Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g20329 Brassica carinata HOM05D003841 ORTHO05D004602 1.9e-148 529.3 290 100.0
C09p44880 Brassica napus HOM05D003841 ORTHO05D004602 1.2e-145 520.0 290 98.6
A10p11770 Brassica napus HOM05D003841 ORTHO05D004602 1.7e-144 516.2 290 96.6
BraA10t43276Z Brassica rapa HOM05D003841 ORTHO05D004602 7.1e-143 510.8 294 94.2
BolC9t57359H Brassica oleracea HOM05D003841 ORTHO05D004602 8.6e-141 503.8 305 91.8
BcaB08g35813 Brassica carinata HOM05D003841 ORTHO05D004602 3.0e-133 478.8 294 89.5
C02p16910 Brassica napus HOM05D003841 ORTHO05D004602 4.6e-118 428.3 292 81.5
A02p10210 Brassica napus HOM05D003841 ORTHO05D004602 7.4e-116 421.0 296 79.4
Sp6g16510 Schrenkiella parvula HOM05D003841 ORTHO05D004602 1.0e-109 400.6 301 76.1
BraA02t06092Z Brassica rapa HOM05D003841 ORTHO05D004602 3.0e-109 399.1 296 77.7
Thhalv10014255m.g Eutrema salsugineum HOM05D003841 ORTHO05D004602 3.9e-109 398.7 296 75.3
AL8G29910 Arabidopsis lyrata HOM05D003841 ORTHO05D004602 1.4e-98 363.6 303 69.3
AT5G54540 Arabidopsis thaliana HOM05D003841 ORTHO05D004602 3.8e-96 355.5 304 68.1
BcaB05g22143 Brassica carinata HOM05D003841 ORTHO05D004602 3.6e-94 349.0 285 71.9
CARHR267820 Cardamine hirsuta HOM05D003841 ORTHO05D004602 3.9e-93 345.5 307 66.1
Carub.0008s1482 Capsella rubella HOM05D003841 ORTHO05D004602 2.5e-87 326.2 304 64.1
Aa31LG3G10490 Aethionema arabicum HOM05D003841 ORTHO05D004602 2.7e-70 269.6 318 55.7
THA.LOC104799894 Tarenaya hassleriana HOM05D003841 ORTHO05D004602 4.4e-60 235.7 322 48.1
BolC2t07792H Brassica oleracea HOM05D003841 ORTHO05D004602 2.0e-44 183.7 256 47.3
AUR62029272 Chenopodium quinoa HOM05D003841 ORTHO05D004602 3.2e-34 149.8 303 37.3
BcaC03g14305 Brassica carinata HOM05D003841 ORTHO05D004602 5.4e-34 149.1 219 45.7
CSS0048456 Camellia sinensis var. sinensis HOM05D003841 ORTHO05D004602 5.4e-34 149.1 332 36.7
AUR62041149 Chenopodium quinoa HOM05D003841 ORTHO05D004602 5.4e-34 149.1 304 37.5
Hund23360 Selenicereus undatus HOM05D003841 ORTHO05D004602 1.0e-32 144.8 309 37.5
EL10Ac4g08014 Beta vulgaris HOM05D003841 ORTHO05D004602 5.1e-32 142.5 306 38.2
CiPaw.12G124700 Carya illinoinensis HOM05D003841 ORTHO05D004602 3.3e-31 139.8 309 36.2
Manes.15G079400 Manihot esculenta HOM05D003841 ORTHO05D004602 3.3e-31 139.8 329 38.0
Rhsim06G0190700 Rhododendron simsii HOM05D003841 ORTHO05D004602 5.6e-31 139.0 316 36.1
Potri.001G410100 Populus trichocarpa HOM05D003841 ORTHO05D004602 1.2e-30 137.9 329 37.7
Rhsim06G0189000 Rhododendron simsii HOM05D003841 ORTHO05D004602 2.1e-30 137.1 316 35.8
Dinv02831 Davidia involucrata HOM05D003841 ORTHO05D004602 2.8e-30 136.7 340 36.5
Ciclev10008955m.g Citrus clementina HOM05D003841 ORTHO05D004602 4.7e-30 136.0 328 36.3
