Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g20688 Brassica carinata HOM05D002664 ORTHO05D032053 3.0e-38 161.4 82 100.0
BolC9t56941H Brassica oleracea HOM05D002664 ORTHO05D032053 4.3e-37 157.5 80 100.0
C09p40590 Brassica napus HOM05D002664 ORTHO05D032053 1.4e-27 125.9 63 100.0
Sp6g13520 Schrenkiella parvula HOM05D002664 ORTHO05D002974 8.4e-17 90.1 85 63.5
BcaB08g35490 Brassica carinata HOM05D002664 ORTHO05D002974 1.4e-16 89.4 83 65.1
CARHR264080 Cardamine hirsuta HOM05D002664 ORTHO05D002974 6.0e-15 84.0 85 60.0
C02p20490 Brassica napus HOM05D002664 ORTHO05D002974 1.3e-14 82.8 81 61.7
BolC2t08185H Brassica oleracea HOM05D002664 ORTHO05D002974 1.3e-14 82.8 81 61.7
BcaB05g24009 Brassica carinata HOM05D002664 ORTHO05D002974 1.8e-14 82.4 81 61.7
Thhalv10015731m.g Eutrema salsugineum HOM05D002664 ORTHO05D002974 3.0e-14 81.6 80 62.5
AT5G51330 Arabidopsis thaliana HOM05D002664 ORTHO05D002974 6.7e-14 80.5 85 57.6
A02p12360 Brassica napus HOM05D002664 ORTHO05D002974 1.9e-13 79.0 76 63.2
BraA02t06302Z Brassica rapa HOM05D002664 ORTHO05D002974 1.9e-13 79.0 76 63.2
BcaC03g14612 Brassica carinata HOM05D002664 ORTHO05D002974 4.3e-13 77.8 82 59.8
AL8G25590 Arabidopsis lyrata HOM05D002664 ORTHO05D002974 7.4e-13 77.0 85 56.5
Aa31LG3G7820 Aethionema arabicum HOM05D002664 ORTHO05D002974 9.6e-13 76.6 67 62.7
Carub.0008s1135 Capsella rubella HOM05D002664 ORTHO05D002974 2.1e-12 75.5 80 56.2
A10p09070 Brassica napus HOM05D002664 ORTHO05D002974 1.2e-10 69.7 57 66.7
THA.LOC104811530 Tarenaya hassleriana HOM05D002664 ORTHO05D002974 1.3e-09 66.2 72 56.9
Sed0006781 Sechium edule HOM05D002664 ORTHO05D002974 3.0e-06 55.1 47 66.0
Gohir.A07G042500 Gossypium hirsutum HOM05D002664 ORTHO05D002974 6.7e-06 53.9 47 57.4
Gohir.D07G046800 Gossypium hirsutum HOM05D002664 ORTHO05D002974 6.7e-06 53.9 47 57.4
Gorai.001G049900 Gossypium raimondii HOM05D002664 ORTHO05D002974 6.7e-06 53.9 47 57.4


User provided reference genes

Program Settings