Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g21083 Brassica carinata HOM05D000675 ORTHO05D003044 1.4e-44 182.6 90 100.0
C09p35930 Brassica napus HOM05D000675 ORTHO05D003044 3.4e-27 124.8 115 65.2
BcaC08g44724 Brassica carinata HOM05D000675 ORTHO05D000395 3.1e-20 101.7 68 69.1
C06p22620 Brassica napus HOM05D000675 ORTHO05D013785 3.1e-20 101.7 68 69.1
BolC2t09930H Brassica oleracea HOM05D000675 ORTHO05D000395 3.1e-20 101.7 63 74.6
BolC5t30407H Brassica oleracea HOM05D000675 ORTHO05D003044 3.1e-20 101.7 61 75.4
C05p16990 Brassica napus HOM05D000675 ORTHO05D003044 4.0e-20 101.3 61 75.4
A05p23490 Brassica napus HOM05D000675 ORTHO05D000395 6.8e-20 100.5 58 77.6
BraA05t21216Z Brassica rapa HOM05D000675 ORTHO05D000395 6.8e-20 100.5 58 77.6
BolC5t30672H Brassica oleracea HOM05D000675 ORTHO05D000395 8.9e-20 100.1 55 80.0
BraA04t17363Z Brassica rapa HOM05D000675 ORTHO05D003044 8.9e-20 100.1 58 77.6
A09p33960 Brassica napus HOM05D000675 ORTHO05D003044 5.8e-19 97.4 55 78.2
BraA09t38942Z Brassica rapa HOM05D000675 ORTHO05D003044 5.8e-19 97.4 55 78.2
BcaB01g04897 Brassica carinata HOM05D000675 ORTHO05D000395 1.2e-16 89.7 69 63.8
BolC4t27258H Brassica oleracea HOM05D000675 ORTHO05D020104 2.5e-14 82.0 55 65.5
BcaB05g23575 Brassica carinata HOM05D000675 ORTHO05D003044 9.6e-14 80.1 53 66.0
BcaB06g28325 Brassica carinata HOM05D000675 ORTHO05D003044 2.8e-13 78.6 53 64.2
BcaC02g10973 Brassica carinata HOM05D000675 ORTHO05D003044 2.8e-13 78.6 53 62.3
BcaC09g49239 Brassica carinata HOM05D000675 ORTHO05D003044 2.8e-13 78.6 55 61.8
BolC9t56425H Brassica oleracea HOM05D000675 ORTHO05D003044 6.2e-13 77.4 35 100.0
BcaC02g11836 Brassica carinata HOM05D000675 ORTHO05D003044 8.1e-13 77.0 55 61.8
C04p10850 Brassica napus HOM05D000675 ORTHO05D020104 8.1e-13 77.0 55 61.8
BcaC08g43027 Brassica carinata HOM05D000675 ORTHO05D003044 1.4e-12 76.3 55 60.0
BcaB07g33977 Brassica carinata HOM05D000675 ORTHO05D003044 4.0e-12 74.7 52 63.5
BcaB07g32139 Brassica carinata HOM05D000675 ORTHO05D000395 5.3e-12 74.3 52 61.5
C04p39650 Brassica napus HOM05D000675 ORTHO05D003044 5.3e-12 74.3 52 57.7
BolC4t25506H Brassica oleracea HOM05D000675 ORTHO05D003044 5.3e-12 74.3 52 57.7
C04p39430 Brassica napus HOM05D000675 ORTHO05D003044 6.9e-12 73.9 52 57.7
BolC4t25508H Brassica oleracea HOM05D000675 ORTHO05D003044 6.9e-12 73.9 52 57.7
BolC4t25532H Brassica oleracea HOM05D000675 ORTHO05D003044 6.9e-12 73.9 52 57.7
BcaB01g01312 Brassica carinata HOM05D000675 ORTHO05D003044 9.0e-12 73.6 54 57.4
A01p22900 Brassica napus HOM05D000675 ORTHO05D003044 1.2e-11 73.2 55 60.0
BraA01t02203Z Brassica rapa HOM05D000675 ORTHO05D003044 1.2e-11 73.2 55 60.0
SpUn0365_0010 Schrenkiella parvula HOM05D011363 ORTHO05D003044 1.2e-11 73.2 54 59.3
A10p13650 Brassica napus HOM05D000675 ORTHO05D000395 1.5e-11 72.8 52 57.7