Sabra16G0281100 Salix brachista HOM05D003841 ORTHO05D004602 2.3e-29 133.7 336 35.7
Dinv22328 Davidia involucrata HOM05D003841 ORTHO05D004602 4.4e-28 129.4 336 36.9
TPR.G34029 Trifolium pratense HOM05D003841 ORTHO05D004602 7.6e-28 128.6 328 34.1
Potri.011G130000 Populus trichocarpa HOM05D003841 ORTHO05D004602 1.3e-27 127.9 336 35.4
Cc05_g12980 Coffea canephora HOM05D003841 ORTHO05D004602 1.7e-27 127.5 331 35.3
Gohir.A11G281600 Gossypium hirsutum HOM05D003841 ORTHO05D004602 1.7e-27 127.5 322 34.2
Gorai.007G317200 Gossypium raimondii HOM05D003841 ORTHO05D004602 2.9e-27 126.7 321 33.3
CSS0046033 Camellia sinensis var. sinensis HOM05D003841 ORTHO05D004602 3.8e-27 126.3 285 36.5
GSVIVG01014549001 Vitis vinifera HOM05D003841 ORTHO05D004602 3.8e-27 126.3 209 43.1
Gohir.D11G294200 Gossypium hirsutum HOM05D003841 ORTHO05D004602 4.9e-27 125.9 321 33.0
Lalb_Chr01g0006261 Lupinus albus HOM05D003841 ORTHO05D004602 4.9e-27 125.9 319 34.8
TWI39G0875 Tripterygium wilfordii HOM05D003841 ORTHO05D004602 6.4e-27 125.6 343 35.3
COL.COLO4_09535 Corchorus olitorius HOM05D003841 ORTHO05D004602 1.4e-26 124.4 323 32.2
Lj1A861T58 Lonicera japonica HOM05D003841 ORTHO05D004602 1.9e-26 124.0 325 32.9
vmacro11787 Vaccinium macrocarpon HOM05D003841 ORTHO05D004602 2.4e-26 123.6 342 33.6
Glyma.06G262900 Glycine max HOM05D003841 ORTHO05D004602 4.1e-26 122.9 325 31.7
CANSAT11G1059 Cannabis sativa HOM05D003841 ORTHO05D004602 5.4e-26 122.5 302 34.4
Cfa020471 Carpinus fangiana HOM05D003841 ORTHO05D004602 7.1e-26 122.1 312 37.2
Medtr4g081550 Medicago truncatula HOM05D003841 ORTHO05D004602 7.1e-26 122.1 318 33.6
Oeu005438.1 Olea europaea HOM05D003841 ORTHO05D004602 7.1e-26 122.1 341 34.9
RhsimUnG0254800 Rhododendron simsii HOM05D003841 ORTHO05D004602 7.1e-26 122.1 335 36.1
arahy.Tifrunner.gnm1.ann1.SIF99T Arachis hypogaea HOM05D003841 ORTHO05D004602 2.1e-25 120.6 335 33.7
Nitab4.5_0000552g0100 Nicotiana tabacum HOM05D003841 ORTHO05D004602 2.1e-25 120.6 329 35.6
QL08p014515 Quercus lobata HOM05D003841 ORTHO05D004602 2.1e-25 120.6 325 33.5
Duzib213G0276 Durio zibethinus HOM05D003841 ORTHO05D004602 3.5e-25 119.8 321 33.6
TWI38G0390 Tripterygium wilfordii HOM05D003841 ORTHO05D004602 4.6e-25 119.4 338 30.8
MSTRG.6876 Avicennia marina HOM05D003841 ORTHO05D004602 6.0e-25 119.0 329 35.0
Actinidia35303 Actinidia chinensis HOM05D003841 ORTHO05D004602 1.0e-24 118.2 354 31.9
Phvul.011G146700 Phaseolus vulgaris HOM05D003841 ORTHO05D004602 1.0e-24 118.2 323 32.5
TAR271G0005 Trochodendron aralioides HOM05D003841 ORTHO05D004602 1.0e-24 118.2 346 30.9
VMungo1127G0850 Vigna mungo HOM05D003841 ORTHO05D004602 1.0e-24 118.2 317 33.8
Psat7g160280 Pisum sativum HOM05D003841 ORTHO05D004602 1.3e-24 117.9 315 35.6
