Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g20743 Brassica carinata HOM05D006289 ORTHO05D027118 4.3e-300 1033.9 515 100.0
C09p39670 Brassica napus HOM05D005627 ORTHO05D021730 3.0e-152 542.7 299 93.3
BolC9t56847H Brassica oleracea HOM05D005627 ORTHO05D021730 7.1e-146 521.5 280 95.7
BolC9t56845H Brassica oleracea HOM05D006289 ORTHO05D027118 1.3e-134 484.2 249 95.6
C09p39660 Brassica napus HOM05D006289 ORTHO05D027118 6.9e-133 478.4 237 99.2
A09p28380 Brassica napus HOM05D005627 ORTHO05D021730 3.3e-111 406.4 292 71.9
A09p28360 Brassica napus HOM05D006289 ORTHO05D027118 2.5e-98 363.6 238 76.1
BraA05t20012Z Brassica rapa HOM05D005627 ORTHO05D021730 1.2e-76 291.6 281 58.0
BcaB03g16259 Brassica carinata HOM05D005627 ORTHO05D021730 3.0e-59 233.8 288 51.4
BraA05t20010Z Brassica rapa HOM05D006289 ORTHO05D028190 1.8e-56 224.6 254 51.6
BcaB01g01914 Brassica carinata HOM05D005627 ORTHO05D009842 3.0e-35 154.1 250 40.8
BraA01t02123Z Brassica rapa HOM05D006289 ORTHO05D028190 1.1e-34 152.1 197 48.7
C05p28910 Brassica napus HOM05D005627 ORTHO05D031886 9.6e-34 149.1 236 41.1
BolC5t31612H Brassica oleracea HOM05D005627 ORTHO05D031886 9.6e-34 149.1 236 41.1
BcaC05g27033 Brassica carinata HOM05D005627 ORTHO05D031886 2.1e-33 147.9 238 40.8
BcaB01g00118 Brassica carinata HOM05D005627 ORTHO05D009842 9.0e-32 142.5 185 45.9
BolC2t10570H Brassica oleracea HOM05D006289 ORTHO05D040995 1.5e-31 141.7 256 37.5
BcaB08g34566 Brassica carinata HOM05D005627 ORTHO05D009842 2.0e-31 141.4 272 37.9
C03p66840 Brassica napus HOM05D006289 ORTHO05D017568 3.4e-31 140.6 244 38.1
BcaB07g30175 Brassica carinata HOM05D005627 ORTHO05D019933 3.2e-29 134.0 285 33.0
BcaC08g47004 Brassica carinata HOM05D005627 ORTHO05D019933 4.2e-29 133.7 256 37.1
BcaB04g18536 Brassica carinata HOM05D005627 ORTHO05D009842 1.6e-28 131.7 220 38.6
BcaB05g23251 Brassica carinata HOM05D005627 ORTHO05D009842 6.0e-28 129.8 223 39.0
BcaC01g03482 Brassica carinata HOM05D006289 ORTHO05D032299 7.9e-28 129.4 243 35.8
C01p43410 Brassica napus HOM05D006289 ORTHO05D017568 8.7e-27 125.9 237 35.4
BcaB03g16579 Brassica carinata HOM05D006289 ORTHO05D019933 2.5e-26 124.4 337 29.7
BcaB04g17888 Brassica carinata HOM05D005627 ORTHO05D017568 2.5e-26 124.4 179 40.2
A04p11360 Brassica napus HOM05D005627 ORTHO05D019933 2.5e-26 124.4 262 37.4
BraA04t16798Z Brassica rapa HOM05D005627 ORTHO05D019933 2.5e-26 124.4 262 37.4
BcaC08g46979 Brassica carinata HOM05D005627 ORTHO05D019933 3.3e-26 124.0 329 31.6
BraA02t08906Z Brassica rapa HOM05D005627 ORTHO05D019933 2.1e-25 121.3 262 36.6
BcaC05g27035 Brassica carinata HOM05D006289 ORTHO05D032057 3.7e-25 120.6 134 50.0
C05p28920 Brassica napus HOM05D006289 ORTHO05D032057 3.7e-25 120.6 134 50.0