BraA01t02215Z Brassica rapa HOM05D000675 ORTHO05D003044 1.5e-11 72.8 39 79.5
A01p24790 Brassica napus HOM05D000675 ORTHO05D011634 2.0e-11 72.4 52 61.5
C04p39400 Brassica napus HOM05D000675 ORTHO05D003044 2.0e-11 72.4 52 55.8
BolC6t35505H Brassica oleracea HOM05D000675 ORTHO05D000395 2.6e-11 72.0 52 57.7
C07p21220 Brassica napus HOM05D000675 ORTHO05D003044 3.4e-11 71.6 52 61.5
C09p12130 Brassica napus HOM05D000675 ORTHO05D003044 3.4e-11 71.6 52 61.5
BolC8t48131H Brassica oleracea HOM05D000675 ORTHO05D003044 3.4e-11 71.6 55 58.2
BraA02t07854Z Brassica rapa HOM05D000675 ORTHO05D003044 5.8e-11 70.9 55 58.2
C05p25450 Brassica napus HOM05D000675 ORTHO05D003044 7.6e-11 70.5 52 59.6
C03p68420 Brassica napus HOM05D000675 ORTHO05D003044 9.9e-11 70.1 52 55.8
C05p51310 Brassica napus HOM05D000675 ORTHO05D003044 9.9e-11 70.1 55 50.9
BcaC03g17530 Brassica carinata HOM05D000675 ORTHO05D003044 1.3e-10 69.7 57 52.6
BcaC01g03691 Brassica carinata HOM05D000675 ORTHO05D000395 1.7e-10 69.3 52 55.8
BcaC04g18662 Brassica carinata HOM05D000675 ORTHO05D000395 1.7e-10 69.3 52 57.7
BcaNung03743 Brassica carinata HOM05D000675 ORTHO05D000395 1.7e-10 69.3 52 55.8
A07p03350 Brassica napus HOM05D000675 ORTHO05D003044 1.7e-10 69.3 52 55.8
A09p51430 Brassica napus HOM05D000675 ORTHO05D003044 1.7e-10 69.3 52 55.8
A10p11800 Brassica napus HOM05D000675 ORTHO05D003044 1.7e-10 69.3 52 55.8
C03p49520 Brassica napus HOM05D000675 ORTHO05D003044 1.7e-10 69.3 52 55.8
C09p40920 Brassica napus HOM05D000675 ORTHO05D003044 1.7e-10 69.3 52 55.8
BolC9t56973H Brassica oleracea HOM05D000675 ORTHO05D003044 1.7e-10 69.3 52 55.8
BraA05t20771Z Brassica rapa HOM05D000675 ORTHO05D003044 1.7e-10 69.3 52 55.8
BraA10t43278Z Brassica rapa HOM05D000675 ORTHO05D000395 1.7e-10 69.3 52 55.8
Sp6g09660 Schrenkiella parvula HOM05D000675 ORTHO05D000378 1.7e-10 69.3 59 45.8
BcaB01g01752 Brassica carinata HOM05D000675 ORTHO05D003044 2.2e-10 68.9 55 56.4
BcaB05g22367 Brassica carinata HOM05D000675 ORTHO05D000395 2.2e-10 68.9 50 60.0
BcaC05g26494 Brassica carinata HOM05D000675 ORTHO05D000395 2.2e-10 68.9 51 58.8
Sp1g33290 Schrenkiella parvula HOM05D000675 ORTHO05D014679 2.2e-10 68.9 66 45.5
BcaC02g12835 Brassica carinata HOM05D000675 ORTHO05D000395 2.9e-10 68.6 57 50.9
A02p36630 Brassica napus HOM05D000675 ORTHO05D003044 2.9e-10 68.6 52 55.8
C04p39370 Brassica napus HOM05D000675 ORTHO05D000395 2.9e-10 68.6 57 50.9
BolC4t25484H Brassica oleracea HOM05D000675 ORTHO05D003044 2.9e-10 68.6 66 47.0
BolC4t25504H Brassica oleracea HOM05D000675 ORTHO05D000395 2.9e-10 68.6 57 50.9
BraA02t08658Z Brassica rapa HOM05D000675 ORTHO05D003044 2.9e-10 68.6 52 55.8
BcaC01g05607 Brassica carinata HOM05D000675 ORTHO05D000395 3.8e-10 68.2 52 51.9
C02p54980 Brassica napus HOM05D000675 ORTHO05D003044 3.8e-10 68.2 66 47.0
BolC3t14837H Brassica oleracea HOM05D000675 ORTHO05D000395 3.8e-10 68.2 52 51.9
