Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g20562 Brassica carinata HOM05D006289 ORTHO05D016037 7.7e-184 647.1 354 100.0
BraA04t16495Z Brassica rapa HOM05D006289 ORTHO05D016037 2.7e-128 462.6 450 65.3
A01p24510 Brassica napus HOM05D006289 ORTHO05D016037 3.0e-111 406.0 370 61.4
C07p15540 Brassica napus HOM05D006289 ORTHO05D016037 5.0e-90 335.5 445 46.3
BraA03t09393Z Brassica rapa HOM05D006289 ORTHO05D016037 2.7e-88 329.7 446 45.5
BcaC06g35485 Brassica carinata HOM05D006289 ORTHO05D016037 1.3e-85 320.9 413 47.5
C09p42080 Brassica napus HOM05D006289 ORTHO05D016037 3.6e-80 302.8 210 79.0
BcaB02g10844 Brassica carinata HOM05D006289 ORTHO05D016037 3.3e-70 269.6 386 42.0
BolC7t42041H Brassica oleracea HOM05D006289 ORTHO05D016037 5.2e-55 219.2 228 53.5
BolC9t57090H Brassica oleracea HOM05D006289 ORTHO05D016037 2.4e-52 210.3 106 100.0
A10p07450 Brassica napus HOM05D006289 ORTHO05D009842 1.2e-51 208.0 383 35.0
A09p34760 Brassica napus HOM05D006289 ORTHO05D009842 3.3e-49 199.9 379 34.6
BraA07t28814Z Brassica rapa HOM05D006289 ORTHO05D009842 7.3e-49 198.7 399 33.6
A05p27900 Brassica napus HOM05D006289 ORTHO05D009842 9.5e-49 198.4 336 37.5
BraA06t25337Z Brassica rapa HOM05D006289 ORTHO05D009842 6.1e-48 195.7 336 36.6
BcaB04g18139 Brassica carinata HOM05D006289 ORTHO05D009842 1.2e-46 191.4 314 36.6
BolC7t41624H Brassica oleracea HOM05D006289 ORTHO05D027553 9.8e-46 188.3 387 34.6
BcaNung00230 Brassica carinata HOM05D006289 ORTHO05D027553 6.4e-45 185.7 340 36.5
BolC8t48148H Brassica oleracea HOM05D006289 ORTHO05D033772 1.1e-44 184.9 383 33.9
A02p12540 Brassica napus HOM05D006289 ORTHO05D009842 1.9e-44 184.1 320 34.1
BraA10t43450Z Brassica rapa HOM05D006289 ORTHO05D009842 1.9e-44 184.1 320 34.1
BcaB06g28130 Brassica carinata HOM05D006289 ORTHO05D016037 3.0e-42 176.8 173 53.8
A02p27270 Brassica napus HOM05D006289 ORTHO05D040814 1.9e-41 174.1 422 31.5
BraA02t07752Z Brassica rapa HOM05D006289 ORTHO05D040814 1.9e-41 174.1 422 31.5
BraA05t21307Z Brassica rapa HOM05D006289 ORTHO05D009842 3.3e-41 173.3 416 30.3
A05p28230 Brassica napus HOM05D006289 ORTHO05D009842 7.3e-41 172.2 424 29.5
BraA05t21704Z Brassica rapa HOM05D006289 ORTHO05D009842 7.3e-41 172.2 424 29.5
A05p20430 Brassica napus HOM05D006289 ORTHO05D009842 6.2e-40 169.1 301 36.2
A01p23190 Brassica napus HOM05D006289 ORTHO05D033772 3.1e-39 166.8 320 33.8
BraA01t02228Z Brassica rapa HOM05D006289 ORTHO05D033772 3.1e-39 166.8 320 33.8
C01p21290 Brassica napus HOM05D006289 ORTHO05D009842 8.3e-37 158.7 375 32.5
A07p02750 Brassica napus HOM05D006289 ORTHO05D009842 1.1e-36 158.3 213 40.4