FAN11G1553 Fragaria x ananassa HOM05D003841 ORTHO05D004602 2.3e-24 117.1 320 34.1
Ah.06g183230 Amaranthus hybridus HOM05D003841 ORTHO05D004602 3.9e-24 116.3 305 34.8
arahy.Tifrunner.gnm1.ann1.GYU1HX Arachis hypogaea HOM05D003841 ORTHO05D004602 3.9e-24 116.3 332 33.1
Peaxi162Scf01365g00027 Petunia axillaris HOM05D003841 ORTHO05D004602 6.6e-24 115.5 328 33.8
Lj8A163G39 Lonicera japonica HOM05D003841 ORTHO05D004602 1.5e-23 114.4 340 34.7
ClCG05G014990 Citrullus lanatus HOM05D003841 ORTHO05D004602 1.9e-23 114.0 317 31.9
DCAR_010006 Daucus carota HOM05D003841 ORTHO05D004602 1.9e-23 114.0 309 32.0
HanXRQChr11g0332121 Helianthus annuus HOM05D003841 ORTHO05D004602 1.9e-23 114.0 322 33.2
Sc03g0009430 Simmondsia chinensis HOM05D003841 ORTHO05D004602 1.9e-23 114.0 307 33.2
TAR271G0006 Trochodendron aralioides HOM05D003841 ORTHO05D004602 1.9e-23 114.0 346 30.6
Haze_09572 Corylus avellana HOM05D003841 ORTHO05D004602 2.5e-23 113.6 338 35.5
Nn1g06911 Nelumbo nucifera HOM05D003841 ORTHO05D004602 2.5e-23 113.6 331 33.2
FvH4_3g21510 Fragaria vesca HOM05D003841 ORTHO05D004602 3.3e-23 113.2 324 33.6
Gohir.D13G147500 Gossypium hirsutum HOM05D003841 ORTHO05D004602 4.3e-23 112.8 322 32.9
Gorai.013G165300 Gossypium raimondii HOM05D003841 ORTHO05D004602 4.3e-23 112.8 322 32.9
Lsat_1_v5_gn_7_107821 Lactuca sativa HOM05D003841 ORTHO05D004602 4.3e-23 112.8 319 34.5
MD11G1230100 Malus domestica HOM05D003841 ORTHO05D004602 5.6e-23 112.5 323 32.2
TAR627G0073 Trochodendron aralioides HOM05D003841 ORTHO05D004602 5.6e-23 112.5 359 31.2
Gohir.A13G142900 Gossypium hirsutum HOM05D003841 ORTHO05D004602 7.3e-23 112.1 322 33.2
Lalb_Chr22g0357311 Lupinus albus HOM05D003841 ORTHO05D004602 7.3e-23 112.1 321 32.4
SalBow7G4379 Salvia bowleyana HOM05D003841 ORTHO05D004602 7.3e-23 112.1 314 30.6
DCAR_022502 Daucus carota HOM05D003841 ORTHO05D004602 1.2e-22 111.3 314 32.8
Thecc.07G059100 Theobroma cacao HOM05D003841 ORTHO05D004602 1.6e-22 110.9 325 32.0
Sed0013156 Sechium edule HOM05D003841 ORTHO05D004602 2.8e-22 110.2 319 31.7
Nitab4.5_0003052g0050 Nicotiana tabacum HOM05D003841 ORTHO05D004602 3.6e-22 109.8 284 36.6
Ca_18832_v3 Cicer arietinum L. HOM05D003841 ORTHO05D004602 6.2e-22 109.0 322 31.1
Ca_30091_v3 Cicer arietinum L. HOM05D003841 ORTHO05D004602 6.2e-22 109.0 322 31.1
ECA236G3199 Erigeron canadensis HOM05D003841 ORTHO05D004602 8.1e-22 108.6 322 32.6
MELO3C018156.2 Cucumis melo HOM05D003841 ORTHO05D004602 1.4e-21 107.8 323 29.1
Oeu052335.1 Olea europaea HOM05D003841 ORTHO05D004602 1.4e-21 107.8 320 30.3
Sabra11G0117400 Salix brachista HOM05D003841 ORTHO05D004602 1.4e-21 107.8 226 41.2
HPP92_004148 Vanilla planifolia HOM05D003841 ORTHO05D004602 2.4e-21 107.1 311 32.8
FAN21G0547 Fragaria x ananassa HOM05D003841 ORTHO05D004602 3.1e-21 106.7 324 32.7