BolC5t31614H Brassica oleracea HOM05D006289 ORTHO05D032057 3.7e-25 120.6 134 50.0
BolC3t18952H Brassica oleracea HOM05D006289 ORTHO05D017568 4.8e-25 120.2 165 41.8
BolC9t59378H Brassica oleracea HOM05D006289 ORTHO05D017568 1.1e-24 119.0 269 33.8
C03p74240 Brassica napus HOM05D006289 ORTHO05D028190 1.8e-24 118.2 72 73.6
BolC3t19682H Brassica oleracea HOM05D006289 ORTHO05D028190 1.8e-24 118.2 72 73.6
BraA01t02126Z Brassica rapa HOM05D005627 ORTHO05D021730 1.8e-24 118.2 88 68.2
BcaC03g16702 Brassica carinata HOM05D006289 ORTHO05D039115 4.0e-24 117.1 102 54.9
C02p45490 Brassica napus HOM05D006289 ORTHO05D039115 5.3e-24 116.7 107 52.3
BolC9t58083H Brassica oleracea HOM05D006289 ORTHO05D018698 6.9e-24 116.3 131 50.4
BcaB06g26983 Brassica carinata HOM05D005627 ORTHO05D039808 1.5e-23 115.2 101 50.5
C09p50140 Brassica napus HOM05D006289 ORTHO05D024275 2.0e-23 114.8 253 36.0
BcaB04g19296 Brassica carinata HOM05D006289 ORTHO05D017564 2.6e-23 114.4 262 32.8
C05p37190 Brassica napus HOM05D005627 ORTHO05D024275 3.4e-23 114.0 98 53.1
BcaB08g35417 Brassica carinata HOM05D006289 ORTHO05D024275 5.8e-23 113.2 271 33.9
C09p12390 Brassica napus HOM05D005627 ORTHO05D032198 1.3e-22 112.1 137 43.1
BcaC04g19240 Brassica carinata HOM05D006289 ORTHO05D017568 2.9e-22 110.9 111 50.5
BcaC04g21092 Brassica carinata HOM05D005627 ORTHO05D031749 3.8e-22 110.5 97 52.6
C09p35790 Brassica napus HOM05D005627 ORTHO05D031749 3.8e-22 110.5 97 52.6
BolC9t56413H Brassica oleracea HOM05D005627 ORTHO05D031749 3.8e-22 110.5 97 52.6
BcaC01g02303 Brassica carinata HOM05D006289 ORTHO05D018698 8.4e-22 109.4 131 45.8
C03p52020 Brassica napus HOM05D006289 ORTHO05D032299 8.4e-22 109.4 219 35.2
BolC3t17484H Brassica oleracea HOM05D006289 ORTHO05D032299 8.4e-22 109.4 219 35.2
BcaB01g00831 Brassica carinata HOM05D005627 ORTHO05D009842 1.4e-21 108.6 101 50.5
BcaB08g34781 Brassica carinata HOM05D005627 ORTHO05D009842 1.2e-20 105.5 101 46.5
BcaC09g49023 Brassica carinata HOM05D006289 ORTHO05D018698 2.1e-20 104.8 149 44.3
BcaC04g19885 Brassica carinata HOM05D005627 ORTHO05D017564 6.0e-20 103.2 97 48.5
BcaB03g14785 Brassica carinata HOM05D006289 ORTHO05D009842 3.3e-18 97.4 90 45.6
BcaB04g19628 Brassica carinata HOM05D005627 ORTHO05D017564 3.3e-18 97.4 234 32.1
C08p09320 Brassica napus HOM05D006289 ORTHO05D017568 1.4e-16 92.0 79 46.8
C09p52190 Brassica napus HOM05D044182 ORTHO05D102078 3.1e-16 90.9 131 44.3
A01p24510 Brassica napus HOM05D006289 ORTHO05D016037 2.0e-15 88.2 102 43.1
BcaB01g01204 Brassica carinata HOM05D006289 ORTHO05D019882 2.9e-14 84.3 88 40.9
A05p13630 Brassica napus HOM05D006289 ORTHO05D027692 3.8e-14 84.0 90 44.4
BraA05t20302Z Brassica rapa HOM05D006289 ORTHO05D027692 3.8e-14 84.0 90 44.4
