Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g20783 Brassica carinata HOM05D004182 ORTHO05D010127 1.1e-49 199.5 94 100.0
arahy.Tifrunner.gnm1.ann1.U90T8C Arachis hypogaea HOM05D004182 ORTHO05D010127 1.4e-44 182.6 109 84.4
arahy.Tifrunner.gnm1.ann1.9XT8BN Arachis hypogaea HOM05D001966 ORTHO05D010127 1.9e-44 182.2 108 84.3
EL10Ac7g17373 Beta vulgaris HOM05D004182 ORTHO05D010127 1.9e-44 182.2 108 83.3
arahy.Tifrunner.gnm1.ann1.H5WC3R Arachis hypogaea HOM05D001966 ORTHO05D011119 1.0e-42 176.4 105 83.8
C09p39340 Brassica napus HOM05D001966 ORTHO05D007227 1.6e-40 169.1 80 100.0
C09p40270 Brassica napus HOM05D004182 ORTHO05D007321 1.6e-40 169.1 80 100.0
BraSC59t46507Z Brassica rapa HOM05D004182 ORTHO05D010127 1.6e-40 169.1 80 100.0
BolSC29t60540H Brassica oleracea HOM05D004182 ORTHO05D007321 2.1e-40 168.7 79 100.0
BolSC35t60684H Brassica oleracea HOM05D004182 ORTHO05D007321 2.1e-40 168.7 79 100.0
BolSC44t60815H Brassica oleracea HOM05D004182 ORTHO05D010127 2.1e-40 168.7 79 100.0
BolSC44t60830H Brassica oleracea HOM05D004182 ORTHO05D007321 2.1e-40 168.7 79 100.0
BolSC45t60917H Brassica oleracea HOM05D004182 ORTHO05D007321 2.1e-40 168.7 79 100.0
BolSC49t61134H Brassica oleracea HOM05D004182 ORTHO05D007321 2.1e-40 168.7 79 100.0
BraSC103t45421Z Brassica rapa HOM05D004182 ORTHO05D007321 2.1e-40 168.7 79 100.0
BraSC103t45434Z Brassica rapa HOM05D004182 ORTHO05D010127 2.1e-40 168.7 79 100.0
BraSC138t45528Z Brassica rapa HOM05D004182 ORTHO05D007321 2.1e-40 168.7 79 100.0
BraSC25t45903Z Brassica rapa HOM05D004182 ORTHO05D010127 2.1e-40 168.7 79 100.0
BraSC25t45918Z Brassica rapa HOM05D004182 ORTHO05D007321 2.1e-40 168.7 79 100.0
BraSC59t46534Z Brassica rapa HOM05D004182 ORTHO05D007321 2.1e-40 168.7 79 100.0
C04p22500 Brassica napus HOM05D004182 ORTHO05D010127 1.0e-34 149.8 96 79.2
C09p24670 Brassica napus HOM05D001966 ORTHO05D007227 4.0e-31 137.9 74 87.8
arahy.Tifrunner.gnm1.ann1.WY6BZE Arachis hypogaea HOM05D004182 ORTHO05D010127 1.3e-29 132.9 110 64.5
Hma1.2p1_0594F.1_g185814 Hydrangea macrophylla HOM05D004182 ORTHO05D010127 1.1e-28 129.8 60 100.0
Hma1.2p1_3221F.1_g334073 Hydrangea macrophylla HOM05D004182 ORTHO05D010127 1.1e-28 129.8 60 100.0
BraSC59t46527Z Brassica rapa HOM05D004182 ORTHO05D010127 2.5e-28 128.6 63 95.2
Cpa.g.sc2529.2 Carica papaya HOM05D004182 ORTHO05D010127 9.3e-28 126.7 100 69.0
