Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g20336 Brassica carinata HOM05D000935 ORTHO05D009979 6.0e-25 116.7 59 100.0
BolC9t57352H Brassica oleracea HOM05D000935 ORTHO05D009979 1.1e-15 85.9 48 89.6
C06p35860 Brassica napus HOM05D000935 ORTHO05D009979 1.3e-14 82.4 45 88.9
C01p20790 Brassica napus HOM05D000935 ORTHO05D009979 2.2e-14 81.6 45 91.1
BcaC01g00953 Brassica carinata HOM05D000935 ORTHO05D009979 2.8e-14 81.3 47 87.2
C02p41130 Brassica napus HOM05D000935 ORTHO05D009979 2.8e-14 81.3 47 87.2
C07p53220 Brassica napus HOM05D000935 ORTHO05D009979 2.8e-14 81.3 47 87.2
C09p12190 Brassica napus HOM05D000935 ORTHO05D009979 2.8e-14 81.3 47 87.2
BolC3t19050H Brassica oleracea HOM05D000935 ORTHO05D009979 2.8e-14 81.3 47 87.2
BolC3t20921H Brassica oleracea HOM05D000935 ORTHO05D009979 2.8e-14 81.3 47 87.2
C03p68240 Brassica napus HOM05D000935 ORTHO05D009979 3.7e-14 80.9 48 85.4
C03p73610 Brassica napus HOM05D000935 ORTHO05D009979 3.7e-14 80.9 48 85.4
C03p86300 Brassica napus HOM05D000935 ORTHO05D009979 3.7e-14 80.9 48 85.4
C04p21050 Brassica napus HOM05D000935 ORTHO05D009979 3.7e-14 80.9 48 85.4
BolC3t17661H Brassica oleracea HOM05D000935 ORTHO05D010096 3.7e-14 80.9 48 85.4
BolC4t23630H Brassica oleracea HOM05D000935 ORTHO05D010820 3.7e-14 80.9 48 85.4
BolC7t45817H Brassica oleracea HOM05D000935 ORTHO05D009979 3.7e-14 80.9 48 85.4
BolC9t58593H Brassica oleracea HOM05D000935 ORTHO05D009979 3.7e-14 80.9 48 85.4
C03p45260 Brassica napus HOM05D000935 ORTHO05D009979 4.8e-14 80.5 48 83.3
C05p15390 Brassica napus HOM05D000935 ORTHO05D009979 4.8e-14 80.5 48 83.3
BolC3t16789H Brassica oleracea HOM05D000935 ORTHO05D010820 4.8e-14 80.5 48 83.3
BolC5t30568H Brassica oleracea HOM05D000935 ORTHO05D009979 4.8e-14 80.5 48 85.4
C03p29260 Brassica napus HOM05D000935 ORTHO05D009979 6.3e-14 80.1 47 85.1
C05p06150 Brassica napus HOM05D000935 ORTHO05D009979 6.3e-14 80.1 45 88.9
BolC7t42585H Brassica oleracea HOM05D000935 ORTHO05D009979 6.3e-14 80.1 47 85.1
BcaC01g06322 Brassica carinata HOM05D000935 ORTHO05D009979 8.2e-14 79.7 46 87.0
C02p39360 Brassica napus HOM05D000935 ORTHO05D009979 8.2e-14 79.7 47 85.1
C02p49460 Brassica napus HOM05D000935 ORTHO05D009979 8.2e-14 79.7 47 85.1
C07p20550 Brassica napus HOM05D000935 ORTHO05D009979 8.2e-14 79.7 48 83.3
C09p44780 Brassica napus HOM05D000935 ORTHO05D009979 8.2e-14 79.7 44 90.9
BolC2t09946H Brassica oleracea HOM05D000935 ORTHO05D009979 8.2e-14 79.7 47 85.1
BolC2t10125H Brassica oleracea HOM05D000935 ORTHO05D009979 8.2e-14 79.7 44 90.9