C07p21860 Brassica napus HOM05D006289 ORTHO05D009842 1.6e-35 154.5 229 38.0
A05p23770 Brassica napus HOM05D006289 ORTHO05D042070 4.0e-31 139.8 274 33.9
BraA05t21247Z Brassica rapa HOM05D006289 ORTHO05D042070 4.0e-31 139.8 274 33.9
BolC5t30494H Brassica oleracea HOM05D006289 ORTHO05D009842 2.3e-26 124.0 95 55.8
BraA02t08686Z Brassica rapa HOM05D000042 ORTHO05D033718 5.1e-26 122.9 276 34.8
BcaB01g01613 Brassica carinata HOM05D006289 ORTHO05D009842 6.6e-26 122.5 140 50.0
BraA10t42593Z Brassica rapa HOM05D006289 ORTHO05D009842 1.5e-25 121.3 95 50.5
A02p36990 Brassica napus HOM05D000042 ORTHO05D033718 1.9e-25 120.9 246 36.2
A08p09530 Brassica napus HOM05D006289 ORTHO05D019882 7.3e-25 119.0 181 40.3
A04p16270 Brassica napus HOM05D006289 ORTHO05D019882 3.6e-24 116.7 306 31.4
A09p06670 Brassica napus HOM05D006289 ORTHO05D009842 6.2e-24 115.9 95 51.6
BcaB01g01204 Brassica carinata HOM05D006289 ORTHO05D019882 2.4e-23 114.0 221 35.3
BcaC09g49041 Brassica carinata HOM05D006289 ORTHO05D032439 2.0e-22 110.9 342 29.2
C06p10550 Brassica napus HOM05D006289 ORTHO05D027553 7.6e-22 109.0 235 34.5
C01p21880 Brassica napus HOM05D067568 ORTHO05D040668 3.8e-21 106.7 99 56.6
BolC1t02115H Brassica oleracea HOM05D067568 ORTHO05D040668 4.9e-21 106.3 99 56.6
BraA04t17266Z Brassica rapa HOM05D006289 ORTHO05D019882 5.4e-20 102.8 193 36.8
BraA07t28074Z Brassica rapa HOM05D006289 ORTHO05D009842 1.5e-17 94.7 192 33.3
C02p52110 Brassica napus HOM05D005627 ORTHO05D040212 2.4e-15 87.4 95 37.9
BolC2t11295H Brassica oleracea HOM05D005627 ORTHO05D040212 2.4e-15 87.4 95 37.9
BcaB08g34566 Brassica carinata HOM05D005627 ORTHO05D009842 4.0e-15 86.7 181 26.0
C02p24040 Brassica napus HOM05D006289 ORTHO05D009842 5.3e-15 86.3 279 27.2
BcaB02g10993 Brassica carinata HOM05D005627 ORTHO05D013519 9.0e-15 85.5 158 31.6
C06p38200 Brassica napus HOM05D005627 ORTHO05D011976 9.0e-15 85.5 202 23.8
A07p02760 Brassica napus HOM05D005627 ORTHO05D028293 2.0e-14 84.3 164 31.1
A05p13630 Brassica napus HOM05D006289 ORTHO05D027692 2.6e-14 84.0 317 27.1
BraA04t16529Z Brassica rapa HOM05D015892 ORTHO05D009842 2.6e-14 84.0 95 35.8
BolC9t55516H Brassica oleracea HOM05D005627 ORTHO05D013519 3.4e-14 83.6 135 34.8
C07p12180 Brassica napus HOM05D005627 ORTHO05D011976 4.4e-14 83.2 202 23.8
C09p37890 Brassica napus HOM05D013280 ORTHO05D011792 4.4e-14 83.2 182 29.1
BcaB04g18138 Brassica carinata HOM05D005627 ORTHO05D013519 5.8e-14 82.8 91 42.9
BolC6t38917H Brassica oleracea HOM05D005627 ORTHO05D013519 5.8e-14 82.8 135 32.6
BolC7t41413H Brassica oleracea HOM05D005627 ORTHO05D011976 5.8e-14 82.8 202 23.3
BcaC02g11662 Brassica carinata HOM05D005627 ORTHO05D011792 7.6e-14 82.4 214 26.2
