Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g20966 Brassica carinata HOM05D006121 ORTHO05D009559 1.2e-210 736.5 441 100.0
BcaC08g45230 Brassica carinata HOM05D006121 ORTHO05D002427 1.1e-33 148.7 165 53.9
BcaC06g35787 Brassica carinata HOM05D006121 ORTHO05D009559 1.0e-31 142.1 95 83.2
BcaC06g36507 Brassica carinata HOM05D006121 ORTHO05D009559 2.7e-29 134.0 366 36.6
BcaC04g20594 Brassica carinata HOM05D006121 ORTHO05D009559 7.5e-27 125.9 145 53.1
BcaC07g37903 Brassica carinata HOM05D006121 ORTHO05D009559 9.7e-27 125.6 163 53.4
BcaC05g27709 Brassica carinata HOM05D006121 ORTHO05D093169 1.1e-25 122.1 87 75.9
BcaC06g35988 Brassica carinata HOM05D006121 ORTHO05D009559 2.0e-24 117.9 342 32.5
BcaC05g27433 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-23 115.2 369 33.1
BcaC05g27828 Brassica carinata HOM05D006121 ORTHO05D009559 2.2e-23 114.4 131 51.9
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 1.0e-20 105.5 61 88.5
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 1.4e-20 105.1 61 86.9
BcaC03g15146 Brassica carinata HOM05D004128 ORTHO05D008395 1.8e-20 104.8 61 88.5
BolC2t08771H Brassica oleracea HOM05D004128 ORTHO05D017536 1.8e-20 104.8 61 88.5
BcaC07g37515 Brassica carinata HOM05D004128 ORTHO05D008395 4.0e-20 103.6 61 86.9
BcaC02g10649 Brassica carinata HOM05D004128 ORTHO05D017536 4.4e-19 100.1 60 86.7
C04p26210 Brassica napus HOM05D004128 ORTHO05D017536 4.4e-19 100.1 60 86.7
BolC4t24185H Brassica oleracea HOM05D004128 ORTHO05D017536 4.4e-19 100.1 60 86.7
BcaC08g44795 Brassica carinata HOM05D006121 ORTHO05D027423 8.3e-18 95.9 101 58.4
BcaC06g33796 Brassica carinata HOM05D000529 ORTHO05D014935 2.4e-17 94.4 108 55.6
BcaC03g17371 Brassica carinata HOM05D006121 ORTHO05D009559 2.0e-16 91.3 266 34.6
BcaB05g23656 Brassica carinata HOM05D004128 ORTHO05D008395 2.7e-13 80.9 73 63.0
BraA08t33243Z Brassica rapa HOM05D004128 ORTHO05D017536 6.1e-13 79.7 60 76.7
BcaB01g01207 Brassica carinata HOM05D004128 ORTHO05D017536 4.0e-12 77.0 73 61.6
BcaB02g11375 Brassica carinata HOM05D007203 ORTHO05D011558 3.4e-11 73.9 51 72.5
BcaC09g49541 Brassica carinata HOM05D006121 ORTHO05D009559 2.8e-10 70.9 40 90.0
BcaC06g34988 Brassica carinata HOM05D006121 ORTHO05D009559 1.8e-09 68.2 39 87.2
BraA09t38607Z Brassica rapa HOM05D006121 ORTHO05D009559 4.5e-08 63.5 187 33.7
BolC4t25316H Brassica oleracea HOM05D037508 ORTHO05D031939 5.9e-08 63.2 45 64.4
BcaC01g02238 Brassica carinata HOM05D006121 ORTHO05D009559 2.3e-07 61.2 200 33.5
BcaC02g09707 Brassica carinata HOM05D037508 ORTHO05D031939 2.9e-07 60.8 42 66.7
BcaC04g20762 Brassica carinata HOM05D006121 ORTHO05D009559 3.8e-07 60.5 155 35.5
BcaC04g23210 Brassica carinata HOM05D006121 ORTHO05D009559 3.8e-07 60.5 156 34.6
BcaC09g51377 Brassica carinata HOM05D006121 ORTHO05D009559 6.6e-07 59.7 39 76.9
C04p37490 Brassica napus HOM05D037508 ORTHO05D031939 6.6e-07 59.7 42 66.7
BcaC03g16371 Brassica carinata HOM05D006121 ORTHO05D009559 8.6e-07 59.3 40 75.0
BcaB05g23062 Brassica carinata HOM05D004128 ORTHO05D092751 1.1e-06 58.9 44 70.5
BcaC04g23066 Brassica carinata HOM05D006121 ORTHO05D009559 3.3e-06 57.4 40 72.5
A01p28280 Brassica napus HOM05D004128 ORTHO05D017536 5.6e-06 56.6 60 60.0
A03p58160 Brassica napus HOM05D004128 ORTHO05D008395 5.6e-06 56.6 60 60.0
A07p17750 Brassica napus HOM05D004128 ORTHO05D017536 5.6e-06 56.6 60 60.0
A08p09180 Brassica napus HOM05D004128 ORTHO05D008395 5.6e-06 56.6 60 60.0
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 5.6e-06 56.6 60 60.0
BraA07t29497Z Brassica rapa HOM05D004128 ORTHO05D017536 5.6e-06 56.6 60 60.0
BcaC08g44151 Brassica carinata HOM05D006121 ORTHO05D009559 7.3e-06 56.2 119 34.5
C08p08950 Brassica napus HOM05D039310 ORTHO05D032948 7.3e-06 56.2 79 48.1
BcaC07g37417 Brassica carinata HOM05D039310 ORTHO05D032948 9.5e-06 55.8 79 48.1


User provided reference genes

Program Settings