Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g21104 Brassica carinata HOM05D007759 ORTHO05D008318 2.7e-97 358.6 175 100.0
C09p35650 Brassica napus HOM05D007759 ORTHO05D008318 1.2e-73 280.0 140 100.0
BcaC02g11605 Brassica carinata HOM05D007759 ORTHO05D008318 1.8e-72 276.2 163 85.9
C04p13390 Brassica napus HOM05D007759 ORTHO05D008318 1.8e-72 276.2 163 85.9
A09p35430 Brassica napus HOM05D007759 ORTHO05D008318 8.8e-72 273.9 163 85.9
BraA08t32106Z Brassica rapa HOM05D007759 ORTHO05D008318 8.8e-72 273.9 163 85.9
BcaC05g28733 Brassica carinata HOM05D007759 ORTHO05D008318 2.6e-71 272.3 163 85.3
BolC5t33570H Brassica oleracea HOM05D007759 ORTHO05D008318 2.6e-71 272.3 163 85.3
BcaB04g19215 Brassica carinata HOM05D007759 ORTHO05D008318 1.0e-59 233.8 187 63.1
BolC9t56401H Brassica oleracea HOM05D007759 ORTHO05D008318 1.1e-58 230.3 116 100.0
BcaC05g27963 Brassica carinata HOM05D007759 ORTHO05D008318 4.7e-57 224.9 163 69.9
A07p09660 Brassica napus HOM05D007759 ORTHO05D008318 2.6e-55 219.2 187 59.4
A05p45000 Brassica napus HOM05D007759 ORTHO05D008318 9.8e-55 217.2 187 58.3
A03p64890 Brassica napus HOM05D007759 ORTHO05D008318 1.7e-54 216.5 187 58.3
C01p19090 Brassica napus HOM05D007759 ORTHO05D008318 1.4e-53 213.4 163 68.1
C01p16160 Brassica napus HOM05D007759 ORTHO05D008318 2.4e-53 212.6 128 82.8
BcaNung02441 Brassica carinata HOM05D007759 ORTHO05D008318 5.4e-53 211.5 182 59.3
A05p25410 Brassica napus HOM05D007759 ORTHO05D008318 7.0e-53 211.1 187 56.7
A09p61940 Brassica napus HOM05D007759 ORTHO05D008318 9.1e-53 210.7 187 57.2
BcaC02g10745 Brassica carinata HOM05D007759 ORTHO05D008318 1.6e-52 209.9 146 74.7
BcaC04g19163 Brassica carinata HOM05D007759 ORTHO05D008318 1.6e-52 209.9 140 76.4
C04p25470 Brassica napus HOM05D007759 ORTHO05D008318 1.6e-52 209.9 146 74.7
BolC4t24065H Brassica oleracea HOM05D007759 ORTHO05D008318 1.6e-52 209.9 146 74.7
BolC6t36449H Brassica oleracea HOM05D007759 ORTHO05D008318 2.0e-52 209.5 163 67.5
C01p11620 Brassica napus HOM05D007759 ORTHO05D008318 2.2e-51 206.1 175 63.4
BcaC02g10768 Brassica carinata HOM05D007759 ORTHO05D008318 1.6e-49 199.9 142 72.5
C04p25320 Brassica napus HOM05D007759 ORTHO05D008318 1.6e-49 199.9 142 72.5
C06p12950 Brassica napus HOM05D007759 ORTHO05D008318 3.6e-49 198.7 140 72.1
BcaC08g46655 Brassica carinata HOM05D007759 ORTHO05D008318 1.4e-48 196.8 181 54.7
A07p18500 Brassica napus HOM05D007759 ORTHO05D008318 1.8e-48 196.4 181 54.1
A09p15820 Brassica napus HOM05D007759 ORTHO05D008318 8.8e-48 194.1 181 54.1
A05p26180 Brassica napus HOM05D007759 ORTHO05D008318 1.5e-47 193.4 181 53.6
BcaC03g17946 Brassica carinata HOM05D007759 ORTHO05D008318 2.0e-47 193.0 181 52.5
A07p25500 Brassica napus HOM05D007759 ORTHO05D008318 2.0e-47 193.0 181 54.1
BraA02t06461Z Brassica rapa HOM05D007759 ORTHO05D008318 3.4e-47 192.2 163 60.7