BcaC08g47004 Brassica carinata HOM05D005627 ORTHO05D019933 9.9e-14 82.0 95 34.7
C06p06910 Brassica napus HOM05D005627 ORTHO05D013519 9.9e-14 82.0 91 41.8
BraA05t20302Z Brassica rapa HOM05D006289 ORTHO05D027692 9.9e-14 82.0 311 27.3
C04p12610 Brassica napus HOM05D005627 ORTHO05D011792 2.2e-13 80.9 213 23.9
C07p12150 Brassica napus HOM05D005627 ORTHO05D011976 2.2e-13 80.9 202 23.3
BcaC05g27915 Brassica carinata HOM05D005627 ORTHO05D011792 2.9e-13 80.5 172 27.3
BcaC08g45148 Brassica carinata HOM05D008384 ORTHO05D009842 2.9e-13 80.5 93 40.9
C01p40360 Brassica napus HOM05D008384 ORTHO05D009842 2.9e-13 80.5 93 35.5
BcaC01g03468 Brassica carinata HOM05D008384 ORTHO05D009842 3.8e-13 80.1 95 34.7
BolC2t07876H Brassica oleracea HOM05D008384 ORTHO05D009842 3.8e-13 80.1 93 38.7
BcaB04g19628 Brassica carinata HOM05D005627 ORTHO05D017564 4.9e-13 79.7 95 35.8
C09p30140 Brassica napus HOM05D005627 ORTHO05D042654 4.9e-13 79.7 89 34.8
C05p36670 Brassica napus HOM05D008838 ORTHO05D017578 6.4e-13 79.3 162 33.3
C06p00830 Brassica napus HOM05D008384 ORTHO05D009842 6.4e-13 79.3 95 33.7
A05p27890 Brassica napus HOM05D005627 ORTHO05D028293 8.4e-13 79.0 164 29.3
C07p12160 Brassica napus HOM05D005627 ORTHO05D013519 8.4e-13 79.0 91 39.6
BraA05t20012Z Brassica rapa HOM05D005627 ORTHO05D021730 8.4e-13 79.0 180 25.0
BcaB01g00831 Brassica carinata HOM05D005627 ORTHO05D009842 1.1e-12 78.6 105 35.2
BcaC05g27687 Brassica carinata HOM05D005627 ORTHO05D021837 1.1e-12 78.6 91 42.9
C03p31500 Brassica napus HOM05D015892 ORTHO05D009842 1.4e-12 78.2 95 32.6
BcaB04g19296 Brassica carinata HOM05D006289 ORTHO05D017564 1.9e-12 77.8 95 35.8
BolC7t41682H Brassica oleracea HOM05D005627 ORTHO05D011976 2.4e-12 77.4 209 23.4
C05p48960 Brassica napus HOM05D008838 ORTHO05D017578 3.2e-12 77.0 91 42.9
BcaB01g00118 Brassica carinata HOM05D005627 ORTHO05D009842 5.4e-12 76.3 181 23.2
A10p17400 Brassica napus HOM05D008838 ORTHO05D028150 5.4e-12 76.3 95 40.0
BolC2t11294H Brassica oleracea HOM05D006289 ORTHO05D002086 5.4e-12 76.3 95 33.7
BolC7t41687H Brassica oleracea HOM05D005627 ORTHO05D013519 5.4e-12 76.3 135 31.9
BcaB01g01914 Brassica carinata HOM05D005627 ORTHO05D009842 9.3e-12 75.5 233 27.5
C07p12190 Brassica napus HOM05D005627 ORTHO05D013519 9.3e-12 75.5 135 31.9
BolC8t49548H Brassica oleracea HOM05D008838 ORTHO05D011792 9.3e-12 75.5 91 37.4
A07p31520 Brassica napus HOM05D008838 ORTHO05D028150 1.6e-11 74.7 95 40.0
C04p42370 Brassica napus HOM05D015892 ORTHO05D009842 1.6e-11 74.7 93 33.3
BraSC36t46060Z Brassica rapa HOM05D005627 ORTHO05D042212 2.1e-11 74.3 164 25.0
