Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g20891 Brassica carinata HOM05D003835 ORTHO05D004930 5.1e-193 677.6 338 100.0
BcaC04g20623 Brassica carinata HOM05D003835 ORTHO05D004930 2.2e-156 555.8 354 81.9
BcaC04g20991 Brassica carinata HOM05D003835 ORTHO05D004930 8.5e-156 553.9 356 80.6
BcaC04g20843 Brassica carinata HOM05D003835 ORTHO05D004930 2.8e-143 512.3 358 78.2
BcaC04g20985 Brassica carinata HOM05D003835 ORTHO05D004930 3.5e-141 505.4 338 78.4
BcaC04g20857 Brassica carinata HOM05D003835 ORTHO05D004930 5.9e-141 504.6 356 76.4
BcaC02g10813 Brassica carinata HOM05D003835 ORTHO05D004930 2.0e-128 463.0 359 68.5
BolC8t47793H Brassica oleracea HOM05D003835 ORTHO05D004930 1.0e-124 450.7 307 77.2
BcaNung05987 Brassica carinata HOM05D003835 ORTHO05D004930 6.8e-113 411.4 314 71.7
BcaC05g27575 Brassica carinata HOM05D003835 ORTHO05D004930 3.2e-102 375.9 315 66.7
BcaC06g36790 Brassica carinata HOM05D003835 ORTHO05D004930 1.6e-101 373.6 314 67.2
BcaC01g02043 Brassica carinata HOM05D003835 ORTHO05D004930 1.6e-98 363.6 324 61.7
BcaC06g36022 Brassica carinata HOM05D003835 ORTHO05D004930 2.0e-96 356.7 336 61.0
BcaC05g27887 Brassica carinata HOM05D003835 ORTHO05D004930 2.3e-84 316.6 335 56.1
BcaC01g01952 Brassica carinata HOM05D003835 ORTHO05D004930 4.3e-83 312.4 251 62.5
BolC4t24052H Brassica oleracea HOM05D003835 ORTHO05D004930 5.8e-80 302.0 185 80.5
BcaC01g02168 Brassica carinata HOM05D003835 ORTHO05D004930 3.2e-78 296.2 241 67.2
BcaC05g27891 Brassica carinata HOM05D003835 ORTHO05D004930 3.5e-77 292.7 167 85.0
BcaB01g01376 Brassica carinata HOM05D003835 ORTHO05D004930 2.1e-74 283.5 323 51.1
BcaC07g37476 Brassica carinata HOM05D003835 ORTHO05D004930 1.8e-73 280.4 159 86.2
BcaC02g10560 Brassica carinata HOM05D003835 ORTHO05D004930 2.4e-73 280.0 283 54.1
BcaC02g10732 Brassica carinata HOM05D003835 ORTHO05D004930 3.1e-73 279.6 251 61.4
BcaC03g16671 Brassica carinata HOM05D003835 ORTHO05D004930 7.6e-72 275.0 352 48.3
BcaC03g16445 Brassica carinata HOM05D003835 ORTHO05D004930 9.9e-72 274.6 324 51.5
BcaB01g01339 Brassica carinata HOM05D003835 ORTHO05D004930 4.6e-69 265.8 328 49.4
BcaC03g17353 Brassica carinata HOM05D003835 ORTHO05D004930 7.9e-69 265.0 231 60.2
BcaB06g26909 Brassica carinata HOM05D003835 ORTHO05D004930 1.6e-66 257.3 263 55.1
BcaC05g27589 Brassica carinata HOM05D003835 ORTHO05D004930 4.8e-66 255.8 195 64.1
BcaC09g49645 Brassica carinata HOM05D003835 ORTHO05D004930 6.9e-65 251.9 281 55.2
BcaC01g02336 Brassica carinata HOM05D003835 ORTHO05D004930 1.2e-64 251.1 147 83.7
BcaC04g20851 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-64 250.8 189 72.5
BcaC01g02153 Brassica carinata HOM05D003835 ORTHO05D004930 1.0e-63 248.1 261 53.3
