Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g21102 Brassica carinata HOM05D000337 ORTHO05D092420 1.2e-43 179.5 92 100.0
BcaB01g01585 Brassica carinata HOM05D000337 ORTHO05D000297 6.3e-29 130.6 74 91.9
BcaC04g21101 Brassica carinata HOM05D000337 ORTHO05D000297 6.3e-29 130.6 74 91.9
A09p28150 Brassica napus HOM05D000337 ORTHO05D000297 6.3e-29 130.6 74 91.9
C09p35680 Brassica napus HOM05D000337 ORTHO05D000297 6.3e-29 130.6 74 91.9
BolC9t56404H Brassica oleracea HOM05D000337 ORTHO05D000297 6.3e-29 130.6 74 91.9
BraA09t38378Z Brassica rapa HOM05D000337 ORTHO05D000297 6.3e-29 130.6 74 91.9
Sp6g06360 Schrenkiella parvula HOM05D000337 ORTHO05D000297 1.0e-18 96.7 79 63.3
Thhalv10028674m.g Eutrema salsugineum HOM05D000337 ORTHO05D000297 3.8e-18 94.7 79 63.3
CARHR255510 Cardamine hirsuta HOM05D000337 ORTHO05D000297 1.0e-15 86.7 71 63.4
AL6G45240 Arabidopsis lyrata HOM05D000337 ORTHO05D000297 1.2e-14 83.2 79 58.2
AT4G11090 Arabidopsis thaliana HOM05D000337 ORTHO05D000297 7.5e-14 80.5 79 55.7
Aa31LG9G11100 Aethionema arabicum HOM05D000337 ORTHO05D000297 1.8e-12 75.9 70 52.9
Carub.0006s2986 Capsella rubella HOM05D000337 ORTHO05D000297 2.3e-10 68.9 74 55.4
Carub.0007s1733 Capsella rubella HOM05D000337 ORTHO05D000297 1.8e-07 59.3 71 40.8
BcaNung05928 Brassica carinata HOM05D000337 ORTHO05D000297 2.3e-07 58.9 71 47.9
BcaNung03195 Brassica carinata HOM05D000337 ORTHO05D000297 5.2e-07 57.8 79 45.6
A03p54760 Brassica napus HOM05D000337 ORTHO05D000297 5.2e-07 57.8 79 45.6
C07p53120 Brassica napus HOM05D000337 ORTHO05D000297 5.2e-07 57.8 79 45.6
BolC7t45808H Brassica oleracea HOM05D000337 ORTHO05D000297 5.2e-07 57.8 79 45.6
BraA03t14543Z Brassica rapa HOM05D000337 ORTHO05D000297 5.2e-07 57.8 79 45.6
CARHR231180 Cardamine hirsuta HOM05D000337 ORTHO05D000297 1.5e-06 56.2 71 45.1
THA.LOC104806432 Tarenaya hassleriana HOM05D000337 ORTHO05D000297 3.4e-06 55.1 77 36.4
THA.LOC104814954 Tarenaya hassleriana HOM05D000337 ORTHO05D000297 3.4e-06 55.1 75 38.7
AL7G29560 Arabidopsis lyrata HOM05D000337 ORTHO05D000297 4.4e-06 54.7 71 42.3
Thhalv10025256m.g Eutrema salsugineum HOM05D000337 ORTHO05D000297 5.7e-06 54.3 78 41.0


User provided reference genes

Program Settings