Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g20651 Brassica carinata HOM05D012501 ORTHO05D014958 6.4e-143 510.8 262 100.0
BraA01t01296Z Brassica rapa HOM05D012501 ORTHO05D014958 4.1e-97 358.6 280 68.6
A08p31640 Brassica napus HOM05D012501 ORTHO05D014958 7.2e-86 321.2 262 66.8
A10p26130 Brassica napus HOM05D012501 ORTHO05D014958 7.2e-86 321.2 262 66.8
BcaB06g27452 Brassica carinata HOM05D012501 ORTHO05D014958 1.7e-82 310.1 246 69.1
BcaB07g31202 Brassica carinata HOM05D012501 ORTHO05D014958 8.8e-76 287.7 251 64.9
C09p40990 Brassica napus HOM05D012501 ORTHO05D014958 3.7e-74 282.3 199 75.9
BolC9t56980H Brassica oleracea HOM05D012501 ORTHO05D014958 2.9e-55 219.5 119 88.2
A06p33420 Brassica napus HOM05D012501 ORTHO05D014958 4.0e-52 209.1 180 65.6
C09p21780 Brassica napus HOM05D000496 ORTHO05D000411 2.0e-40 170.2 123 74.8
BraA06t25235Z Brassica rapa HOM05D000179 ORTHO05D000107 1.7e-26 124.0 124 51.6
A10p29510 Brassica napus HOM05D012501 ORTHO05D014958 9.2e-25 118.2 67 82.1
A05p10270 Brassica napus HOM05D012501 ORTHO05D014958 2.1e-21 107.1 64 85.9
Sp1g33710 Schrenkiella parvula HOM05D012501 ORTHO05D014958 1.8e-20 104.0 214 33.6
THA.LOC104819338 Tarenaya hassleriana HOM05D004230 ORTHO05D014126 1.7e-07 60.8 202 24.8
BraA05t19380Z Brassica rapa HOM05D012682 ORTHO05D014126 3.9e-07 59.7 36 75.0


User provided reference genes

Program Settings