BcaC05g27703 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-63 247.3 269 55.8
BcaC07g37247 Brassica carinata HOM05D003835 ORTHO05D004930 6.5e-63 245.4 283 54.8
BcaC02g10604 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-62 244.2 283 55.5
BolC8t47946H Brassica oleracea HOM05D003835 ORTHO05D004930 1.9e-62 243.8 287 52.3
BcaC04g20889 Brassica carinata HOM05D003835 ORTHO05D004930 7.1e-62 241.9 135 85.2
BcaC09g49698 Brassica carinata HOM05D003835 ORTHO05D004930 5.1e-60 235.7 206 58.3
BcaC03g16677 Brassica carinata HOM05D003835 ORTHO05D004930 5.7e-59 232.3 138 81.2
BcaC06g36461 Brassica carinata HOM05D003835 ORTHO05D004930 3.7e-58 229.6 226 54.0
BcaC08g43746 Brassica carinata HOM05D003835 ORTHO05D004930 4.8e-58 229.2 135 81.5
BcaC06g35964 Brassica carinata HOM05D003835 ORTHO05D004930 6.3e-58 228.8 243 53.1
BcaC09g49753 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-57 228.0 135 83.0
BcaB07g33106 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-57 227.6 203 58.6
BcaC03g16196 Brassica carinata HOM05D003835 ORTHO05D004930 5.9e-56 222.2 207 57.0
BcaC05g28695 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-54 217.6 297 45.8
BcaC04g20805 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-51 208.0 114 86.8
BcaC09g49664 Brassica carinata HOM05D003835 ORTHO05D004930 2.8e-50 203.4 114 86.0
BraA05t21182Z Brassica rapa HOM05D003835 ORTHO05D004930 6.9e-49 198.7 280 43.9
BolC2t10319H Brassica oleracea HOM05D003835 ORTHO05D004930 1.0e-47 194.9 98 91.8
BcaC06g36783 Brassica carinata HOM05D003835 ORTHO05D004930 1.3e-47 194.5 108 86.1
BcaC06g35918 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-47 194.1 388 40.2
BcaC09g49552 Brassica carinata HOM05D003835 ORTHO05D004930 2.9e-47 193.4 101 90.1
BcaC03g16533 Brassica carinata HOM05D003835 ORTHO05D004930 3.8e-47 193.0 137 72.3
BolC8t50199H Brassica oleracea HOM05D003835 ORTHO05D004930 9.4e-46 188.3 143 65.0
BcaC02g10387 Brassica carinata HOM05D003835 ORTHO05D004930 3.6e-45 186.4 372 39.2
BolC8t47785H Brassica oleracea HOM05D003835 ORTHO05D004930 4.6e-45 186.0 130 71.5
BcaC07g37248 Brassica carinata HOM05D003835 ORTHO05D004930 7.9e-45 185.3 97 90.7
BcaC06g35829 Brassica carinata HOM05D003835 ORTHO05D004930 3.9e-44 183.0 280 44.3
BcaC07g37471 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-43 181.0 119 73.1
BcaC07g39533 Brassica carinata HOM05D003835 ORTHO05D004930 8.2e-42 175.3 142 62.0
BcaC06g35990 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-41 174.9 104 81.7
BcaC02g10605 Brassica carinata HOM05D003835 ORTHO05D004930 2.6e-40 170.2 94 85.1
BcaC01g02120 Brassica carinata HOM05D003835 ORTHO05D004930 8.5e-39 165.2 138 63.0
