Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g20809 Brassica carinata HOM05D000313 ORTHO05D032045 6.0e-92 340.9 179 100.0
C09p38910 Brassica napus HOM05D000313 ORTHO05D032045 1.3e-59 233.4 263 55.9
BolC9t56761H Brassica oleracea HOM05D000313 ORTHO05D032045 1.3e-59 233.4 263 55.9
A02p25960 Brassica napus HOM05D000313 ORTHO05D000065 7.9e-36 154.5 200 51.0
BolC3t20344H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-20 104.0 154 44.8
BraA03t15605Z Brassica rapa HOM05D000313 ORTHO05D000065 1.2e-20 104.0 156 41.7
C01p51210 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-19 100.1 203 35.5
C02p57090 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-19 99.8 170 40.6
BolC3t17179H Brassica oleracea HOM05D000313 ORTHO05D000065 4.0e-19 99.0 209 34.9
BolC2t12325H Brassica oleracea HOM05D000313 ORTHO05D000065 5.2e-19 98.6 201 35.3
C09p46520 Brassica napus HOM05D000313 ORTHO05D000065 6.8e-19 98.2 141 46.1
BolC9t57505H Brassica oleracea HOM05D000313 ORTHO05D000065 6.8e-19 98.2 141 46.1
BcaB03g15206 Brassica carinata HOM05D000313 ORTHO05D000065 1.5e-18 97.1 107 50.5
A03p36970 Brassica napus HOM05D000313 ORTHO05D000065 9.8e-18 94.4 230 34.8
BraA09t37737Z Brassica rapa HOM05D000313 ORTHO05D000065 1.7e-17 93.6 198 35.4
BcaC05g25841 Brassica carinata HOM05D000313 ORTHO05D000065 4.8e-17 92.0 229 32.3
BcaC05g27392 Brassica carinata HOM05D000313 ORTHO05D000065 4.8e-17 92.0 230 31.3
A09p40830 Brassica napus HOM05D000313 ORTHO05D000065 8.3e-17 91.3 230 31.7
BolC5t32063H Brassica oleracea HOM05D000313 ORTHO05D000065 8.3e-17 91.3 116 44.0
BcaNung02470 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-16 90.9 191 33.5
A02p26890 Brassica napus HOM05D000313 ORTHO05D000065 5.4e-16 88.6 230 32.2
C02p24380 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-15 87.4 95 51.6
BcaB01g01178 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-15 87.0 230 30.4
A01p33580 Brassica napus HOM05D000313 ORTHO05D000065 2.7e-15 86.3 134 38.1
A03p65540 Brassica napus HOM05D000313 ORTHO05D000065 4.5e-15 85.5 223 30.9
BcaB05g23049 Brassica carinata HOM05D000313 ORTHO05D000065 5.9e-15 85.1 227 30.4
BcaB05g24308 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-14 84.3 141 37.6
BcaC09g48338 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-14 84.3 237 30.0
BcaB07g33685 Brassica carinata HOM05D000313 ORTHO05D000065 1.7e-14 83.6 230 30.0
BcaC03g15905 Brassica carinata HOM05D000313 ORTHO05D000065 1.7e-14 83.6 87 52.9
BcaB08g35222 Brassica carinata HOM05D000313 ORTHO05D000065 2.9e-14 82.8 168 33.3
C03p49020 Brassica napus HOM05D000313 ORTHO05D000065 3.8e-14 82.4 110 45.5
BcaC01g06813 Brassica carinata HOM05D000313 ORTHO05D021765 6.5e-14 81.6 135 48.1
C01p50060 Brassica napus HOM05D000313 ORTHO05D000065 6.5e-14 81.6 110 44.5
BraA03t12859Z Brassica rapa HOM05D000313 ORTHO05D000065 6.5e-14 81.6 168 36.3
A08p13660 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-13 80.9 110 41.8
C09p62680 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-13 80.9 110 41.8
BolC1t04960H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-13 80.9 110 45.5
BolC8t47721H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-13 80.9 120 44.2
A06p31400 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-13 80.1 110 42.7
A07p36100 Brassica napus HOM05D000313 ORTHO05D000065 4.2e-13 79.0 110 47.3