Migut.M01831 Erythranthe guttata HOM05D003841 ORTHO05D004602 4.0e-21 106.3 310 34.2
Duzib170G0031 Durio zibethinus HOM05D003841 ORTHO05D004602 5.2e-21 105.9 322 32.3
Migut.H01878 Erythranthe guttata HOM05D003841 ORTHO05D004602 5.2e-21 105.9 337 31.8
MBI18_g38396_MAGBIO Magnolia biondii HOM05D003841 ORTHO05D004602 5.2e-21 105.9 325 31.4
CsaV3_3G022650 Cucumis sativus L. HOM05D003841 ORTHO05D004602 8.9e-21 105.1 321 30.2
FAN25G3758 Fragaria x ananassa HOM05D003841 ORTHO05D004602 1.5e-20 104.4 317 31.9
TAR623G1765 Trochodendron aralioides HOM05D003841 ORTHO05D004602 2.0e-20 104.0 333 30.0
Hund02157 Selenicereus undatus HOM05D003841 ORTHO05D004602 2.6e-20 103.6 221 39.4
SGA_v2.0_scaffold9G05000 Striga asiatica HOM05D003841 ORTHO05D004602 2.6e-20 103.6 324 33.6
Glyma.12G139800 Glycine max HOM05D003841 ORTHO05D004602 3.4e-20 103.2 341 28.2
Actinidia10692 Actinidia chinensis HOM05D003841 ORTHO05D004602 7.6e-20 102.1 243 34.6
PSO675G5063 Papaver somniferum HOM05D003841 ORTHO05D004602 7.6e-20 102.1 322 29.5
Lj3g0010893 Lotus japonicus HOM05D003841 ORTHO05D004602 1.3e-19 101.3 330 31.2
unitig_899.g15555 Utricularia gibba HOM05D003841 ORTHO05D004602 1.3e-19 101.3 306 33.0
Eucgr.F03390 Eucalyptus grandis HOM05D003841 ORTHO05D004602 6.4e-19 99.0 338 31.1
Prupe.4G197300 Prunus persica HOM05D003841 ORTHO05D004602 1.4e-18 97.8 320 31.6
MD03G1215500 Malus domestica HOM05D003841 ORTHO05D004602 3.2e-18 96.7 333 30.9
PSO541G4862 Papaver somniferum HOM05D003841 ORTHO05D004602 3.2e-18 96.7 333 29.7
RcHm_v2.0_Chr5g0036951 Rosa chinensis HOM05D003841 ORTHO05D004602 4.2e-18 96.3 221 34.8
PGSC0003DMG400019273 Solanum tuberosum HOM05D003841 ORTHO05D000515 7.1e-18 95.5 281 31.3
unitig_746.g26819 Utricularia gibba HOM05D003841 ORTHO05D004602 9.3e-18 95.1 293 32.8
SGA_v2.0_scaffold70G23570 Striga asiatica HOM05D003841 ORTHO05D004602 1.2e-17 94.7 303 32.7
DCAR_008683 Daucus carota HOM05D003841 ORTHO05D004602 2.1e-17 94.0 308 30.8
FAN16G3040 Fragaria x ananassa HOM05D003841 ORTHO05D004602 2.1e-17 94.0 321 31.8
Sopen07g032000 Solanum pennellii HOM05D003841 ORTHO05D004602 2.1e-17 94.0 217 39.2
Aqoxy1G03844 Aquilegia oxysepala HOM05D003841 ORTHO05D004602 7.8e-17 92.0 338 29.3
Solyc07g063870.3 Solanum lycopersicum HOM05D003841 ORTHO05D004602 7.8e-17 92.0 232 37.5
ATR0804G047 Amborella trichopoda HOM05D003841 ORTHO05D004602 1.3e-16 91.3 328 30.5
Glyma.12G216500 Glycine max HOM05D003841 ORTHO05D004602 5.1e-16 89.4 261 30.7
Zm00001eb171810 Zea mays HOM05D003841 ORTHO05D004602 5.1e-16 89.4 331 30.2
Zm00001eb413050 Zea mays HOM05D003841 ORTHO05D004602 6.6e-16 89.0 327 30.0
Glyma.13G284700 Glycine max HOM05D003841 ORTHO05D004602 1.1e-15 88.2 315 29.5