BcaC03g16471 Brassica carinata HOM05D003835 ORTHO05D004930 1.9e-38 164.1 108 74.1
BcaB01g01286 Brassica carinata HOM05D003835 ORTHO05D004930 2.5e-38 163.7 155 60.0
BcaC01g02227 Brassica carinata HOM05D003835 ORTHO05D004930 1.2e-37 161.4 100 77.0
BcaB05g23456 Brassica carinata HOM05D003835 ORTHO05D004930 1.6e-37 161.0 140 59.3
BcaB05g23025 Brassica carinata HOM05D003835 ORTHO05D004930 2.3e-36 157.1 133 57.9
BraA01t02821Z Brassica rapa HOM05D003835 ORTHO05D004930 2.3e-36 157.1 178 51.1
BcaC04g20888 Brassica carinata HOM05D003835 ORTHO05D004930 3.3e-35 153.3 117 71.8
BcaC01g02195 Brassica carinata HOM05D003835 ORTHO05D004930 2.2e-31 140.6 77 83.1
BcaC07g37593 Brassica carinata HOM05D003835 ORTHO05D004930 2.9e-31 140.2 76 86.8
BcaC09g49627 Brassica carinata HOM05D003835 ORTHO05D004930 5.0e-31 139.4 85 78.8
BcaC04g20842 Brassica carinata HOM05D003835 ORTHO05D004930 5.5e-30 136.0 206 45.6
BcaC05g28698 Brassica carinata HOM05D003835 ORTHO05D004930 5.5e-30 136.0 76 82.9
BcaB01g01100 Brassica carinata HOM05D003835 ORTHO05D004930 1.8e-28 131.0 178 44.9
BcaB05g23138 Brassica carinata HOM05D003835 ORTHO05D004930 2.3e-28 130.6 175 45.7
BraA08t32792Z Brassica rapa HOM05D003835 ORTHO05D004930 3.0e-28 130.2 309 34.0
BcaC05g27823 Brassica carinata HOM05D003835 ORTHO05D004930 2.6e-27 127.1 68 86.8
BolC8t47786H Brassica oleracea HOM05D003835 ORTHO05D014092 3.3e-27 126.7 102 65.7
BcaC02g10775 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-26 124.4 275 36.0
BcaC06g36120 Brassica carinata HOM05D003835 ORTHO05D004930 3.7e-26 123.2 76 80.3
BolC4t24276H Brassica oleracea HOM05D003835 ORTHO05D004930 2.4e-25 120.6 279 33.7
BcaC03g16230 Brassica carinata HOM05D003835 ORTHO05D004930 7.0e-25 119.0 66 84.8
BcaC06g36053 Brassica carinata HOM05D003835 ORTHO05D004930 1.2e-24 118.2 72 76.4
BraA03t15672Z Brassica rapa HOM05D003835 ORTHO05D004930 1.6e-24 117.9 251 33.9
Carub.0008s0643 Capsella rubella HOM05D003835 ORTHO05D004930 3.5e-24 116.7 241 32.4
BcaC03g16557 Brassica carinata HOM05D007458 ORTHO05D009533 4.5e-24 116.3 191 34.6
BcaB06g26790 Brassica carinata HOM05D003835 ORTHO05D004930 1.2e-21 108.2 207 36.2
BcaC09g49670 Brassica carinata HOM05D003835 ORTHO05D004930 3.4e-19 100.1 318 32.7
BcaC05g27890 Brassica carinata HOM05D003835 ORTHO05D004930 9.8e-19 98.6 57 80.7
BcaB08g35159 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-18 97.8 131 37.4
BcaC03g16198 Brassica carinata HOM05D003835 ORTHO05D004930 2.2e-18 97.4 137 39.4
BcaB08g35260 Brassica carinata HOM05D003835 ORTHO05D004930 3.7e-18 96.7 75 65.3
BolC3t19175H Brassica oleracea HOM05D003835 ORTHO05D004930 4.8e-18 96.3 142 37.3
AL4G20670 Arabidopsis lyrata HOM05D003835 ORTHO05D004930 6.3e-18 95.9 237 30.4
