.2e-38 161.8 80 100.0
BcaB07g32905 Brassica carinata HOM05D000589 ORTHO05D001885 3.1e-16 88.2 60 80.0
BcaC02g08655 Brassica carinata HOM05D000589 ORTHO05D001885 5.3e-16 87.4 60 80.0
BcaC05g28209 Brassica carinata HOM05D000589 ORTHO05D001885 5.5e-13 77.4 62 67.7
BcaC05g25870 Brassica carinata HOM05D000589 ORTHO05D001885 2.1e-12 75.5 62 64.5
BcaC02g08590 Brassica carinata HOM05D000589 ORTHO05D001885 4.7e-12 74.3 60 70.0
BcaC04g19792 Brassica carinata HOM05D000589 ORTHO05D001885 1.0e-11 73.2 62 62.9
BcaB02g07028 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-11 72.8 62 66.1
BcaB02g07029 Brassica carinata HOM05D000589 ORTHO05D001885 3.0e-11 71.6 70 60.0
BcaB06g26227 Brassica carinata HOM05D000589 ORTHO05D001885 4.0e-11 71.2 72 58.3
BcaC08g45829 Brassica carinata HOM05D000589 ORTHO05D001885 4.0e-11 71.2 60 61.7
BcaC02g12351 Brassica carinata HOM05D000589 ORTHO05D001885 5.2e-11 70.9 60 66.7
BcaC04g21586 Brassica carinata HOM05D000589 ORTHO05D001885 5.2e-11 70.9 60 65.0
BcaC07g38282 Brassica carinata HOM05D000589 ORTHO05D001885 6.7e-11 70.5 60 68.3
BcaC06g33454 Brassica carinata HOM05D000589 ORTHO05D001885 3.3e-10 68.2 60 66.7
BcaC02g11767 Brassica carinata HOM05D000589 ORTHO05D001885 5.7e-10 67.4 60 58.3
BcaB05g22907 Brassica carinata HOM05D000589 ORTHO05D001885 9.7e-10 66.6 60 61.7
BcaC03g14470 Brassica carinata HOM05D000589 ORTHO05D001885 1.3e-09 66.2 56 64.3
BcaC05g25264 Brassica carinata HOM05D000589 ORTHO05D001885 1.3e-09 66.2 60 58.3
BcaB04g18988 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-09 65.9 58 58.6
BcaB01g01446 Brassica carinata HOM05D000589 ORTHO05D001885 2.2e-09 65.5 79 51.9
BcaB01g02139 Brassica carinata HOM05D000589 ORTHO05D001885 2.2e-09 65.5 79 51.9
BcaC01g05797 Brassica carinata HOM05D000589 ORTHO05D001885 2.8e-09 65.1 59 59.3
BcaB01g05554 Brassica carinata HOM05D000589 ORTHO05D001885 4.8e-09 64.3 58 62.1
BcaB05g24472 Brassica carinata HOM05D000589 ORTHO05D001885 4.8e-09 64.3 59 55.9
BcaC05g28962 Brassica carinata HOM05D000589 ORTHO05D001885 4.8e-09 64.3 58 62.1
BcaC06g33723 Brassica carinata HOM05D000589 ORTHO05D001885 4.8e-09 64.3 59 55.9
BcaC08g44546 Brassica carinata HOM05D000589 ORTHO05D001885 4.8e-09 64.3 58 60.3
BolC4t25855H Brassica oleracea HOM05D000589 ORTHO05D001885 4.8e-09 64.3 58 62.1
C08p03150 Brassica napus HOM05D000930 ORTHO05D000748 6.3e-09 63.9 59 54.2
BcaB05g21802 Brassica carinata HOM05D000589 ORTHO05D001885 8.2e-09 63.5 60 61.7
BcaC06g35854 Brassica carinata HOM05D002078 ORTHO05D010191 8.2e-09 63.5 56 60.7
BcaC07g40780 Brassica carinata HOM05D000589 ORTHO05D001885 8.2e-09 63.5 60 56.7
BraA04t17042Z Brassica rapa HOM05D000589 ORTHO05D001885 1.8e-08 62.4 58 58.6
BcaB06g26956 Brassica carinata HOM05D000589 ORTHO05D001885 2.4e-08 62.0 74 48.6
BcaC07g38292 Brassica carinata HOM05D000589 ORTHO05D001885 2.4e-08 62.0 68 51.5
BcaB01g01573 Brassica carinata HOM05D000589 ORTHO05D001885 4.1e-08 61.2 59 54.2
BolC8t49278H Brassica oleracea HOM05D000589 ORTHO05D001885 4.1e-08 61.2 58 58.6
