Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g20530 Brassica carinata HOM05D000429 ORTHO05D039777 6.6e-79 297.4 155 100.0
BolC4t25024H Brassica oleracea HOM05D000429 ORTHO05D039777 1.4e-57 226.5 135 87.4
BcaC03g16528 Brassica carinata HOM05D000429 ORTHO05D000352 3.5e-40 168.7 155 58.1
BcaC03g17372 Brassica carinata HOM05D000429 ORTHO05D000352 1.7e-39 166.4 153 60.1
BcaC05g27434 Brassica carinata HOM05D000429 ORTHO05D000352 2.1e-37 159.5 154 56.5
BcaC05g27557 Brassica carinata HOM05D000429 ORTHO05D000352 1.3e-26 123.6 135 50.4
BcaC05g26846 Brassica carinata HOM05D000429 ORTHO05D000352 6.5e-26 121.3 169 45.0
BcaC08g43873 Brassica carinata HOM05D000429 ORTHO05D000352 8.7e-23 110.9 84 64.3
BcaC05g27405 Brassica carinata HOM05D000429 ORTHO05D000352 7.4e-22 107.8 95 57.9
BcaC04g19799 Brassica carinata HOM05D000429 ORTHO05D000352 3.2e-17 92.4 81 58.0
BcaC06g35018 Brassica carinata HOM05D008499 ORTHO05D000352 5.3e-12 75.1 86 41.9
BcaC07g38208 Brassica carinata HOM05D000429 ORTHO05D000352 1.2e-11 73.9 91 38.5
BcaC04g21664 Brassica carinata HOM05D000429 ORTHO05D000352 2.9e-10 69.3 91 37.4
Oeu058894.1 Olea europaea HOM05D000047 ORTHO05D008058 3.6e-08 62.4 86 39.5
BcaB07g33706 Brassica carinata HOM05D008499 ORTHO05D000352 1.0e-07 60.8 52 51.9
vmacro12970 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 2.3e-07 59.7 103 31.1
BcaC08g43699 Brassica carinata HOM05D008499 ORTHO05D000352 3.0e-07 59.3 52 48.1
BcaB07g33035 Brassica carinata HOM05D008499 ORTHO05D000352 5.1e-07 58.5 50 50.0
BcaC03g16703 Brassica carinata HOM05D008499 ORTHO05D000352 6.7e-07 58.2 55 47.3
Ciclev10033470m.g Citrus clementina HOM05D000429 ORTHO05D000352 6.7e-07 58.2 88 33.0
BraA05t21056Z Brassica rapa HOM05D008467 ORTHO05D013801 8.8e-07 57.8 95 35.8
A06p24370 Brassica napus HOM05D008467 ORTHO05D000352 1.1e-06 57.4 86 36.0
HanXRQChr10g0279851 Helianthus annuus HOM05D000047 ORTHO05D000044 1.1e-06 57.4 86 33.7
MBI07_g06422_MAGBIO Magnolia biondii HOM05D001436 ORTHO05D000880 1.1e-06 57.4 86 37.2
Oeu014370.1 Olea europaea HOM05D000429 ORTHO05D000352 1.1e-06 57.4 101 28.7
BcaC08g44206 Brassica carinata HOM05D008499 ORTHO05D000352 1.5e-06 57.0 44 59.1
Oeu033863.1 Olea europaea HOM05D000429 ORTHO05D000352 1.5e-06 57.0 89 38.2
TWI77G0969 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.5e-06 57.0 88 33.0
BolC8t48391H Brassica oleracea HOM05D009992 ORTHO05D012072 2.0e-06 56.6 87 33.3
Oeu037482.1 Olea europaea HOM05D000429 ORTHO05D000352 2.0e-06 56.6 86 38.4
Oeu064691.1 Olea europaea HOM05D000429 ORTHO05D000352 2.0e-06 56.6 89 38.2
QL07p045945 Quercus lobata HOM05D000047 ORTHO05D000044 2.0e-06 56.6 87 29.9
CANSAT25G3092 Cannabis sativa HOM05D000429 ORTHO05D000352 2.5e-06 56.2 82 35.4
Oeu010062.1 Olea europaea HOM05D000429 ORTHO05D000352 2.5e-06 56.2 89 38.2
QL03p039823 Quercus lobata HOM05D000047 ORTHO05D000044 2.5e-06 56.2 83 34.9
vmacro12124 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 2.5e-06 56.2 93 30.1
HanXRQChr05g0143021 Helianthus annuus HOM05D000047 ORTHO05D000044 3.3e-06 55.8 86 31.4
CANSAT54G2683 Cannabis sativa HOM05D000429 ORTHO05D000352 4.3e-06 55.5 85 40.0
Oeu057937.1 Olea europaea HOM05D000429 ORTHO05D000352 4.3e-06 55.5 86 36.0
Oeu064652.1 Olea europaea HOM05D000429 ORTHO05D000352 4.3e-06 55.5 86 38.4
QL05p030578 Quercus lobata HOM05D000047 ORTHO05D000044 4.3e-06 55.5 83 32.5
CANSAT01G3170 Cannabis sativa HOM05D000429 ORTHO05D000352 5.7e-06 55.1 87 34.5
BolC5t30966H Brassica oleracea HOM05D000429 ORTHO05D000352 7.4e-06 54.7 37 70.3
CANSAT35G1210 Cannabis sativa HOM05D000429 ORTHO05D000352 7.4e-06 54.7 103 33.0
Manes.10G076111 Manihot esculenta HOM05D000047 ORTHO05D000352 7.4e-06 54.7 101 31.7
Oeu033810.1 Olea europaea HOM05D000429 ORTHO05D000352 7.4e-06 54.7 86 37.2
QL93p0205_0258 Quercus lobata HOM05D000047 ORTHO05D000044 7.4e-06 54.7 90 31.1
Sp7g08560 Schrenkiella parvula HOM05D017647 ORTHO05D011337 7.4e-06 54.7 132 29.5
TWI18G0663 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 7.4e-06 54.7 84 33.3
CANSAT01G2744 Cannabis sativa HOM05D000429 ORTHO05D000352 9.7e-06 54.3 82 34.1
CANSAT35G1581 Cannabis sativa HOM05D000429 ORTHO05D000352 9.7e-06 54.3 82 35.4
ECA236G3431 Erigeron canadensis HOM05D000047 ORTHO05D000044 9.7e-06 54.3 141 29.1


User provided reference genes

Program Settings