BcaB07g33686 Brassica carinata HOM05D000313 ORTHO05D000065 9.4e-13 77.8 230 29.1
BcaC09g48412 Brassica carinata HOM05D000313 ORTHO05D000065 9.4e-13 77.8 110 44.5
BraA09t37856Z Brassica rapa HOM05D000313 ORTHO05D000065 9.4e-13 77.8 110 40.0
BraA09t35833Z Brassica rapa HOM05D000313 ORTHO05D000065 1.6e-12 77.0 231 26.8
BcaC05g25218 Brassica carinata HOM05D000313 ORTHO05D000065 2.7e-12 76.3 110 41.8
BcaC07g39367 Brassica carinata HOM05D000313 ORTHO05D000065 3.6e-12 75.9 110 38.2
C03p38560 Brassica napus HOM05D000313 ORTHO05D021765 3.6e-12 75.9 70 60.0
BraA08t34530Z Brassica rapa HOM05D000313 ORTHO05D000065 8.0e-12 74.7 255 27.8
BcaC04g18606 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-11 74.3 169 31.4
A01p07440 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-11 74.3 110 40.0
C02p24580 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-11 74.3 110 42.7
C08p25290 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-11 74.3 63 60.3
BolC8t50151H Brassica oleracea HOM05D000313 ORTHO05D000065 1.0e-11 74.3 63 60.3
BolC9t58587H Brassica oleracea HOM05D000313 ORTHO05D000065 1.4e-11 73.9 157 31.8
BcaC05g28890 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-11 73.6 109 38.5
C08p15350 Brassica napus HOM05D000313 ORTHO05D000065 3.0e-11 72.8 208 31.2
C09p57200 Brassica napus HOM05D000313 ORTHO05D000065 3.0e-11 72.8 162 31.5
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 4.0e-11 72.4 109 38.5
BcaC01g00015 Brassica carinata HOM05D000313 ORTHO05D000065 5.2e-11 72.0 48 70.8
C03p74810 Brassica napus HOM05D000313 ORTHO05D000065 5.2e-11 72.0 48 70.8
BcaNung02812 Brassica carinata HOM05D000313 ORTHO05D000065 6.8e-11 71.6 115 40.9
BcaC02g10703 Brassica carinata HOM05D000313 ORTHO05D000065 1.5e-10 70.5 106 40.6
A04p04790 Brassica napus HOM05D024365 ORTHO05D000065 1.5e-10 70.5 158 35.4
C04p26900 Brassica napus HOM05D000313 ORTHO05D000065 1.5e-10 70.5 106 40.6
BolC4t24108H Brassica oleracea HOM05D000313 ORTHO05D000065 1.5e-10 70.5 106 40.6
BcaB05g23819 Brassica carinata HOM05D000756 ORTHO05D000604 2.0e-10 70.1 69 59.4
BcaC04g20219 Brassica carinata HOM05D000313 ORTHO05D000065 4.4e-10 68.9 245 29.8
C05p47720 Brassica napus HOM05D000313 ORTHO05D000065 4.4e-10 68.9 45 64.4
BcaNung04477 Brassica carinata HOM05D000313 ORTHO05D000065 5.7e-10 68.6 253 27.7
C05p18010 Brassica napus HOM05D000313 ORTHO05D000065 7.5e-10 68.2 213 31.0
C04p33330 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-09 67.4 110 36.4
C08p08710 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-09 67.0 147 36.1
C07p50150 Brassica napus HOM05D000313 ORTHO05D000065 2.2e-09 66.6 76 50.0
BcaB05g24793 Brassica carinata HOM05D000313 ORTHO05D000065 4.9e-09 65.5 122 37.7
BcaC07g38309 Brassica carinata HOM05D000313 ORTHO05D000065 4.9e-09 65.5 48 64.6
C08p10590 Brassica napus HOM05D000313 ORTHO05D000065 4.9e-09 65.5 48 64.6
A09p24570 Brassica napus HOM05D000313 ORTHO05D000065 6.3e-09 65.1 136 33.8
BolC2t09854H Brassica oleracea HOM05D000313 ORTHO05D000065 8.3e-09 64.7 124 37.1
C03p91860 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-08 64.3 51 60.8
BcaB02g11080 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-08 63.5 61 54.1
BcaB06g27595 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-08 63.5 226 26.5
BcaC06g35177 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-08 63.5 177 31.1
C06p50290 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-08 63.5 51 60.8
