Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g21009 Brassica carinata HOM05D008266 ORTHO05D009904 1.3e-54 216.1 101 100.0
BcaC03g18089 Brassica carinata HOM05D008266 ORTHO05D000062 3.1e-21 105.1 56 80.4
BcaC06g34574 Brassica carinata HOM05D008266 ORTHO05D000062 4.1e-21 104.8 56 78.6
BcaB02g11280 Brassica carinata HOM05D008266 ORTHO05D000062 1.7e-19 99.4 65 63.1
BcaB01g02847 Brassica carinata HOM05D008266 ORTHO05D000062 5.0e-19 97.8 57 77.2
BcaB02g10137 Brassica carinata HOM05D008266 ORTHO05D000062 1.4e-13 79.7 57 57.9
BcaC05g26938 Brassica carinata HOM05D008266 ORTHO05D009904 3.1e-13 78.6 57 56.1
BcaC01g03173 Brassica carinata HOM05D008266 ORTHO05D000062 3.5e-12 75.1 57 54.4
BcaC08g44331 Brassica carinata HOM05D008266 ORTHO05D000062 2.9e-11 72.0 57 52.6
BcaB04g17841 Brassica carinata HOM05D008266 ORTHO05D000062 5.0e-11 71.2 51 54.9
BcaC08g44714 Brassica carinata HOM05D008266 ORTHO05D021591 5.0e-11 71.2 40 82.5
BcaB06g26682 Brassica carinata HOM05D008266 ORTHO05D000062 6.5e-11 70.9 51 51.0
BcaB02g11130 Brassica carinata HOM05D008266 ORTHO05D000062 5.5e-10 67.8 47 51.1
TWI53G0600 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 9.4e-10 67.0 57 52.6
TWI56G1165 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 4.7e-09 64.7 57 50.9
BcaB03g16140 Brassica carinata HOM05D008266 ORTHO05D000062 6.1e-09 64.3 50 52.0
SHI19809 Sapria himalayana HOM05D000107 ORTHO05D000062 6.1e-09 64.3 60 45.0
Aa31LG2G17950 Aethionema arabicum HOM05D001086 ORTHO05D001112 8.0e-09 63.9 82 34.1
TWI81G0027 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 8.0e-09 63.9 52 51.9
Aa31sc465G10 Aethionema arabicum HOM05D001086 ORTHO05D009904 1.4e-08 63.2 72 37.5
BcaC03g17092 Brassica carinata HOM05D008266 ORTHO05D000062 1.4e-08 63.2 56 46.4
BcaNung02471 Brassica carinata HOM05D008266 ORTHO05D000062 1.4e-08 63.2 50 50.0
SHI37531 Sapria himalayana HOM05D000107 ORTHO05D000062 1.4e-08 63.2 67 46.3
THA.LOC104810640 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 1.4e-08 63.2 50 50.0
THA.LOC104815415 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 1.4e-08 63.2 50 50.0
THA.LOC104816687 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 1.4e-08 63.2 50 50.0
TPR.G39680 Trifolium pratense HOM05D000107 ORTHO05D000062 1.4e-08 63.2 58 39.7
TWI81G0480 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.4e-08 63.2 52 53.8
SHI36114 Sapria himalayana HOM05D000107 ORTHO05D000062 1.8e-08 62.8 67 46.3
SHI42354 Sapria himalayana HOM05D000107 ORTHO05D000062 1.8e-08 62.8 67 44.8
Aa31sc75G50 Aethionema arabicum HOM05D000107 ORTHO05D000062 2.3e-08 62.4 56 41.1
TWI73G0119 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 2.3e-08 62.4 58 46.6
Aa31sc555G60 Aethionema arabicum HOM05D001086 ORTHO05D009904 3.0e-08 62.0 72 36.1
Aa31sc688G10 Aethionema arabicum HOM05D001086 ORTHO05D009904 3.0e-08 62.0 72 36.1
THA.LOC104798989 Tarenaya hassleriana HOM05D008266 ORTHO05D000062 3.0e-08 62.0 57 43.9
THA.LOC104810147 Tarenaya hassleriana HOM05D008266 ORTHO05D000062 3.0e-08 62.0 50 52.0
BcaC06g36414 Brassica carinata HOM05D008266 ORTHO05D000062 4.0e-08 61.6 50 48.0
TWI32G1089 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 4.0e-08 61.6 52 50.0
TWI60G0864 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 4.0e-08 61.6 58 44.8
Aa31sc106G50 Aethionema arabicum HOM05D000107 ORTHO05D000062 5.2e-08 61.2 72 36.1
BcaC08g47042 Brassica carinata HOM05D008266 ORTHO05D000062 6.7e-08 60.8 50 48.0
Manes.10G068101 Manihot esculenta HOM05D000107 ORTHO05D000062 6.7e-08 60.8 52 46.2
Manes.17G119950 Manihot esculenta HOM05D000107 ORTHO05D000062 6.7e-08 60.8 52 44.2
Sp7g07620 Schrenkiella parvula HOM05D008266 ORTHO05D009904 6.7e-08 60.8 47 53.2
TWI59G1045 Tripterygium wilfordii HOM05D008266 ORTHO05D000062 6.7e-08 60.8 52 50.0