C02p15100 Brassica napus HOM05D000935 ORTHO05D009979 1.1e-13 79.3 47 85.1
C02p57270 Brassica napus HOM05D000935 ORTHO05D009979 1.1e-13 79.3 48 83.3
C03p24890 Brassica napus HOM05D000935 ORTHO05D009979 1.1e-13 79.3 48 83.3
C03p35450 Brassica napus HOM05D000935 ORTHO05D009979 1.1e-13 79.3 48 83.3
C09p58690 Brassica napus HOM05D000935 ORTHO05D009979 1.1e-13 79.3 47 85.1
BolC2t09723H Brassica oleracea HOM05D000935 ORTHO05D009979 1.1e-13 79.3 48 83.3
BolC2t11796H Brassica oleracea HOM05D000935 ORTHO05D009979 1.1e-13 79.3 48 83.3
C05p56530 Brassica napus HOM05D000935 ORTHO05D009979 1.4e-13 79.0 48 83.3
C06p44520 Brassica napus HOM05D000935 ORTHO05D009979 1.4e-13 79.0 47 85.1
BolC5t34318H Brassica oleracea HOM05D000935 ORTHO05D009979 1.4e-13 79.0 48 83.3
BolC6t35936H Brassica oleracea HOM05D000935 ORTHO05D010096 1.4e-13 79.0 48 83.3
C02p28160 Brassica napus HOM05D000935 ORTHO05D009979 1.8e-13 78.6 47 85.1
BcaC03g16139 Brassica carinata HOM05D000935 ORTHO05D009979 2.4e-13 78.2 44 88.6
C02p43840 Brassica napus HOM05D000935 ORTHO05D009979 2.4e-13 78.2 44 88.6
C05p49680 Brassica napus HOM05D000935 ORTHO05D010096 2.4e-13 78.2 44 88.6
BolC2t10491H Brassica oleracea HOM05D000935 ORTHO05D009979 2.4e-13 78.2 47 85.1
C04p49060 Brassica napus HOM05D000935 ORTHO05D009979 3.1e-13 77.8 47 83.0
C06p43700 Brassica napus HOM05D000935 ORTHO05D009979 3.1e-13 77.8 47 85.1
BolC1t00230H Brassica oleracea HOM05D000935 ORTHO05D009979 3.1e-13 77.8 47 83.0
C03p43710 Brassica napus HOM05D000935 ORTHO05D009979 4.1e-13 77.4 48 81.2
BolC4t26490H Brassica oleracea HOM05D000935 ORTHO05D009979 4.1e-13 77.4 48 81.2
C09p19580 Brassica napus HOM05D000935 ORTHO05D009979 5.3e-13 77.0 47 85.1
BolC8t46829H Brassica oleracea HOM05D000935 ORTHO05D009979 5.3e-13 77.0 48 81.2
BolC9t54108H Brassica oleracea HOM05D000935 ORTHO05D009979 5.3e-13 77.0 48 83.3
C09p56870 Brassica napus HOM05D009598 ORTHO05D040253 6.9e-13 76.6 48 79.2
C04p40230 Brassica napus HOM05D000935 ORTHO05D009979 9.1e-13 76.3 45 86.7
C09p43690 Brassica napus HOM05D000935 ORTHO05D009979 9.1e-13 76.3 48 81.2
BolC3t14107H Brassica oleracea HOM05D000935 ORTHO05D010096 9.1e-13 76.3 48 81.2
BolC6t38710H Brassica oleracea HOM05D000935 ORTHO05D009979 9.1e-13 76.3 47 80.9
BolC9t57254H Brassica oleracea HOM05D008594 ORTHO05D010096 9.1e-13 76.3 48 81.2
C07p19000 Brassica napus HOM05D000935 ORTHO05D009979 1.2e-12 75.9 44 86.4
BolC3t14516H Brassica oleracea HOM05D000935 ORTHO05D009979 1.2e-12 75.9 48 81.2
BolC7t42410H Brassica oleracea HOM05D000935 ORTHO05D009979 1.2e-12 75.9 44 86.4