BraA01t04317Z Brassica rapa HOM05D000313 ORTHO05D000065 1.8e-08 63.5 239 29.3
BcaC02g10521 Brassica carinata HOM05D000313 ORTHO05D000065 3.1e-08 62.8 68 48.5
BolC4t24339H Brassica oleracea HOM05D000313 ORTHO05D000065 3.1e-08 62.8 68 48.5
BolC4t27728H Brassica oleracea HOM05D000313 ORTHO05D024061 3.1e-08 62.8 96 42.7
C01p35780 Brassica napus HOM05D000313 ORTHO05D000065 4.1e-08 62.4 154 31.2
BolC3t21647H Brassica oleracea HOM05D000313 ORTHO05D000065 4.1e-08 62.4 108 38.9
BcaC06g31618 Brassica carinata HOM05D000313 ORTHO05D000065 7.0e-08 61.6 115 34.8
BraA01t04033Z Brassica rapa HOM05D000313 ORTHO05D000065 7.0e-08 61.6 113 37.2
BolC4t22110H Brassica oleracea HOM05D000313 ORTHO05D000065 1.6e-07 60.5 95 37.9
BolC5t33481H Brassica oleracea HOM05D000313 ORTHO05D000065 1.6e-07 60.5 46 63.0
THA.LOC104813725 Tarenaya hassleriana HOM05D000313 ORTHO05D000065 1.6e-07 60.5 64 53.1
BcaC06g35487 Brassica carinata HOM05D000313 ORTHO05D000065 2.0e-07 60.1 108 37.0
BcaC06g36731 Brassica carinata HOM05D000313 ORTHO05D000065 2.0e-07 60.1 106 36.8
BcaC07g36916 Brassica carinata HOM05D000313 ORTHO05D000065 2.0e-07 60.1 40 70.0
A09p44410 Brassica napus HOM05D000313 ORTHO05D101860 2.0e-07 60.1 31 90.3
C01p48110 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-07 60.1 40 70.0
C07p15520 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-07 60.1 108 37.0
BolC7t40506H Brassica oleracea HOM05D000313 ORTHO05D000065 2.0e-07 60.1 106 36.8
BolC8t46904H Brassica oleracea HOM05D000313 ORTHO05D000065 2.0e-07 60.1 40 70.0
BcaB03g16224 Brassica carinata HOM05D000313 ORTHO05D000065 2.7e-07 59.7 105 36.2
BolC7t42040H Brassica oleracea HOM05D000313 ORTHO05D000065 2.7e-07 59.7 128 33.6
C08p23910 Brassica napus HOM05D000313 ORTHO05D000065 3.5e-07 59.3 138 30.4
BcaC02g07868 Brassica carinata HOM05D000313 ORTHO05D024061 4.5e-07 58.9 96 40.6
BcaC09g49275 Brassica carinata HOM05D000313 ORTHO05D000065 4.5e-07 58.9 108 38.9
A08p07610 Brassica napus HOM05D000313 ORTHO05D000065 4.5e-07 58.9 60 55.0
C01p40640 Brassica napus HOM05D000313 ORTHO05D000065 4.5e-07 58.9 108 38.9
C09p33280 Brassica napus HOM05D000313 ORTHO05D000065 4.5e-07 58.9 112 36.6
BolC5t30506H Brassica oleracea HOM05D000313 ORTHO05D000065 4.5e-07 58.9 96 37.5
BolC9t56164H Brassica oleracea HOM05D000313 ORTHO05D000065 4.5e-07 58.9 112 36.6
BcaC02g10550 Brassica carinata HOM05D000313 ORTHO05D000065 5.9e-07 58.5 40 65.0
A01p17050 Brassica napus HOM05D000313 ORTHO05D000065 5.9e-07 58.5 61 49.2
A06p31410 Brassica napus HOM05D000313 ORTHO05D000065 5.9e-07 58.5 40 72.5
A09p29710 Brassica napus HOM05D000313 ORTHO05D000065 5.9e-07 58.5 41 63.4
A10p12060 Brassica napus HOM05D000313 ORTHO05D000065 5.9e-07 58.5 61 49.2
C02p45780 Brassica napus HOM05D000313 ORTHO05D000065 5.9e-07 58.5 40 65.0
C04p27570 Brassica napus HOM05D000313 ORTHO05D000065 5.9e-07 58.5 40 65.0
BolC1t03539H Brassica oleracea HOM05D000313 ORTHO05D000065 5.9e-07 58.5 48 64.6
BolC4t24298H Brassica oleracea HOM05D000313 ORTHO05D000065 5.9e-07 58.5 40 65.0
BolC7t40570H Brassica oleracea HOM05D000313 ORTHO05D000065 5.9e-07 58.5 106 38.7
BraA09t38537Z Brassica rapa HOM05D000313 ORTHO05D000065 5.9e-07 58.5 41 63.4
BcaC03g15710 Brassica carinata HOM05D000313 ORTHO05D000065 7.7e-07 58.2 49 55.1
BcaC05g27194 Brassica carinata HOM05D000313 ORTHO05D000065 7.7e-07 58.2 96 38.5