BcaC03g17259 Brassica carinata HOM05D008266 ORTHO05D000062 8.8e-08 60.5 71 38.0
BcaC09g49251 Brassica carinata HOM05D001086 ORTHO05D009904 8.8e-08 60.5 57 42.1
THA.LOC104825104 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 8.8e-08 60.5 57 42.1
TWI38G0895 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 8.8e-08 60.5 52 50.0
BcaB01g00797 Brassica carinata HOM05D008266 ORTHO05D000062 1.1e-07 60.1 47 48.9
PGSC0003DMG400014039 Solanum tuberosum HOM05D010076 ORTHO05D012500 1.1e-07 60.1 46 58.7
Aa31sc639G60 Aethionema arabicum HOM05D001086 ORTHO05D009904 2.0e-07 59.3 57 40.4
BcaC01g02221 Brassica carinata HOM05D008266 ORTHO05D009904 2.0e-07 59.3 80 37.5
ECA246G4894 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.0e-07 59.3 53 43.4
TWI18G0474 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 2.0e-07 59.3 58 48.3
BcaB07g32592 Brassica carinata HOM05D008266 ORTHO05D000062 2.6e-07 58.9 56 44.6
TPR.G11453 Trifolium pratense HOM05D000107 ORTHO05D000062 2.6e-07 58.9 52 51.9
Aa31sc21G160 Aethionema arabicum HOM05D001086 ORTHO05D009904 3.3e-07 58.5 72 36.1
BcaC07g41630 Brassica carinata HOM05D008266 ORTHO05D000062 3.3e-07 58.5 47 48.9
ECA234G0534 Erigeron canadensis HOM05D000107 ORTHO05D000062 3.3e-07 58.5 49 49.0
Solyc10g049777.1 Solanum lycopersicum HOM05D010076 ORTHO05D012500 3.3e-07 58.5 69 42.0
TPR.G12582 Trifolium pratense HOM05D000107 ORTHO05D000062 3.3e-07 58.5 52 46.2
Aa31sc259G20 Aethionema arabicum HOM05D001086 ORTHO05D009904 4.4e-07 58.2 61 39.3
Sp7g06740 Schrenkiella parvula HOM05D007948 ORTHO05D006374 4.4e-07 58.2 47 51.1
THA.LOC104810224 Tarenaya hassleriana HOM05D008266 ORTHO05D000062 5.7e-07 57.8 50 50.0
Aa31LG1G5710 Aethionema arabicum HOM05D001086 ORTHO05D009904 7.5e-07 57.4 72 34.7
Aa31sc598G30 Aethionema arabicum HOM05D001086 ORTHO05D009904 7.5e-07 57.4 63 36.5
BcaB07g30750 Brassica carinata HOM05D008266 ORTHO05D000062 7.5e-07 57.4 47 48.9
BcaC04g18851 Brassica carinata HOM05D008266 ORTHO05D000062 7.5e-07 57.4 47 48.9
SHI22906 Sapria himalayana HOM05D000107 ORTHO05D000062 9.7e-07 57.0 64 40.6
BcaC02g08637 Brassica carinata HOM05D001086 ORTHO05D009904 1.3e-06 56.6 50 44.0
Manes.04G058760 Manihot esculenta HOM05D000107 ORTHO05D000062 1.3e-06 56.6 67 40.3
Manes.15G191830 Manihot esculenta HOM05D000107 ORTHO05D000062 1.3e-06 56.6 67 40.3
SHI17352 Sapria himalayana HOM05D000107 ORTHO05D000062 1.3e-06 56.6 52 48.1
SpUn0001_0660 Schrenkiella parvula HOM05D007948 ORTHO05D006374 1.3e-06 56.6 47 48.9
TPR.G36007 Trifolium pratense HOM05D000107 ORTHO05D000062 1.3e-06 56.6 63 44.4
BcaC01g03082 Brassica carinata HOM05D008266 ORTHO05D009904 1.7e-06 56.2 47 46.8
SHI06290 Sapria himalayana HOM05D000648 ORTHO05D000062 1.7e-06 56.2 49 51.0
Aa31sc237G10 Aethionema arabicum HOM05D001086 ORTHO05D009904 2.8e-06 55.5 51 39.2
BcaC02g08322 Brassica carinata HOM05D001086 ORTHO05D009904 2.8e-06 55.5 50 44.0
BcaC08g44727 Brassica carinata HOM05D008266 ORTHO05D000062 2.8e-06 55.5 47 46.8
SHI31600 Sapria himalayana HOM05D000107 ORTHO05D000062 2.8e-06 55.5 60 41.7
Aa31LG8G12280 Aethionema arabicum HOM05D001086 ORTHO05D009904 4.8e-06 54.7 52 38.5
Aa31sc99G100 Aethionema arabicum HOM05D001086 ORTHO05D009904 4.8e-06 54.7 65 40.0
BolC4t22507H Brassica oleracea HOM05D001086 ORTHO05D009904 4.8e-06 54.7 46 47.8
COL.COLO4_36518 Corchorus olitorius HOM05D008266 ORTHO05D000062 4.8e-06 54.7 58 43.1
Manes.16G074801 Manihot esculenta HOM05D000107 ORTHO05D000062 4.8e-06 54.7 67 37.3
Hund30795 Selenicereus undatus HOM05D001220 ORTHO05D000110 4.8e-06 54.7 42 57.1
Aa31LG7G11710 Aethionema arabicum HOM05D001086 ORTHO05D009904 8.2e-06 53.9 57 36.8
SHI38043 Sapria himalayana HOM05D000107 ORTHO05D000062 8.2e-06 53.9 67 35.8
Sp1g31350 Schrenkiella parvula HOM05D008266 ORTHO05D000062 8.2e-06 53.9 47 44.7


User provided reference genes

Program Settings