PSO675G0068 Papaver somniferum HOM05D003841 ORTHO05D004602 3.3e-15 86.7 312 29.5
MSTRG.14400 Avicennia marina HOM05D003841 ORTHO05D004602 4.3e-15 86.3 273 31.5
Cpa.g.sc80.126 Carica papaya HOM05D003841 ORTHO05D004602 4.3e-15 86.3 191 42.9
CDE05G3666 Ceratophyllum demersum HOM05D003841 ORTHO05D004602 1.6e-14 84.3 311 28.6
Lj3g0010292 Lotus japonicus HOM05D003841 ORTHO05D004602 2.8e-14 83.6 314 31.5
CDE05G3612 Ceratophyllum demersum HOM05D003841 ORTHO05D004602 1.1e-13 81.6 256 30.5
CAN.G64.40 Capsicum annuum HOM05D003841 ORTHO05D004602 1.4e-13 81.3 118 43.2
Actinidia05162 Actinidia chinensis HOM05D003841 ORTHO05D004602 5.3e-13 79.3 353 29.2
arahy.Tifrunner.gnm1.ann1.SKE74K Arachis hypogaea HOM05D003841 ORTHO05D004602 9.0e-13 78.6 323 28.8
Os08g0179900 Oryza sativa ssp. japonica HOM05D003841 ORTHO05D004602 1.2e-12 78.2 240 28.3
PSO541G5517 Papaver somniferum HOM05D003841 ORTHO05D004602 1.5e-12 77.8 213 32.4
ClCG10G006140 Citrullus lanatus HOM05D003841 ORTHO05D004602 2.6e-12 77.0 260 30.0
MELO3C016604.2 Cucumis melo HOM05D003841 ORTHO05D004602 3.4e-12 76.6 243 28.4
arahy.Tifrunner.gnm1.ann1.SRRR95 Arachis hypogaea HOM05D003841 ORTHO05D004602 4.5e-12 76.3 327 27.5
Sed0016497 Sechium edule HOM05D003841 ORTHO05D004602 4.9e-11 72.8 190 33.7
Gohir.D11G294233 Gossypium hirsutum HOM05D003841 ORTHO05D004602 6.4e-11 72.4 208 33.2
Gorai.007G317300 Gossypium raimondii HOM05D003841 ORTHO05D004602 6.4e-11 72.4 208 33.2
vmacro09595 Vaccinium macrocarpon HOM05D003841 ORTHO05D004602 6.4e-11 72.4 123 49.6
Ah.04g165190 Amaranthus hybridus HOM05D003841 ORTHO05D004602 1.1e-10 71.6 196 36.2
Cpa.g.c47761 Carica papaya HOM05D003841 ORTHO05D004602 5.4e-10 69.3 124 50.0
PSO384G0968 Papaver somniferum HOM05D003841 ORTHO05D004602 7.1e-10 68.9 332 25.3
Cfa021072 Carpinus fangiana HOM05D003841 ORTHO05D004602 1.6e-09 67.8 118 44.1
CsaV3_3G005690 Cucumis sativus L. HOM05D003841 ORTHO05D004602 1.6e-09 67.8 242 29.8
Lsat_1_v5_gn_2_59361 Lactuca sativa HOM05D003841 ORTHO05D004602 1.6e-09 67.8 154 36.4
Os03g0201000 Oryza sativa ssp. japonica HOM05D003841 ORTHO05D049799 4.6e-09 66.2 159 32.7
HPP92_005894 Vanilla planifolia HOM05D003841 ORTHO05D004602 4.6e-09 66.2 313 26.5
Gohir.A11G281650 Gossypium hirsutum HOM05D003841 ORTHO05D004602 6.0e-09 65.9 219 30.6
Oeu052334.1 Olea europaea HOM05D003841 ORTHO05D004602 1.3e-08 64.7 205 25.4
Mapoly0042s0124 Marchantia polymorpha HOM05D002766 ORTHO05D002809 1.8e-08 64.3 281 27.8
PSO339G6399 Papaver somniferum HOM05D003841 ORTHO05D004602 1.8e-08 64.3 333 24.6
SEGI_16254 Sequoiadendron giganteum HOM05D002766 ORTHO05D002809 2.8e-06 57.0 342 24.0
Sed0013484 Sechium edule HOM05D003841 ORTHO05D004602 6.2e-06 55.8 165 27.9


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