A05p27900 Brassica napus HOM05D006289 ORTHO05D009842 8.4e-14 82.8 88 44.3
C01p11540 Brassica napus HOM05D005627 ORTHO05D009842 1.4e-13 82.0 90 41.1
C02p45470 Brassica napus HOM05D006289 ORTHO05D103884 1.4e-13 82.0 68 55.9
BraA04t16495Z Brassica rapa HOM05D006289 ORTHO05D016037 1.9e-13 81.6 102 41.2
A07p02750 Brassica napus HOM05D006289 ORTHO05D009842 3.2e-13 80.9 88 43.2
A02p27270 Brassica napus HOM05D006289 ORTHO05D040814 4.2e-13 80.5 88 45.5
BraA02t07752Z Brassica rapa HOM05D006289 ORTHO05D040814 4.2e-13 80.5 88 45.5
A02p12540 Brassica napus HOM05D006289 ORTHO05D009842 7.2e-13 79.7 88 43.2
C02p52110 Brassica napus HOM05D005627 ORTHO05D040212 7.2e-13 79.7 123 34.1
BolC2t11295H Brassica oleracea HOM05D005627 ORTHO05D040212 7.2e-13 79.7 123 34.1
BraA10t43450Z Brassica rapa HOM05D006289 ORTHO05D009842 7.2e-13 79.7 88 43.2
C07p21860 Brassica napus HOM05D006289 ORTHO05D009842 1.6e-12 78.6 88 42.0
BcaB06g28130 Brassica carinata HOM05D006289 ORTHO05D016037 2.1e-12 78.2 81 40.7
C01p21290 Brassica napus HOM05D006289 ORTHO05D009842 3.5e-12 77.4 176 31.2
BraA05t21307Z Brassica rapa HOM05D006289 ORTHO05D009842 3.5e-12 77.4 88 42.0
BcaB04g18139 Brassica carinata HOM05D006289 ORTHO05D009842 4.6e-12 77.0 228 26.3
C09p65560 Brassica napus HOM05D006289 ORTHO05D017568 4.6e-12 77.0 49 67.3
A05p28230 Brassica napus HOM05D006289 ORTHO05D009842 6.1e-12 76.6 88 42.0
BraA05t21704Z Brassica rapa HOM05D006289 ORTHO05D009842 6.1e-12 76.6 88 42.0
C02p24040 Brassica napus HOM05D006289 ORTHO05D009842 1.0e-11 75.9 143 31.5
A09p34760 Brassica napus HOM05D006289 ORTHO05D009842 1.3e-11 75.5 88 42.0
BolC7t42041H Brassica oleracea HOM05D006289 ORTHO05D016037 2.3e-11 74.7 89 42.7
A01p23190 Brassica napus HOM05D006289 ORTHO05D033772 3.0e-11 74.3 125 33.6
BraA01t02228Z Brassica rapa HOM05D006289 ORTHO05D033772 3.0e-11 74.3 125 33.6
BraA07t28814Z Brassica rapa HOM05D006289 ORTHO05D009842 3.0e-11 74.3 177 32.2
BolC8t48148H Brassica oleracea HOM05D006289 ORTHO05D033772 3.9e-11 73.9 125 33.6
BraA03t09393Z Brassica rapa HOM05D006289 ORTHO05D016037 6.7e-11 73.2 89 40.4
BraA06t25337Z Brassica rapa HOM05D006289 ORTHO05D009842 6.7e-11 73.2 189 29.6
BcaNung00230 Brassica carinata HOM05D006289 ORTHO05D027553 8.7e-11 72.8 88 42.0
A08p09530 Brassica napus HOM05D006289 ORTHO05D019882 8.7e-11 72.8 80 43.8
BraA04t17266Z Brassica rapa HOM05D006289 ORTHO05D019882 8.7e-11 72.8 80 43.8
BraA08t32951Z Brassica rapa HOM05D006289 ORTHO05D019882 8.7e-11 72.8 80 43.8
BcaB02g10844 Brassica carinata HOM05D006289 ORTHO05D016037 1.1e-10 72.4 89 40.4
C07p15540 Brassica napus HOM05D006289 ORTHO05D016037 1.5e-10 72.0 133 34.6