BolC2t11376H Brassica oleracea HOM05D003835 ORTHO05D004930 1.1e-17 95.1 188 34.0
BcaC09g48282 Brassica carinata HOM05D003835 ORTHO05D004930 1.8e-17 94.4 61 68.9
BcaC03g16787 Brassica carinata HOM05D003835 ORTHO05D004930 3.1e-17 93.6 83 59.0
BcaB02g11288 Brassica carinata HOM05D003835 ORTHO05D004930 4.1e-17 93.2 80 61.2
BcaC03g16751 Brassica carinata HOM05D003835 ORTHO05D004930 5.4e-17 92.8 138 38.4
BcaC03g16676 Brassica carinata HOM05D003835 ORTHO05D004930 7.0e-17 92.4 83 57.8
BolC3t19072H Brassica oleracea HOM05D003835 ORTHO05D004930 2.0e-16 90.9 52 80.8
BcaC01g02117 Brassica carinata HOM05D003835 ORTHO05D004930 2.7e-16 90.5 81 56.8
BcaC09g48541 Brassica carinata HOM05D003835 ORTHO05D004930 2.7e-16 90.5 135 37.8
BcaB02g11345 Brassica carinata HOM05D003835 ORTHO05D004930 3.5e-16 90.1 137 36.5
BolC6t37236H Brassica oleracea HOM05D003835 ORTHO05D004930 1.7e-15 87.8 45 86.7
BcaC03g16405 Brassica carinata HOM05D003835 ORTHO05D004930 5.0e-15 86.3 94 48.9
BcaC07g37517 Brassica carinata HOM05D003835 ORTHO05D004930 5.0e-15 86.3 62 67.7
BcaC01g02337 Brassica carinata HOM05D003835 ORTHO05D014092 6.5e-15 85.9 60 76.7
BcaC05g28699 Brassica carinata HOM05D007458 ORTHO05D009533 1.1e-14 85.1 148 35.1
BraA05t21344Z Brassica rapa HOM05D003835 ORTHO05D004930 1.1e-14 85.1 47 80.9
C05p36390 Brassica napus HOM05D003835 ORTHO05D014092 2.5e-14 84.0 87 55.2
BolC7t40712H Brassica oleracea HOM05D003835 ORTHO05D004930 4.2e-14 83.2 64 67.2
BcaC08g44357 Brassica carinata HOM05D003835 ORTHO05D004930 7.2e-14 82.4 106 38.7
BcaC03g16553 Brassica carinata HOM05D003835 ORTHO05D004930 9.5e-14 82.0 84 52.4
BcaC04g20902 Brassica carinata HOM05D003835 ORTHO05D004930 9.5e-14 82.0 65 64.6
BcaC03g16228 Brassica carinata HOM05D003835 ORTHO05D004930 1.2e-13 81.6 166 32.5
BcaC05g27888 Brassica carinata HOM05D003835 ORTHO05D004930 2.8e-13 80.5 62 67.7
BraA05t21178Z Brassica rapa HOM05D003835 ORTHO05D004930 2.8e-13 80.5 267 27.7
CANSAT35G0823 Cannabis sativa HOM05D014149 ORTHO05D004930 2.8e-13 80.5 181 33.7
CANSAT54G2560 Cannabis sativa HOM05D012521 ORTHO05D011451 2.8e-13 80.5 188 31.9
BcaC06g35162 Brassica carinata HOM05D003835 ORTHO05D004930 1.0e-12 78.6 106 38.7
BraA09t38710Z Brassica rapa HOM05D003835 ORTHO05D019916 1.4e-12 78.2 167 32.3
CANSAT25G0896 Cannabis sativa HOM05D012521 ORTHO05D011451 1.4e-12 78.2 188 31.4
CANSAT35G1012 Cannabis sativa HOM05D027150 ORTHO05D028423 5.2e-12 76.3 106 38.7
BcaC05g28049 Brassica carinata HOM05D003835 ORTHO05D004930 8.9e-12 75.5 112 38.4
BolC5t32809H Brassica oleracea HOM05D007458 ORTHO05D009533 8.9e-12 75.5 120 37.5
BcaC03g14834 Brassica carinata HOM05D003835 ORTHO05D004930 1.2e-11 75.1 106 36.8
BcaB08g35438 Brassica carinata HOM05D003835 ORTHO05D004930 2.6e-11 73.9 75 48.0