BcaB03g16259 Brassica carinata HOM05D005627 ORTHO05D021730 2.7e-11 73.9 214 23.8
BcaB01g01859 Brassica carinata HOM05D005627 ORTHO05D013519 3.5e-11 73.6 155 28.4
BcaB07g31665 Brassica carinata HOM05D008384 ORTHO05D009842 3.5e-11 73.6 93 36.6
C07p35890 Brassica napus HOM05D008384 ORTHO05D016044 3.5e-11 73.6 93 35.5
BcaB07g30175 Brassica carinata HOM05D005627 ORTHO05D019933 4.6e-11 73.2 95 32.6
BcaC01g04977 Brassica carinata HOM05D015892 ORTHO05D009842 4.6e-11 73.2 103 30.1
BcaC05g27033 Brassica carinata HOM05D005627 ORTHO05D031886 4.6e-11 73.2 95 30.5
A09p28380 Brassica napus HOM05D005627 ORTHO05D021730 4.6e-11 73.2 180 25.0
C05p28910 Brassica napus HOM05D005627 ORTHO05D031886 4.6e-11 73.2 95 30.5
BolC5t31612H Brassica oleracea HOM05D005627 ORTHO05D031886 4.6e-11 73.2 95 30.5
BolC7t41683H Brassica oleracea HOM05D005627 ORTHO05D013519 4.6e-11 73.2 135 31.1
A04p11360 Brassica napus HOM05D005627 ORTHO05D019933 7.8e-11 72.4 249 26.9
BolC9t58939H Brassica oleracea HOM05D008838 ORTHO05D011792 7.8e-11 72.4 91 38.5
BraA04t16798Z Brassica rapa HOM05D005627 ORTHO05D019933 7.8e-11 72.4 249 26.9
BcaB05g22096 Brassica carinata HOM05D009418 ORTHO05D011792 1.0e-10 72.0 220 25.9
BcaB05g24894 Brassica carinata HOM05D008384 ORTHO05D009842 1.0e-10 72.0 89 33.7
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 1.0e-10 72.0 91 35.2
BraA01t02229Z Brassica rapa HOM05D005627 ORTHO05D013519 1.0e-10 72.0 91 35.2
BcaC05g27914 Brassica carinata HOM05D005627 ORTHO05D011792 1.3e-10 71.6 172 25.6
A06p10200 Brassica napus HOM05D006289 ORTHO05D019882 2.3e-10 70.9 189 30.2
BcaB01g04195 Brassica carinata HOM05D009418 ORTHO05D018626 3.0e-10 70.5 220 25.5
BcaB03g15637 Brassica carinata HOM05D009418 ORTHO05D027366 3.0e-10 70.5 183 25.7
BcaC08g44143 Brassica carinata HOM05D008838 ORTHO05D011792 3.0e-10 70.5 91 36.3
BcaB05g23054 Brassica carinata HOM05D005627 ORTHO05D011792 3.9e-10 70.1 95 33.7
A03p31870 Brassica napus HOM05D005627 ORTHO05D027884 3.9e-10 70.1 93 38.7
A03p51090 Brassica napus HOM05D008838 ORTHO05D039997 3.9e-10 70.1 93 38.7
A09p28360 Brassica napus HOM05D006289 ORTHO05D027118 3.9e-10 70.1 223 25.1
BolC7t41685H Brassica oleracea HOM05D005627 ORTHO05D011976 5.1e-10 69.7 202 22.3
BraA06t24543Z Brassica rapa HOM05D005627 ORTHO05D027884 5.1e-10 69.7 93 38.7
BcaC04g19885 Brassica carinata HOM05D005627 ORTHO05D017564 6.6e-10 69.3 91 33.0
BcaC06g36127 Brassica carinata HOM05D013280 ORTHO05D011792 8.7e-10 68.9 214 23.8
BcaC08g46979 Brassica carinata HOM05D005627 ORTHO05D019933 8.7e-10 68.9 95 31.6
C07p60290 Brassica napus HOM05D015892 ORTHO05D009842 8.7e-10 68.9 88 29.5
BraA05t20010Z Brassica rapa HOM05D006289 ORTHO05D028190 8.7e-10 68.9 183 25.1