C09p21420 Brassica napus HOM05D000313 ORTHO05D000065 7.7e-07 58.2 136 31.6
BolC2t09433H Brassica oleracea HOM05D000313 ORTHO05D000065 7.7e-07 58.2 49 55.1
BcaC03g16075 Brassica carinata HOM05D000022 ORTHO05D013684 1.0e-06 57.8 123 35.8
BcaC06g36665 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-06 57.8 106 36.8
BcaC02g08920 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-06 57.4 61 47.5
BcaC03g15391 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-06 57.4 56 48.2
C01p43800 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-06 57.4 56 48.2
C04p49110 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-06 57.4 61 47.5
C08p38360 Brassica napus HOM05D000313 ORTHO05D018747 1.3e-06 57.4 61 57.4
BolC1t03159H Brassica oleracea HOM05D000313 ORTHO05D000065 1.3e-06 57.4 56 48.2
BolC4t26494H Brassica oleracea HOM05D000313 ORTHO05D000065 1.3e-06 57.4 61 47.5
BolC7t43562H Brassica oleracea HOM05D000313 ORTHO05D000065 1.3e-06 57.4 56 48.2
A02p13460 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-06 57.0 57 52.6
A03p45920 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-06 57.0 57 52.6
BolC2t10639H Brassica oleracea HOM05D000313 ORTHO05D000065 1.7e-06 57.0 40 62.5
BraA02t06404Z Brassica rapa HOM05D000313 ORTHO05D000065 1.7e-06 57.0 57 52.6
BcaB07g33821 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-06 56.6 113 34.5
A01p33560 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-06 56.6 57 54.4
C05p46420 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-06 56.6 106 34.9
BcaB01g01233 Brassica carinata HOM05D000313 ORTHO05D000065 2.9e-06 56.2 82 39.0
BcaC01g02161 Brassica carinata HOM05D000313 ORTHO05D000065 2.9e-06 56.2 105 39.0
BcaC02g07753 Brassica carinata HOM05D000313 ORTHO05D000065 2.9e-06 56.2 106 35.8
C01p35750 Brassica napus HOM05D000313 ORTHO05D000065 3.8e-06 55.8 106 34.9
BolC4t23669H Brassica oleracea HOM05D000313 ORTHO05D000065 3.8e-06 55.8 74 41.9
BcaC07g37625 Brassica carinata HOM05D000313 ORTHO05D000065 5.0e-06 55.5 79 36.7
C03p69800 Brassica napus HOM05D000313 ORTHO05D000065 5.0e-06 55.5 56 50.0
C05p56930 Brassica napus HOM05D000313 ORTHO05D000065 5.0e-06 55.5 30 80.0
C07p23830 Brassica napus HOM05D000313 ORTHO05D000065 5.0e-06 55.5 106 34.9
C08p27740 Brassica napus HOM05D000313 ORTHO05D000065 5.0e-06 55.5 145 31.0
BcaB04g16903 Brassica carinata HOM05D000313 ORTHO05D000065 6.6e-06 55.1 57 49.1
A05p21270 Brassica napus HOM05D000313 ORTHO05D000065 6.6e-06 55.1 61 45.9
BolC3t19587H Brassica oleracea HOM05D000313 ORTHO05D000065 6.6e-06 55.1 39 66.7
BraA02t07665Z Brassica rapa HOM05D000313 ORTHO05D024061 6.6e-06 55.1 69 46.4
BraA03t14449Z Brassica rapa HOM05D000313 ORTHO05D000065 6.6e-06 55.1 40 62.5
BcaC04g22281 Brassica carinata HOM05D000313 ORTHO05D000065 8.6e-06 54.7 93 35.5
A01p36390 Brassica napus HOM05D000096 ORTHO05D000045 8.6e-06 54.7 147 29.9
A02p26880 Brassica napus HOM05D000313 ORTHO05D019939 8.6e-06 54.7 62 46.8
C01p04300 Brassica napus HOM05D000313 ORTHO05D000065 8.6e-06 54.7 57 50.9
C05p33640 Brassica napus HOM05D000313 ORTHO05D000065 8.6e-06 54.7 59 50.8
BolC1t03161H Brassica oleracea HOM05D000313 ORTHO05D000065 8.6e-06 54.7 40 57.5
BolC5t32095H Brassica oleracea HOM05D000313 ORTHO05D000065 8.6e-06 54.7 59 50.8
BraA02t07699Z Brassica rapa HOM05D000313 ORTHO05D019939 8.6e-06 54.7 62 46.8


User provided reference genes

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