A04p11820 Brassica napus HOM05D003835 ORTHO05D004930 2.2e-10 70.9 142 31.0
BcaC04g20890 Brassica carinata HOM05D003835 ORTHO05D014092 4.9e-10 69.7 151 35.8
BcaC09g49877 Brassica carinata HOM05D003835 ORTHO05D004930 1.8e-09 67.8 156 31.4
BraA08t32793Z Brassica rapa HOM05D007458 ORTHO05D009533 3.1e-09 67.0 87 37.9
BcaB03g16388 Brassica carinata HOM05D003835 ORTHO05D004930 5.4e-09 66.2 160 32.5
BcaB04g18230 Brassica carinata HOM05D003835 ORTHO05D004930 5.4e-09 66.2 85 40.0
CANSAT01G2276 Cannabis sativa HOM05D014149 ORTHO05D011451 7.0e-09 65.9 144 33.3
BcaC09g50045 Brassica carinata HOM05D003835 ORTHO05D004930 9.2e-09 65.5 99 37.4
CANSAT54G1078 Cannabis sativa HOM05D012521 ORTHO05D011451 9.2e-09 65.5 207 29.5
TWI36G1199 Tripterygium wilfordii HOM05D012521 ORTHO05D000116 1.6e-08 64.7 169 25.4
Oeu002338.1 Olea europaea HOM05D011150 ORTHO05D011451 2.0e-08 64.3 108 36.1
TWI59G0099 Tripterygium wilfordii HOM05D011150 ORTHO05D011451 2.0e-08 64.3 169 25.4
BraA05t21049Z Brassica rapa HOM05D003835 ORTHO05D014092 2.7e-08 63.9 60 58.3
BcaC06g35919 Brassica carinata HOM05D003835 ORTHO05D004930 4.5e-08 63.2 88 40.9
SalBow8G4289 Salvia bowleyana HOM05D010617 ORTHO05D011805 4.5e-08 63.2 167 31.7
BcaB06g26993 Brassica carinata HOM05D007458 ORTHO05D009533 1.3e-07 61.6 218 28.0
SalBow5G3953 Salvia bowleyana HOM05D010617 ORTHO05D011805 1.3e-07 61.6 110 31.8
SalBow5G1224 Salvia bowleyana HOM05D010617 ORTHO05D011805 1.7e-07 61.2 113 32.7
SalBow5G2537 Salvia bowleyana HOM05D010617 ORTHO05D011805 1.7e-07 61.2 113 32.7
SalBow5G4492 Salvia bowleyana HOM05D010617 ORTHO05D011805 2.3e-07 60.8 109 32.1
Oeu023903.1 Olea europaea HOM05D011150 ORTHO05D011451 3.8e-07 60.1 150 31.3
Oeu014361.1 Olea europaea HOM05D011150 ORTHO05D011451 5.0e-07 59.7 199 26.6
BcaC07g37516 Brassica carinata HOM05D003835 ORTHO05D004930 6.6e-07 59.3 45 66.7
BcaC01g02049 Brassica carinata HOM05D003835 ORTHO05D004930 8.6e-07 58.9 127 32.3
BcaB03g16212 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-06 58.2 134 32.8
CANSAT64G0037 Cannabis sativa HOM05D014149 ORTHO05D011451 1.9e-06 57.8 121 35.5
Carub.0005s0956 Capsella rubella HOM05D009492 ORTHO05D011693 2.5e-06 57.4 151 30.5
TWI36G1308 Tripterygium wilfordii HOM05D015010 ORTHO05D019384 2.5e-06 57.4 107 29.9
BcaC04g20885 Brassica carinata HOM05D003835 ORTHO05D004930 3.3e-06 57.0 66 43.9
Thhalv10002744m.g Eutrema salsugineum HOM05D003835 ORTHO05D004930 4.3e-06 56.6 71 40.8
BraA06t25395Z Brassica rapa HOM05D003835 ORTHO05D004930 5.6e-06 56.2 75 44.0
Carub.0007s3611 Capsella rubella HOM05D009492 ORTHO05D011693 7.3e-06 55.8 151 29.8


User provided reference genes

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