BcaC06g36744 Brassica carinata HOM05D008838 ORTHO05D011792 1.1e-09 68.6 91 37.4
C01p43240 Brassica napus HOM05D006289 ORTHO05D032439 1.1e-09 68.6 117 36.8
BraA02t06823Z Brassica rapa HOM05D005627 ORTHO05D011792 1.1e-09 68.6 213 25.4
BraA02t08906Z Brassica rapa HOM05D005627 ORTHO05D019933 1.1e-09 68.6 249 26.1
BraA08t32951Z Brassica rapa HOM05D006289 ORTHO05D019882 1.1e-09 68.6 69 50.7
A03p68400 Brassica napus HOM05D005627 ORTHO05D017564 1.5e-09 68.2 95 30.5
BraA09t41982Z Brassica rapa HOM05D005627 ORTHO05D011792 1.5e-09 68.2 214 25.2
C02p45490 Brassica napus HOM05D006289 ORTHO05D039115 1.9e-09 67.8 95 32.6
BolC1t04288H Brassica oleracea HOM05D006289 ORTHO05D032439 1.9e-09 67.8 211 29.4
BraA01t02617Z Brassica rapa HOM05D005627 ORTHO05D017564 1.9e-09 67.8 95 30.5
SpUn0001_0070 Schrenkiella parvula HOM05D008384 ORTHO05D009842 1.9e-09 67.8 108 31.5
BcaB03g14887 Brassica carinata HOM05D008384 ORTHO05D009842 2.5e-09 67.4 89 33.7
BcaB04g17275 Brassica carinata HOM05D006289 ORTHO05D019882 2.5e-09 67.4 223 28.7
BcaC05g27035 Brassica carinata HOM05D006289 ORTHO05D032057 2.5e-09 67.4 95 33.7
C05p28920 Brassica napus HOM05D006289 ORTHO05D032057 2.5e-09 67.4 95 33.7
BolC5t31614H Brassica oleracea HOM05D006289 ORTHO05D032057 2.5e-09 67.4 95 33.7
BolC9t59378H Brassica oleracea HOM05D006289 ORTHO05D017568 2.5e-09 67.4 182 24.2
BcaC04g19240 Brassica carinata HOM05D006289 ORTHO05D017568 3.3e-09 67.0 182 24.7
C07p34790 Brassica napus HOM05D008838 ORTHO05D028150 3.3e-09 67.0 95 36.8
BolC3t18952H Brassica oleracea HOM05D006289 ORTHO05D017568 3.3e-09 67.0 182 25.3
BcaB01g01127 Brassica carinata HOM05D006289 ORTHO05D017564 4.3e-09 66.6 95 30.5
BcaB04g17340 Brassica carinata HOM05D009418 ORTHO05D009842 4.3e-09 66.6 229 21.8
BolC7t44007H Brassica oleracea HOM05D005627 ORTHO05D028150 4.3e-09 66.6 95 35.8
BraA04t18509Z Brassica rapa HOM05D005627 ORTHO05D021837 5.6e-09 66.2 92 34.8
BcaC06g34913 Brassica carinata HOM05D006289 ORTHO05D009842 7.3e-09 65.9 132 37.1
BraA10t43452Z Brassica rapa HOM05D001038 ORTHO05D019929 9.6e-09 65.5 141 27.7
Sp4g09860 Schrenkiella parvula HOM05D005627 ORTHO05D011792 1.3e-08 65.1 130 26.9
C09p39670 Brassica napus HOM05D005627 ORTHO05D021730 1.6e-08 64.7 162 25.3
BolC9t56847H Brassica oleracea HOM05D005627 ORTHO05D021730 1.6e-08 64.7 162 25.3
BcaC04g23075 Brassica carinata HOM05D006289 ORTHO05D032198 2.1e-08 64.3 83 41.0
C01p43410 Brassica napus HOM05D006289 ORTHO05D017568 2.1e-08 64.3 182 24.7
C06p20900 Brassica napus HOM05D005627 ORTHO05D013519 2.8e-08 63.9 135 27.4
BcaC05g24337 Brassica carinata HOM05D009418 ORTHO05D011792 3.6e-08 63.5 351 21.7