BcaB03g12380 Brassica carinata HOM05D006289 ORTHO05D092672 1.9e-10 71.6 89 41.6
C02p45460 Brassica napus HOM05D044182 ORTHO05D102825 2.5e-10 71.2 147 37.4
BraA07t28776Z Brassica rapa HOM05D005627 ORTHO05D017568 2.5e-10 71.2 49 61.2
BcaC09g49041 Brassica carinata HOM05D006289 ORTHO05D032439 7.4e-10 69.7 81 40.7
A04p16270 Brassica napus HOM05D006289 ORTHO05D019882 7.4e-10 69.7 123 34.1
C09p42080 Brassica napus HOM05D006289 ORTHO05D016037 7.4e-10 69.7 147 33.3
BcaB01g01126 Brassica carinata HOM05D006289 ORTHO05D091123 1.6e-09 68.6 158 32.9
BcaC05g27731 Brassica carinata HOM05D006289 ORTHO05D024275 2.2e-09 68.2 245 31.0
BraA02t06823Z Brassica rapa HOM05D005627 ORTHO05D011792 2.2e-09 68.2 91 35.2
BolC9t57872H Brassica oleracea HOM05D006289 ORTHO05D024275 4.8e-09 67.0 77 51.9
A05p20430 Brassica napus HOM05D006289 ORTHO05D009842 6.3e-09 66.6 88 43.2
A04p11380 Brassica napus HOM05D001038 ORTHO05D000395 8.2e-09 66.2 53 52.8
BraA02t08907Z Brassica rapa HOM05D001038 ORTHO05D000395 8.2e-09 66.2 53 52.8
BcaC06g34913 Brassica carinata HOM05D006289 ORTHO05D009842 1.1e-08 65.9 82 42.7
C05p36670 Brassica napus HOM05D008838 ORTHO05D017578 1.1e-08 65.9 108 33.3
BraA04t16800Z Brassica rapa HOM05D001038 ORTHO05D000395 1.1e-08 65.9 48 56.2
BolC4t26246H Brassica oleracea HOM05D008838 ORTHO05D017574 1.4e-08 65.5 102 34.3
C05p48960 Brassica napus HOM05D008838 ORTHO05D017578 1.8e-08 65.1 108 33.3
BraA07t28074Z Brassica rapa HOM05D006289 ORTHO05D009842 1.8e-08 65.1 118 31.4
BolC9t58939H Brassica oleracea HOM05D008838 ORTHO05D011792 2.4e-08 64.7 91 30.8
BcaB01g01600 Brassica carinata HOM05D009418 ORTHO05D092871 4.1e-08 63.9 94 35.1
A05p23620 Brassica napus HOM05D008838 ORTHO05D017574 6.9e-08 63.2 105 32.4
C06p38200 Brassica napus HOM05D005627 ORTHO05D011976 6.9e-08 63.2 97 30.9
BraA05t21230Z Brassica rapa HOM05D008838 ORTHO05D017574 6.9e-08 63.2 105 32.4
BcaB04g17340 Brassica carinata HOM05D009418 ORTHO05D009842 9.0e-08 62.8 98 32.7
BcaC08g44170 Brassica carinata HOM05D009418 ORTHO05D017574 9.0e-08 62.8 105 31.4
BolC6t36759H Brassica oleracea HOM05D008838 ORTHO05D017574 9.0e-08 62.8 105 31.4
C01p43400 Brassica napus HOM05D025394 ORTHO05D018698 1.2e-07 62.4 61 55.7
BcaB03g15637 Brassica carinata HOM05D009418 ORTHO05D027366 1.5e-07 62.0 88 33.0
BcaC06g35485 Brassica carinata HOM05D006289 ORTHO05D016037 1.5e-07 62.0 125 33.6
BcaC03g17142 Brassica carinata HOM05D005627 ORTHO05D011976 2.0e-07 61.6 97 28.9
BcaC08g44443 Brassica carinata HOM05D008838 ORTHO05D017578 2.0e-07 61.6 108 31.5
BcaNung05731 Brassica carinata HOM05D005627 ORTHO05D011976 2.0e-07 61.6 266 25.2
C06p18890 Brassica napus HOM05D008838 ORTHO05D017578 2.0e-07 61.6 108 31.5
BolC2t11140H Brassica oleracea HOM05D005627 ORTHO05D011976 2.0e-07 61.6 97 28.9