Ca_24280_v3 Cicer arietinum L. HOM05D004182 ORTHO05D007321 8.2e-24 113.6 56 94.6
SEGI_11050 Sequoiadendron giganteum HOM05D004182 ORTHO05D010127 1.2e-19 99.8 60 76.7
arahy.Tifrunner.gnm1.ann1.CSY78X Arachis hypogaea HOM05D000216 ORTHO05D000634 6.0e-19 97.4 48 93.8
Glyma.05G084375 Glycine max HOM05D004182 ORTHO05D010127 9.7e-17 90.1 101 53.5
BolSC46t60966H Brassica oleracea HOM05D004182 ORTHO05D007321 3.7e-16 88.2 40 100.0
Oeu008622.1 Olea europaea HOM05D000866 ORTHO05D000673 2.6e-14 82.0 47 80.9
BcaC04g22013 Brassica carinata HOM05D004182 ORTHO05D010127 4.5e-14 81.3 88 52.3
Peaxi162Scf00263g00168 Petunia axillaris HOM05D001966 ORTHO05D010127 1.7e-13 79.3 63 66.7
LjContig00318g0013893 Lotus japonicus HOM05D004182 ORTHO05D007321 1.9e-12 75.9 34 100.0
SEGI_32360 Sequoiadendron giganteum HOM05D004182 ORTHO05D010127 3.2e-12 75.1 65 61.5
Gohir.A01G139755 Gossypium hirsutum HOM05D001966 ORTHO05D010127 7.2e-12 73.9 43 79.1
Nitab4.5_0018109g0010 Nicotiana tabacum HOM05D001966 ORTHO05D010127 1.2e-11 73.2 34 97.1
TPR.G18363 Trifolium pratense HOM05D000107 ORTHO05D000062 1.6e-11 72.8 43 81.4
Sopen11g020180 Solanum pennellii HOM05D001966 ORTHO05D010127 2.7e-11 72.0 43 79.1
Cpa.g.sc302.2 Carica papaya HOM05D001966 ORTHO05D010127 4.6e-11 71.2 43 81.4
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 4.6e-11 71.2 33 97.0
Gohir.1Z049792 Gossypium hirsutum HOM05D001966 ORTHO05D010127 4.6e-11 71.2 43 81.4
Gohir.1Z050082 Gossypium hirsutum HOM05D001966 ORTHO05D010127 4.6e-11 71.2 43 81.4
Gohir.1Z050966 Gossypium hirsutum HOM05D001966 ORTHO05D010127 4.6e-11 71.2 43 81.4
Gohir.A04G039225 Gossypium hirsutum HOM05D001966 ORTHO05D010127 4.6e-11 71.2 43 81.4
Lsat_1_v5_gn_6_14541 Lactuca sativa HOM05D001966 ORTHO05D010127 4.6e-11 71.2 43 79.1
Lsat_1_v5_gn_6_14561 Lactuca sativa HOM05D001966 ORTHO05D010127 4.6e-11 71.2 34 94.1
Nn029s41582 Nelumbo nucifera HOM05D001966 ORTHO05D010127 6.1e-11 70.9 43 79.1
Nn031s41607 Nelumbo nucifera HOM05D001966 ORTHO05D010127 6.1e-11 70.9 43 79.1
Nn064s42219 Nelumbo nucifera HOM05D001966 ORTHO05D010127 6.1e-11 70.9 43 79.1
Nn212s45204 Nelumbo nucifera HOM05D001966 ORTHO05D010127 6.1e-11 70.9 43 79.1
Nn264s45948 Nelumbo nucifera HOM05D001966 ORTHO05D010127 6.1e-11 70.9 43 79.1
Nn304s46230 Nelumbo nucifera HOM05D001966 ORTHO05D010127 6.1e-11 70.9 43 79.1
Nn349s46476 Nelumbo nucifera HOM05D001966 ORTHO05D010127 6.1e-11 70.9 43 79.1