C03p66840 Brassica napus HOM05D006289 ORTHO05D017568 3.6e-08 63.5 182 24.7
BNapus_Darmor_BZH_scaffold_103p00100 Brassica napus HOM05D005627 ORTHO05D017564 4.8e-08 63.2 95 30.5
BNapus_Darmor_BZH_scaffold_104p00110 Brassica napus HOM05D005627 ORTHO05D017564 4.8e-08 63.2 95 30.5
BraA09t36744Z Brassica rapa HOM05D006289 ORTHO05D009842 4.8e-08 63.2 57 47.4
BraSC36t46108Z Brassica rapa HOM05D005627 ORTHO05D017564 4.8e-08 63.2 95 30.5
C04p40320 Brassica napus HOM05D009418 ORTHO05D018626 6.2e-08 62.8 162 24.1
BcaC08g44443 Brassica carinata HOM05D008838 ORTHO05D017578 8.1e-08 62.4 63 47.6
BolC4t22910H Brassica oleracea HOM05D005627 ORTHO05D011792 8.1e-08 62.4 214 24.3
BolC6t36135H Brassica oleracea HOM05D006289 ORTHO05D009842 8.1e-08 62.4 56 46.4
C03p74240 Brassica napus HOM05D006289 ORTHO05D028190 1.1e-07 62.0 95 31.6
C09p65560 Brassica napus HOM05D006289 ORTHO05D017568 1.1e-07 62.0 94 31.9
BolC3t19682H Brassica oleracea HOM05D006289 ORTHO05D028190 1.1e-07 62.0 95 31.6
BolC9t56622H Brassica oleracea HOM05D013280 ORTHO05D011792 1.1e-07 62.0 141 30.5
C02p52100 Brassica napus HOM05D007462 ORTHO05D002086 1.4e-07 61.6 74 35.1
BcaC03g14591 Brassica carinata HOM05D008384 ORTHO05D009842 2.4e-07 60.8 62 40.3
BraA04t18196Z Brassica rapa HOM05D005627 ORTHO05D027884 2.4e-07 60.8 79 40.5
BraA07t28776Z Brassica rapa HOM05D005627 ORTHO05D017568 2.4e-07 60.8 95 31.6
BolC5t33636H Brassica oleracea HOM05D008838 ORTHO05D021837 3.1e-07 60.5 75 42.7
BcaB01g01529 Brassica carinata HOM05D008384 ORTHO05D009842 4.0e-07 60.1 74 35.1
BcaB01g01826 Brassica carinata HOM05D009418 ORTHO05D092826 4.0e-07 60.1 89 29.2
BcaB04g17765 Brassica carinata HOM05D006289 ORTHO05D039283 4.0e-07 60.1 67 52.2
BcaB05g23251 Brassica carinata HOM05D005627 ORTHO05D009842 4.0e-07 60.1 80 33.8
BcaB05g23461 Brassica carinata HOM05D009418 ORTHO05D011792 4.0e-07 60.1 93 31.2
C07p07500 Brassica napus HOM05D013280 ORTHO05D011792 5.3e-07 59.7 185 25.9
C07p09750 Brassica napus HOM05D005627 ORTHO05D011976 1.5e-06 58.2 301 22.6
BolC5t32399H Brassica oleracea HOM05D008838 ORTHO05D021837 2.0e-06 57.8 75 40.0
C06p18890 Brassica napus HOM05D008838 ORTHO05D017578 3.4e-06 57.0 52 50.0
BcaC02g07853 Brassica carinata HOM05D009418 ORTHO05D002311 4.5e-06 56.6 111 27.0
BcaC01g03623 Brassica carinata HOM05D009418 ORTHO05D018626 5.8e-06 56.2 163 23.3
C04p58410 Brassica napus HOM05D009418 ORTHO05D017574 7.6e-06 55.8 138 30.4
BolC7t41649H Brassica oleracea HOM05D005627 ORTHO05D027884 7.6e-06 55.8 95 31.6
C03p10840 Brassica napus HOM05D009590 ORTHO05D100504 9.9e-06 55.5 92 30.4


User provided reference genes

Program Settings