BcaC01g00595 Brassica carinata HOM05D007759 ORTHO05D008318 9.8e-47 190.7 133 72.2
A04p16590 Brassica napus HOM05D007759 ORTHO05D008318 1.3e-46 190.3 181 54.1
BcaC05g25628 Brassica carinata HOM05D007011 ORTHO05D008837 3.1e-45 185.7 181 52.5
BolC6t39668H Brassica oleracea HOM05D000305 ORTHO05D000065 2.5e-42 176.0 167 53.9
A09p16180 Brassica napus HOM05D000305 ORTHO05D000065 7.2e-42 174.5 167 52.7
BraA09t37253Z Brassica rapa HOM05D000305 ORTHO05D000065 7.2e-42 174.5 167 53.3
C02p60070 Brassica napus HOM05D000305 ORTHO05D000065 1.2e-41 173.7 167 51.5
C09p64240 Brassica napus HOM05D007759 ORTHO05D008318 4.7e-41 171.8 116 77.6
BolC9t59261H Brassica oleracea HOM05D007759 ORTHO05D008318 4.7e-41 171.8 116 77.6
BcaC01g02224 Brassica carinata HOM05D007759 ORTHO05D008318 6.1e-41 171.4 162 54.3
C03p67680 Brassica napus HOM05D007759 ORTHO05D008318 6.1e-41 171.4 162 54.3
C01p16170 Brassica napus HOM05D007759 ORTHO05D008318 8.0e-41 171.0 126 72.2
BolSC21t60227H Brassica oleracea HOM05D007759 ORTHO05D008318 1.0e-40 170.6 162 54.3
BcaC09g50938 Brassica carinata HOM05D007759 ORTHO05D008318 6.8e-40 167.9 163 58.3
A09p55860 Brassica napus HOM05D007759 ORTHO05D008318 2.0e-39 166.4 116 74.1
BraA03t13280Z Brassica rapa HOM05D007759 ORTHO05D008318 2.0e-39 166.4 145 56.6
BraA09t40989Z Brassica rapa HOM05D007759 ORTHO05D008318 2.0e-39 166.4 116 74.1
BcaC08g43908 Brassica carinata HOM05D007759 ORTHO05D008318 2.6e-39 166.0 116 73.3
BcaB06g26374 Brassica carinata HOM05D007759 ORTHO05D008318 3.4e-39 165.6 113 76.1
BraA05t20148Z Brassica rapa HOM05D007759 ORTHO05D008318 1.7e-38 163.3 145 56.6
BcaB01g03487 Brassica carinata HOM05D007759 ORTHO05D008318 4.9e-38 161.8 136 63.2
BolC6t39089H Brassica oleracea HOM05D007759 ORTHO05D008318 6.4e-38 161.4 116 71.6
BcaB03g12128 Brassica carinata HOM05D007759 ORTHO05D008318 1.4e-37 160.2 136 62.5
C03p87080 Brassica napus HOM05D007759 ORTHO05D008318 4.1e-37 158.7 117 70.9
BcaB06g27974 Brassica carinata HOM05D000305 ORTHO05D000065 5.4e-37 158.3 135 60.0
BraA05t23159Z Brassica rapa HOM05D007759 ORTHO05D008318 1.7e-35 153.3 141 53.2
BolC5t31112H Brassica oleracea HOM05D007759 ORTHO05D008318 1.5e-31 140.2 98 70.4
BraA06t24735Z Brassica rapa HOM05D007759 ORTHO05D008318 7.5e-31 137.9 116 61.2
BolC1t01835H Brassica oleracea HOM05D007759 ORTHO05D008318 9.8e-31 137.5 106 67.9
BolC3t21010H Brassica oleracea HOM05D007759 ORTHO05D008318 2.9e-30 136.0 99 69.7
BraA03t15551Z Brassica rapa HOM05D007759 ORTHO05D008318 1.4e-29 133.7 116 59.5
BcaC04g21617 Brassica carinata HOM05D007759 ORTHO05D008318 1.2e-28 130.6 101 66.3
BraA08t32755Z Brassica rapa HOM05D007759 ORTHO05D008318 4.3e-26 122.1 175 38.9
BcaB02g07732 Brassica carinata HOM05D007759 ORTHO05D008318 9.5e-26 120.9 172 36.6