Nn403s46569 Nelumbo nucifera HOM05D001966 ORTHO05D010127 6.1e-11 70.9 43 79.1
Nn442s46689 Nelumbo nucifera HOM05D001966 ORTHO05D010127 6.1e-11 70.9 43 79.1
Nn4g25380 Nelumbo nucifera HOM05D001966 ORTHO05D010127 6.1e-11 70.9 43 79.1
Nitab4.5_0003644g0040 Nicotiana tabacum HOM05D001966 ORTHO05D010127 7.9e-11 70.5 43 76.7
arahy.Tifrunner.gnm1.ann1.SGU002 Arachis hypogaea HOM05D000213 ORTHO05D000426 1.0e-10 70.1 33 97.0
arahy.Tifrunner.gnm1.ann1.CV40CV Arachis hypogaea HOM05D001966 ORTHO05D010127 1.4e-10 69.7 34 91.2
Nn6g32819 Nelumbo nucifera HOM05D001966 ORTHO05D010127 1.8e-10 69.3 34 91.2
Gohir.D11G306003 Gossypium hirsutum HOM05D001966 ORTHO05D010127 2.3e-10 68.9 79 53.2
FAN13G1592 Fragaria x ananassa HOM05D001966 ORTHO05D010127 3.0e-10 68.6 34 88.2
Gohir.A06G123204 Gossypium hirsutum HOM05D001966 ORTHO05D010127 1.1e-09 66.6 43 74.4
Oeu015214.1 Olea europaea HOM05D005133 ORTHO05D006685 1.1e-09 66.6 40 80.0
Nitab4.5_0006306g0030 Nicotiana tabacum HOM05D001966 ORTHO05D010127 2.0e-09 65.9 43 74.4
arahy.Tifrunner.gnm1.ann1.UVG9XA Arachis hypogaea HOM05D001966 ORTHO05D010127 7.4e-09 63.9 34 85.3
BolSC29t60554H Brassica oleracea HOM05D004182 ORTHO05D007321 9.7e-09 63.5 29 100.0
BolSC35t60712H Brassica oleracea HOM05D004182 ORTHO05D007321 9.7e-09 63.5 29 100.0
Sopen03g036740 Solanum pennellii HOM05D001966 ORTHO05D010127 1.3e-08 63.2 34 82.4
Gohir.D01G134240 Gossypium hirsutum HOM05D001966 ORTHO05D010127 2.2e-08 62.4 34 85.3
Nn1g00555 Nelumbo nucifera HOM05D001966 ORTHO05D010127 2.8e-08 62.0 34 82.4
Glyma.20G027700 Glycine max HOM05D001966 ORTHO05D010127 3.7e-08 61.6 44 65.9
Peaxi162Scf01071g00036 Petunia axillaris HOM05D001966 ORTHO05D010127 6.3e-08 60.8 43 72.1
Gohir.A05G327708 Gossypium hirsutum HOM05D001966 ORTHO05D010127 1.4e-07 59.7 35 80.0
Gorai.002G166100 Gossypium raimondii HOM05D001966 ORTHO05D010127 1.8e-07 59.3 34 82.4
DCAR_007750 Daucus carota HOM05D000444 ORTHO05D000489 3.1e-07 58.5 26 96.2
Gorai.011G180000 Gossypium raimondii HOM05D001966 ORTHO05D010127 6.9e-07 57.4 33 81.8
Gorai.007G326200 Gossypium raimondii HOM05D001966 ORTHO05D010127 1.5e-06 56.2 34 82.4
Phvul.008G246600 Phaseolus vulgaris HOM05D001966 ORTHO05D010127 2.6e-06 55.5 43 67.4
Oeu012760.1 Olea europaea HOM05D001966 ORTHO05D010127 3.4e-06 55.1 53 58.5
arahy.Tifrunner.gnm1.ann1.0KS2YP Arachis hypogaea HOM05D004182 ORTHO05D007321 5.9e-06 54.3 29 82.8


User provided reference genes

Program Settings