Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g20747 Brassica carinata HOM05D000496 ORTHO05D000411 7.6e-43 176.8 91 100.0
BcaC04g20748 Brassica carinata HOM05D000496 ORTHO05D000411 5.1e-39 164.1 84 100.0
BcaC02g11190 Brassica carinata HOM05D000496 ORTHO05D031866 2.5e-38 161.8 84 98.8
BcaC05g27057 Brassica carinata HOM05D000625 ORTHO05D000467 1.6e-37 159.1 84 97.6
BcaC06g34940 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-37 157.9 84 96.4
BcaC07g37489 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-27 126.3 84 82.1
BcaC02g10608 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-15 86.7 88 58.0
BcaC04g19988 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-13 79.7 69 60.9
BcaC06g35367 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-13 78.6 49 85.7
BcaC01g02185 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-13 78.2 69 62.3
BcaB05g23634 Brassica carinata HOM05D000496 ORTHO05D000411 8.2e-13 77.0 86 51.2
BcaC04g20907 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-12 75.9 69 58.0
C09p38100 Brassica napus HOM05D000496 ORTHO05D000411 1.8e-12 75.9 69 58.0
BolC9t56646H Brassica oleracea HOM05D000496 ORTHO05D000411 1.8e-12 75.9 69 58.0
BcaC01g01334 Brassica carinata HOM05D000496 ORTHO05D031866 2.4e-12 75.5 69 59.4
BcaB03g16449 Brassica carinata HOM05D000496 ORTHO05D000411 5.3e-12 74.3 78 53.8
BcaC03g15779 Brassica carinata HOM05D001075 ORTHO05D001779 5.3e-12 74.3 85 50.6
BcaC07g37384 Brassica carinata HOM05D000496 ORTHO05D015464 9.1e-12 73.6 70 60.0
BcaC03g16876 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-11 73.2 92 47.8
BcaC05g28189 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-10 69.7 84 56.0
BcaB05g22924 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-10 68.9 74 56.8
BcaC07g38447 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-09 66.2 86 51.2
A09p25190 Brassica napus HOM05D000496 ORTHO05D024139 2.1e-08 62.4 71 50.7
BolC9t58039H Brassica oleracea HOM05D000496 ORTHO05D024139 2.1e-08 62.4 71 49.3
BcaB01g01424 Brassica carinata HOM05D000496 ORTHO05D000411 6.1e-08 60.8 68 48.5
BcaC07g37689 Brassica carinata HOM05D000496 ORTHO05D000411 6.1e-08 60.8 87 40.2
BraA05t22059Z Brassica rapa HOM05D000496 ORTHO05D024139 6.1e-08 60.8 71 49.3
BcaC02g10623 Brassica carinata HOM05D003757 ORTHO05D004892 1.0e-07 60.1 87 41.4
BcaC01g02355 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-07 59.7 87 39.1
BolC9t55245H Brassica oleracea HOM05D000165 ORTHO05D001328 1.4e-07 59.7 70 48.6
BcaC04g20746 Brassica carinata HOM05D011171 ORTHO05D000411 1.8e-07 59.3 78 50.0
BcaC09g49845 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-07 59.3 87 39.1
BolC7t41893H Brassica oleracea HOM05D000496 ORTHO05D000411 3.0e-07 58.5 71 49.3
BcaC06g35199 Brassica carinata HOM05D000496 ORTHO05D000411 6.7e-07 57.4 91 40.7
BolC5t32326H Brassica oleracea HOM05D000496 ORTHO05D032758 6.7e-07 57.4 68 44.1
BcaB05g23868 Brassica carinata HOM05D000496 ORTHO05D016019 8.8e-07 57.0 75 48.0
BcaC02g11189 Brassica carinata HOM05D000496 ORTHO05D011778 8.8e-07 57.0 85 43.5
BcaC05g27332 Brassica carinata HOM05D000048 ORTHO05D000411 8.8e-07 57.0 69 50.7
BcaC03g16224 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-06 56.6 72 47.2
BcaC02g10863 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-06 56.2 92 44.6
BcaC03g16547 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-06 56.2 87 40.2
BcaC04g21670 Brassica carinata HOM05D000496 ORTHO05D011778 1.5e-06 56.2 85 43.5
C04p24340 Brassica napus HOM05D000496 ORTHO05D015464 1.5e-06 56.2 92 44.6
BcaC06g33280 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-06 55.8 73 47.9
BcaC04g21077 Brassica carinata HOM05D000496 ORTHO05D000411 2.6e-06 55.5 77 49.4
BcaC07g38017 Brassica carinata HOM05D000496 ORTHO05D015464 3.3e-06 55.1 72 45.8
BcaC04g20777 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-06 54.7 84 36.9
BcaC08g43794 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-06 54.7 89 39.3
C09p39390 Brassica napus HOM05D000496 ORTHO05D000411 4.4e-06 54.7 84 36.9
BolC9t56812H Brassica oleracea HOM05D000496 ORTHO05D000411 4.4e-06 54.7 84 36.9
BcaC05g27615 Brassica carinata HOM05D000496 ORTHO05D032758 5.7e-06 54.3 68 42.6
BcaC07g37354 Brassica carinata HOM05D000496 ORTHO05D000411 5.7e-06 54.3 69 49.3
BcaC08g43573 Brassica carinata HOM05D000496 ORTHO05D000411 5.7e-06 54.3 76 40.8
C05p36020 Brassica napus HOM05D000496 ORTHO05D000411 5.7e-06 54.3 68 42.6
BcaC01g02914 Brassica carinata HOM05D000496 ORTHO05D000411 7.4e-06 53.9 76 42.1
BcaC03g16322 Brassica carinata HOM05D000496 ORTHO05D000411 9.7e-06 53.5 87 37.9
BcaC06g34642 Brassica carinata HOM05D000496 ORTHO05D015464 9.7e-06 53.5 72 45.8


User provided reference genes

Program Settings