BcaNung04086 Brassica carinata HOM05D007759 ORTHO05D008318 4.7e-25 118.6 94 61.7
A08p07380 Brassica napus HOM05D000305 ORTHO05D008318 4.7e-25 118.6 175 38.3
C05p36840 Brassica napus HOM05D000305 ORTHO05D008318 4.7e-25 118.6 170 38.8
BcaC05g27701 Brassica carinata HOM05D007759 ORTHO05D008318 1.1e-24 117.5 170 38.8
BcaC09g51523 Brassica carinata HOM05D007759 ORTHO05D008318 1.1e-24 117.5 170 38.8
A06p29370 Brassica napus HOM05D007759 ORTHO05D008318 4.0e-24 115.5 98 57.1
BolC5t32424H Brassica oleracea HOM05D000305 ORTHO05D008318 1.1e-21 107.5 172 37.8
C08p12830 Brassica napus HOM05D007759 ORTHO05D008318 1.9e-21 106.7 134 44.8
BolC4t24039H Brassica oleracea HOM05D007759 ORTHO05D008318 1.2e-20 104.0 64 81.2
C05p39710 Brassica napus HOM05D007759 ORTHO05D008318 5.1e-19 98.6 93 59.1
A09p01240 Brassica napus HOM05D007759 ORTHO05D008318 1.9e-18 96.7 81 56.8
BolC6t37317H Brassica oleracea HOM05D007759 ORTHO05D008318 5.6e-18 95.1 170 37.1
BcaC01g00980 Brassica carinata HOM05D007759 ORTHO05D008318 2.1e-17 93.2 57 84.2
BcaC09g50078 Brassica carinata HOM05D000305 ORTHO05D000065 2.8e-17 92.8 170 33.5
A05p10430 Brassica napus HOM05D007759 ORTHO05D008318 2.8e-17 92.8 82 56.1
A08p19220 Brassica napus HOM05D007759 ORTHO05D008318 2.6e-15 86.3 64 68.8
BraA08t33884Z Brassica rapa HOM05D007759 ORTHO05D008318 2.6e-15 86.3 64 68.8
BcaB07g32952 Brassica carinata HOM05D007759 ORTHO05D008318 3.7e-14 82.4 56 75.0
C08p08060 Brassica napus HOM05D000313 ORTHO05D000065 5.4e-13 78.6 130 34.6
BolC8t47656H Brassica oleracea HOM05D000096 ORTHO05D000045 1.2e-12 77.4 128 34.4
BraA03t15217Z Brassica rapa HOM05D009716 ORTHO05D008318 1.6e-12 77.0 136 30.1
Carub.0001s4072 Capsella rubella HOM05D007759 ORTHO05D008318 6.0e-12 75.1 185 26.5
BraA04t15920Z Brassica rapa HOM05D009716 ORTHO05D008318 1.7e-11 73.6 134 29.1
BolC1t02858H Brassica oleracea HOM05D007759 ORTHO05D008318 1.1e-10 70.9 158 30.4
Carub.0003s3131 Capsella rubella HOM05D007759 ORTHO05D008318 1.1e-10 70.9 188 26.6
BcaB06g26970 Brassica carinata HOM05D007759 ORTHO05D008318 2.5e-10 69.7 84 39.3
BolC8t48618H Brassica oleracea HOM05D009716 ORTHO05D008318 4.3e-10 68.9 135 28.9
Thhalv10002215m.g Eutrema salsugineum HOM05D007759 ORTHO05D008318 4.3e-10 68.9 161 29.2
BolC1t02876H Brassica oleracea HOM05D000305 ORTHO05D000065 1.6e-09 67.0 158 29.7
BolC7t43125H Brassica oleracea HOM05D009716 ORTHO05D008318 1.6e-09 67.0 124 30.6
C01p29370 Brassica napus HOM05D000305 ORTHO05D000065 6.2e-09 65.1 135 31.9
C01p29320 Brassica napus HOM05D000305 ORTHO05D000065 8.1e-09 64.7 158 29.7
AL4G17992 Arabidopsis lyrata HOM05D007759 ORTHO05D008318 1.4e-08 63.9 101 31.7
BcaC05g27285 Brassica carinata HOM05D009716 ORTHO05D008318 6.8e-08 61.6 121 31.4
BcaB03g15150 Brassica carinata HOM05D009716 ORTHO05D008318 2.9e-06 56.2 113 26.5


User provided reference genes

Program Settings