C06p04430 Brassica napus HOM05D000935 ORTHO05D009979 1.5e-12 75.5 46 82.6
C08p26920 Brassica napus HOM05D000935 ORTHO05D009979 1.5e-12 75.5 47 80.9
BolC4t25599H Brassica oleracea HOM05D000935 ORTHO05D009979 1.5e-12 75.5 48 81.2
BolC2t08024H Brassica oleracea HOM05D000935 ORTHO05D010820 2.0e-12 75.1 48 79.2
BolC4t27538H Brassica oleracea HOM05D000935 ORTHO05D009979 2.0e-12 75.1 44 84.1
BolC7t43118H Brassica oleracea HOM05D000935 ORTHO05D009979 2.6e-12 74.7 42 90.5
BolC8t47373H Brassica oleracea HOM05D000935 ORTHO05D009979 2.6e-12 74.7 44 84.1
C02p52490 Brassica napus HOM05D000935 ORTHO05D010096 3.4e-12 74.3 48 77.1
C06p32460 Brassica napus HOM05D000935 ORTHO05D009979 4.5e-12 73.9 48 77.1
BolC6t38369H Brassica oleracea HOM05D000935 ORTHO05D009979 4.5e-12 73.9 48 77.1
BolC6t38936H Brassica oleracea HOM05D000935 ORTHO05D010096 4.5e-12 73.9 44 86.4
BolC6t35574H Brassica oleracea HOM05D000935 ORTHO05D009979 5.9e-12 73.6 43 83.7
BolC5t29374H Brassica oleracea HOM05D000935 ORTHO05D010096 7.7e-12 73.2 44 84.1
C02p44460 Brassica napus HOM05D000935 ORTHO05D009979 1.7e-11 72.0 48 77.1
C03p38350 Brassica napus HOM05D000935 ORTHO05D009979 2.9e-11 71.2 48 79.2
BolC3t19654H Brassica oleracea HOM05D000935 ORTHO05D009979 2.9e-11 71.2 41 87.8
C06p08580 Brassica napus HOM05D000935 ORTHO05D009979 3.8e-11 70.9 45 82.2
BolC9t59210H Brassica oleracea HOM05D000935 ORTHO05D009979 5.0e-11 70.5 41 85.4
BolC9t55393H Brassica oleracea HOM05D000935 ORTHO05D010096 6.5e-11 70.1 44 84.1
C04p31050 Brassica napus HOM05D000935 ORTHO05D009979 8.5e-11 69.7 47 78.7
C03p73850 Brassica napus HOM05D000935 ORTHO05D010096 1.1e-10 69.3 40 87.5
C03p74050 Brassica napus HOM05D000935 ORTHO05D010096 1.1e-10 69.3 40 87.5
BolC9t58602H Brassica oleracea HOM05D000935 ORTHO05D010096 1.9e-10 68.6 53 69.8
C03p38410 Brassica napus HOM05D000935 ORTHO05D010096 9.4e-10 66.2 48 75.0
A09p15030 Brassica napus HOM05D000935 ORTHO05D042010 6.1e-09 63.5 48 68.8
BraA09t37148Z Brassica rapa HOM05D000935 ORTHO05D042010 6.1e-09 63.5 48 68.8
BraA09t38816Z Brassica rapa HOM05D000935 ORTHO05D009979 3.9e-08 60.8 46 71.7
C08p06840 Brassica napus HOM05D000280 ORTHO05D003998 2.6e-07 58.2 47 66.0
BolC2t08438H Brassica oleracea HOM05D000935 ORTHO05D106777 3.3e-07 57.8 31 93.5
C01p02400 Brassica napus HOM05D000935 ORTHO05D009979 4.8e-06 53.9 31 87.1
C03p68070 Brassica napus HOM05D000935 ORTHO05D040406 8.2e-06 53.1 46 63.0
BolC3t19030H Brassica oleracea HOM05D000935 ORTHO05D040406 8.2e-06 53.1 46 63.0


User provided reference genes

Program Settings