BcaC06g36127 Brassica carinata HOM05D013280 ORTHO05D011792 3.4e-07 60.8 91 33.0
BolC7t41167H Brassica oleracea HOM05D005627 ORTHO05D011792 3.4e-07 60.8 91 33.0
BraA09t41982Z Brassica rapa HOM05D005627 ORTHO05D011792 5.9e-07 60.1 91 31.9
BcaB02g10994 Brassica carinata HOM05D005627 ORTHO05D011976 7.7e-07 59.7 198 24.2
BcaC02g11662 Brassica carinata HOM05D005627 ORTHO05D011792 7.7e-07 59.7 91 31.9
C04p12610 Brassica napus HOM05D005627 ORTHO05D011792 7.7e-07 59.7 91 31.9
BolC4t22910H Brassica oleracea HOM05D005627 ORTHO05D011792 7.7e-07 59.7 91 31.9
BraA07t28778Z Brassica rapa HOM05D025394 ORTHO05D018698 7.7e-07 59.7 47 66.0
A07p31520 Brassica napus HOM05D008838 ORTHO05D028150 1.0e-06 59.3 91 36.3
C03p66830 Brassica napus HOM05D025394 ORTHO05D018698 1.0e-06 59.3 61 54.1
BolC3t18951H Brassica oleracea HOM05D025394 ORTHO05D018698 1.0e-06 59.3 61 54.1
BraA06t25336Z Brassica rapa HOM05D001038 ORTHO05D028293 1.0e-06 59.3 94 33.0
A10p17400 Brassica napus HOM05D008838 ORTHO05D028150 1.3e-06 58.9 91 36.3
C07p34790 Brassica napus HOM05D008838 ORTHO05D028150 1.3e-06 58.9 91 36.3
BolC7t44007H Brassica oleracea HOM05D005627 ORTHO05D028150 1.3e-06 58.9 91 36.3
BcaC08g44143 Brassica carinata HOM05D008838 ORTHO05D011792 1.7e-06 58.5 76 38.2
BcaC08g46023 Brassica carinata HOM05D005627 ORTHO05D011976 1.7e-06 58.5 95 30.5
C07p07500 Brassica napus HOM05D013280 ORTHO05D011792 1.7e-06 58.5 89 32.6
C07p12180 Brassica napus HOM05D005627 ORTHO05D011976 1.7e-06 58.5 97 28.9
BolC7t41624H Brassica oleracea HOM05D006289 ORTHO05D027553 1.7e-06 58.5 96 32.3
BolC7t41685H Brassica oleracea HOM05D005627 ORTHO05D011976 1.7e-06 58.5 97 28.9
BolC8t49548H Brassica oleracea HOM05D008838 ORTHO05D011792 2.2e-06 58.2 91 35.2
BraA06t24709Z Brassica rapa HOM05D025394 ORTHO05D018698 2.2e-06 58.2 47 63.8
BcaC06g35917 Brassica carinata HOM05D005627 ORTHO05D011976 2.9e-06 57.8 97 27.8
BcaC09g48466 Brassica carinata HOM05D008838 ORTHO05D011792 2.9e-06 57.8 96 32.3
A03p51090 Brassica napus HOM05D008838 ORTHO05D039997 2.9e-06 57.8 91 34.1
A06p10200 Brassica napus HOM05D006289 ORTHO05D019882 2.9e-06 57.8 48 54.2
BolC7t41413H Brassica oleracea HOM05D005627 ORTHO05D011976 2.9e-06 57.8 97 27.8
BcaB02g06726 Brassica carinata HOM05D009418 ORTHO05D094631 3.8e-06 57.4 81 30.9
BcaC07g37194 Brassica carinata HOM05D005627 ORTHO05D011976 3.8e-06 57.4 97 29.9
BcaC06g35675 Brassica carinata HOM05D005627 ORTHO05D011976 8.5e-06 56.2 97 27.8
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 8.5e-06 56.2 88 33.0
BraA01t02229Z Brassica rapa HOM05D005627 ORTHO05D013519 8.5e-06 56.2 88 33.0


User provided reference genes

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