Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g20309 Brassica carinata HOM05D015522 ORTHO05D031943 9.4e-75 283.5 148 100.0
BolC5t31758H Brassica oleracea HOM05D015522 ORTHO05D031943 3.6e-66 255.0 141 95.0
C09p45130 Brassica napus HOM05D015522 ORTHO05D031943 5.7e-64 247.7 148 90.5
C05p30190 Brassica napus HOM05D015522 ORTHO05D027244 9.4e-51 203.8 114 93.9
C05p30200 Brassica napus HOM05D015522 ORTHO05D027244 2.0e-48 196.1 115 91.3
BcaC06g33789 Brassica carinata HOM05D004010 ORTHO05D004995 5.8e-16 88.2 93 61.3
C07p36860 Brassica napus HOM05D004010 ORTHO05D004995 5.8e-16 88.2 93 61.3
BolC7t44198H Brassica oleracea HOM05D004010 ORTHO05D004995 5.8e-16 88.2 93 61.3
BcaC06g30965 Brassica carinata HOM05D004010 ORTHO05D004995 9.9e-16 87.4 93 62.4
A06p40990 Brassica napus HOM05D004010 ORTHO05D004995 1.7e-15 86.7 93 60.2
BraA06t27018Z Brassica rapa HOM05D004010 ORTHO05D004995 1.7e-15 86.7 93 60.2
Sp2g16800 Schrenkiella parvula HOM05D004010 ORTHO05D004995 3.2e-14 82.4 93 58.1
Thhalv10003508m.g Eutrema salsugineum HOM05D004010 ORTHO05D004995 7.1e-14 81.3 93 58.1
BcaB07g33347 Brassica carinata HOM05D004010 ORTHO05D004995 2.3e-12 76.3 101 55.4
Aa31LG2G5000 Aethionema arabicum HOM05D004010 ORTHO05D004995 3.0e-12 75.9 150 41.3
BcaB05g24178 Brassica carinata HOM05D004010 ORTHO05D027244 5.1e-12 75.1 92 56.5
Carub.0005s0611 Capsella rubella HOM05D004010 ORTHO05D004995 5.1e-12 75.1 93 54.8
AL5G17090 Arabidopsis lyrata HOM05D004010 ORTHO05D004995 4.3e-11 72.0 93 52.7
CARHR149120 Cardamine hirsuta HOM05D004010 ORTHO05D004995 4.3e-11 72.0 93 52.7
THA.LOC104825324 Tarenaya hassleriana HOM05D004010 ORTHO05D004995 5.6e-11 71.6 118 44.1
AT3G27670 Arabidopsis thaliana HOM05D004010 ORTHO05D004995 1.6e-10 70.1 87 51.7
BcaC02g11087 Brassica carinata HOM05D004010 ORTHO05D006095 6.4e-07 58.2 37 86.5
BolC9t57385H Brassica oleracea HOM05D015522 ORTHO05D107211 1.4e-06 57.0 28 96.4
C04p20660 Brassica napus HOM05D015522 ORTHO05D040441 4.2e-06 55.5 28 92.9
BolC4t23593H Brassica oleracea HOM05D015522 ORTHO05D040441 4.2e-06 55.5 28 92.9


User provided reference genes

Program Settings