BcaB01g03782 Brassica carinata HOM05D000675 ORTHO05D003044 4.9e-10 67.8 82 46.3
BcaB05g24643 Brassica carinata HOM05D000675 ORTHO05D000395 8.4e-10 67.0 52 55.8
BcaC09g49264 Brassica carinata HOM05D000675 ORTHO05D000395 8.4e-10 67.0 52 53.8
C03p78170 Brassica napus HOM05D000675 ORTHO05D003044 8.4e-10 67.0 52 51.9
BcaB06g26589 Brassica carinata HOM05D000675 ORTHO05D000395 1.1e-09 66.6 49 57.1
A04p09980 Brassica napus HOM05D000675 ORTHO05D021717 1.1e-09 66.6 51 51.0
BraA04t16659Z Brassica rapa HOM05D000675 ORTHO05D021717 1.1e-09 66.6 51 51.0
BraA08t32813Z Brassica rapa HOM05D000675 ORTHO05D003044 1.1e-09 66.6 49 55.1
BcaB03g15207 Brassica carinata HOM05D000675 ORTHO05D000395 1.9e-09 65.9 58 50.0
BolC5t30502H Brassica oleracea HOM05D000675 ORTHO05D003044 1.9e-09 65.9 52 55.8
BcaB01g01025 Brassica carinata HOM05D000675 ORTHO05D000395 2.4e-09 65.5 52 51.9
BcaB01g03290 Brassica carinata HOM05D000675 ORTHO05D003044 2.4e-09 65.5 52 51.9
BcaNung03607 Brassica carinata HOM05D000675 ORTHO05D000395 3.2e-09 65.1 52 53.8
A01p19480 Brassica napus HOM05D000675 ORTHO05D003044 3.2e-09 65.1 52 53.8
C06p36630 Brassica napus HOM05D000675 ORTHO05D003044 3.2e-09 65.1 52 53.8
BcaB07g31602 Brassica carinata HOM05D000675 ORTHO05D000395 4.2e-09 64.7 44 61.4
BcaC09g51286 Brassica carinata HOM05D000675 ORTHO05D000395 4.2e-09 64.7 50 52.0
Sp2g08210 Schrenkiella parvula HOM05D000675 ORTHO05D014679 4.2e-09 64.7 57 47.4
BcaB06g27534 Brassica carinata HOM05D000675 ORTHO05D000395 5.4e-09 64.3 50 54.0
BcaC03g14557 Brassica carinata HOM05D000675 ORTHO05D000395 5.4e-09 64.3 52 55.8
C09p22720 Brassica napus HOM05D000675 ORTHO05D003044 5.4e-09 64.3 52 55.8
BolC9t55189H Brassica oleracea HOM05D000675 ORTHO05D003044 5.4e-09 64.3 52 55.8
BcaB05g24177 Brassica carinata HOM05D000675 ORTHO05D000395 9.3e-09 63.5 49 57.1
CARHR119980 Cardamine hirsuta HOM05D000675 ORTHO05D003044 9.3e-09 63.5 53 47.2
BcaC02g11195 Brassica carinata HOM05D000675 ORTHO05D000395 1.2e-08 63.2 57 47.4
C04p19390 Brassica napus HOM05D000675 ORTHO05D003044 1.2e-08 63.2 57 47.4
C04p22740 Brassica napus HOM05D000675 ORTHO05D003044 1.2e-08 63.2 47 57.4
C08p03650 Brassica napus HOM05D000675 ORTHO05D003044 1.2e-08 63.2 51 51.0
BolC4t23472H Brassica oleracea HOM05D000675 ORTHO05D003044 1.2e-08 63.2 57 47.4
BcaB07g31727 Brassica carinata HOM05D000675 ORTHO05D000395 1.6e-08 62.8 51 51.0
BraA02t08415Z Brassica rapa HOM05D000675 ORTHO05D003044 2.7e-08 62.0 44 59.1
BcaC01g01731 Brassica carinata HOM05D000675 ORTHO05D003044 3.5e-08 61.6 84 40.5
BcaC02g10278 Brassica carinata HOM05D000675 ORTHO05D000395 1.0e-07 60.1 52 51.9
BcaC05g25609 Brassica carinata HOM05D000675 ORTHO05D021717 1.3e-07 59.7 51 47.1
Carub.0004s0647 Capsella rubella HOM05D000675 ORTHO05D000395 1.3e-07 59.7 55 49.1
Carub.0029s0001 Capsella rubella HOM05D000675 ORTHO05D000395 1.7e-07 59.3 51 49.0