BcaB07g32349 Brassica carinata HOM05D000589 ORTHO05D001885 5.3e-08 60.8 60 58.3
BcaC05g28348 Brassica carinata HOM05D000589 ORTHO05D001885 5.3e-08 60.8 60 58.3
BcaC07g38195 Brassica carinata HOM05D000589 ORTHO05D001885 5.3e-08 60.8 62 51.6
BolC4t25876H Brassica oleracea HOM05D000589 ORTHO05D001885 5.3e-08 60.8 62 51.6
BolC7t42427H Brassica oleracea HOM05D000589 ORTHO05D001885 5.3e-08 60.8 58 56.9
BcaC02g08929 Brassica carinata HOM05D000589 ORTHO05D001885 7.0e-08 60.5 62 53.2
BcaC02g08679 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-07 59.7 52 59.6
BcaC03g16729 Brassica carinata HOM05D000589 ORTHO05D004260 1.2e-07 59.7 63 52.4
BolC6t35247H Brassica oleracea HOM05D000589 ORTHO05D001885 1.2e-07 59.7 60 56.7
BcaC04g22653 Brassica carinata HOM05D000589 ORTHO05D016749 2.0e-07 58.9 56 57.1
BraA02t07620Z Brassica rapa HOM05D000589 ORTHO05D001885 2.0e-07 58.9 59 54.2
BcaC04g18907 Brassica carinata HOM05D000589 ORTHO05D001885 2.7e-07 58.5 56 57.1
BcaB06g28242 Brassica carinata HOM05D000589 ORTHO05D001885 3.5e-07 58.2 61 59.0
BcaB07g33413 Brassica carinata HOM05D000589 ORTHO05D001885 3.5e-07 58.2 40 70.0
BcaC05g29611 Brassica carinata HOM05D000589 ORTHO05D000401 3.5e-07 58.2 51 60.8
BcaNung04078 Brassica carinata HOM05D000589 ORTHO05D001885 3.5e-07 58.2 61 59.0
BcaC03g18153 Brassica carinata HOM05D000589 ORTHO05D001885 4.5e-07 57.8 71 47.9
BcaC05g29003 Brassica carinata HOM05D000589 ORTHO05D001885 4.5e-07 57.8 74 48.6
BcaB02g11539 Brassica carinata HOM05D000589 ORTHO05D001885 5.9e-07 57.4 40 70.0
BcaB08g36271 Brassica carinata HOM05D000589 ORTHO05D001885 7.7e-07 57.0 58 50.0
BcaC01g00898 Brassica carinata HOM05D000589 ORTHO05D001885 1.0e-06 56.6 56 55.4
BcaC06g35166 Brassica carinata HOM05D000589 ORTHO05D001885 1.0e-06 56.6 56 55.4
BcaB04g17413 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-06 55.8 40 67.5
BcaC01g01963 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-06 55.8 56 53.6
BcaNung05686 Brassica carinata HOM05D000589 ORTHO05D090921 1.7e-06 55.8 40 67.5
BcaC04g20928 Brassica carinata HOM05D000589 ORTHO05D001885 2.2e-06 55.5 59 54.2
BcaC05g25328 Brassica carinata HOM05D000589 ORTHO05D001885 2.2e-06 55.5 60 53.3
BcaB02g10869 Brassica carinata HOM05D000589 ORTHO05D001885 2.9e-06 55.1 56 55.4
BcaC03g15149 Brassica carinata HOM05D000589 ORTHO05D001885 3.8e-06 54.7 60 51.7
BolC8t48988H Brassica oleracea HOM05D000589 ORTHO05D001885 3.8e-06 54.7 52 57.7
BcaB01g01135 Brassica carinata HOM05D000589 ORTHO05D001885 5.0e-06 54.3 40 65.0
BcaC08g45067 Brassica carinata HOM05D000589 ORTHO05D001885 5.0e-06 54.3 39 64.1
BcaC08g45585 Brassica carinata HOM05D000589 ORTHO05D001885 6.5e-06 53.9 50 58.0
BraA01t03046Z Brassica rapa HOM05D000589 ORTHO05D001885 6.5e-06 53.9 61 55.7
BraA07t28350Z Brassica rapa HOM05D000589 ORTHO05D001885 6.5e-06 53.9 61 55.7
BraA08t32605Z Brassica rapa HOM05D000589 ORTHO05D001885 6.5e-06 53.9 61 55.7
BcaC08g46754 Brassica carinata HOM05D000589 ORTHO05D001885 8.5e-06 53.5 53 54.7


User provided reference genes

Program Settings