BcaC01g00314 Brassica carinata HOM05D000675 ORTHO05D000395 2.3e-07 58.9 45 48.9
BolC6t35993H Brassica oleracea HOM05D000675 ORTHO05D003044 2.3e-07 58.9 49 51.0
BcaB03g16160 Brassica carinata HOM05D002776 ORTHO05D003044 3.9e-07 58.2 55 45.5
BcaC02g07514 Brassica carinata HOM05D000675 ORTHO05D000395 3.9e-07 58.2 52 50.0
C07p05490 Brassica napus HOM05D000675 ORTHO05D003044 5.1e-07 57.8 52 50.0
BolC7t40949H Brassica oleracea HOM05D000675 ORTHO05D003044 5.1e-07 57.8 52 48.1
Carub.0006s2657 Capsella rubella HOM05D000675 ORTHO05D000395 6.6e-07 57.4 77 41.6
BcaC09g50794 Brassica carinata HOM05D000675 ORTHO05D013510 1.1e-06 56.6 51 49.0
BraA03t14507Z Brassica rapa HOM05D002776 ORTHO05D003044 1.1e-06 56.6 56 42.9
A09p33400 Brassica napus HOM05D002776 ORTHO05D003044 1.9e-06 55.8 56 42.9
BraA09t38883Z Brassica rapa HOM05D002776 ORTHO05D003044 1.9e-06 55.8 56 42.9
A03p54420 Brassica napus HOM05D002776 ORTHO05D003044 2.5e-06 55.5 56 41.1
A03p65940 Brassica napus HOM05D002776 ORTHO05D003044 2.5e-06 55.5 56 41.1
A05p28380 Brassica napus HOM05D002776 ORTHO05D003044 2.5e-06 55.5 56 41.1
BraA09t40149Z Brassica rapa HOM05D002776 ORTHO05D003044 2.5e-06 55.5 56 41.1
BraA08t32833Z Brassica rapa HOM05D002776 ORTHO05D003044 3.3e-06 55.1 56 41.1
Carub.0001s3338 Capsella rubella HOM05D000675 ORTHO05D000395 3.3e-06 55.1 63 46.0
BcaB03g16529 Brassica carinata HOM05D000675 ORTHO05D003044 4.3e-06 54.7 44 50.0
BcaB01g01631 Brassica carinata HOM05D002776 ORTHO05D003044 5.6e-06 54.3 56 41.1
BcaB04g16995 Brassica carinata HOM05D000675 ORTHO05D003044 5.6e-06 54.3 37 59.5
BcaC01g02115 Brassica carinata HOM05D000675 ORTHO05D003044 5.6e-06 54.3 42 52.4
C05p44740 Brassica napus HOM05D002776 ORTHO05D003044 5.6e-06 54.3 56 41.1
Carub.0001s3343 Capsella rubella HOM05D000675 ORTHO05D000395 5.6e-06 54.3 65 46.2
BcaB01g01307 Brassica carinata HOM05D002776 ORTHO05D003044 7.3e-06 53.9 56 41.1
BcaC06g36448 Brassica carinata HOM05D002776 ORTHO05D003044 7.3e-06 53.9 56 41.1
BcaC09g48965 Brassica carinata HOM05D002776 ORTHO05D003044 7.3e-06 53.9 56 41.1
C02p53520 Brassica napus HOM05D002776 ORTHO05D003044 7.3e-06 53.9 56 41.1
C03p65980 Brassica napus HOM05D002776 ORTHO05D003044 7.3e-06 53.9 56 41.1
C04p41840 Brassica napus HOM05D002776 ORTHO05D003044 7.3e-06 53.9 56 41.1
C09p19460 Brassica napus HOM05D002776 ORTHO05D003044 7.3e-06 53.9 56 41.1
Carub.0009s0004 Capsella rubella HOM05D000675 ORTHO05D000395 7.3e-06 53.9 63 46.0
BcaB04g17677 Brassica carinata HOM05D002776 ORTHO05D003044 9.6e-06 53.5 56 41.1
A10p06820 Brassica napus HOM05D002776 ORTHO05D003044 9.6e-06 53.5 56 39.3
C01p38740 Brassica napus HOM05D002776 ORTHO05D003044 9.6e-06 53.5 55 45.5
C07p13920 Brassica napus HOM05D002776 ORTHO05D003044 9.6e-06 53.5 55 45.5


User provided reference genes

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