Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g20218 Brassica carinata HOM05D000353 ORTHO05D000174 1.9e-65 252.3 122 100.0
A06p35790 Brassica napus HOM05D000353 ORTHO05D000174 4.2e-28 128.3 123 55.3
C01p30060 Brassica napus HOM05D000353 ORTHO05D000174 1.7e-26 122.9 79 78.5
C04p41240 Brassica napus HOM05D000353 ORTHO05D000174 3.0e-26 122.1 108 59.3
BraA09t37616Z Brassica rapa HOM05D000353 ORTHO05D000174 3.0e-26 122.1 108 59.3
BraA06t25441Z Brassica rapa HOM05D000353 ORTHO05D000174 8.7e-26 120.6 108 59.3
C03p52500 Brassica napus HOM05D000353 ORTHO05D000174 2.5e-25 119.0 78 76.9
C09p46540 Brassica napus HOM05D000353 ORTHO05D000174 3.5e-19 98.6 45 100.0
BolC9t57507H Brassica oleracea HOM05D000353 ORTHO05D000174 1.3e-18 96.7 45 97.8
C04p44060 Brassica napus HOM05D000353 ORTHO05D000174 1.8e-15 86.3 41 95.1
C04p44100 Brassica napus HOM05D000353 ORTHO05D000174 1.8e-15 86.3 41 95.1
C04p44140 Brassica napus HOM05D000353 ORTHO05D000174 1.8e-15 86.3 41 95.1
BolC4t25987H Brassica oleracea HOM05D000353 ORTHO05D000174 1.8e-15 86.3 41 95.1
BolC9t56976H Brassica oleracea HOM05D000353 ORTHO05D000174 1.8e-15 86.3 41 95.1
C04p44030 Brassica napus HOM05D000353 ORTHO05D000174 5.3e-15 84.7 41 92.7
C03p63100 Brassica napus HOM05D000353 ORTHO05D000174 9.9e-14 80.5 114 41.2
C09p17500 Brassica napus HOM05D000353 ORTHO05D000174 1.3e-13 80.1 114 41.2
A09p11230 Brassica napus HOM05D000353 ORTHO05D000174 3.8e-13 78.6 120 37.5
C02p27610 Brassica napus HOM05D000353 ORTHO05D000174 6.4e-13 77.8 113 40.7
BolC2t09050H Brassica oleracea HOM05D000353 ORTHO05D000174 6.4e-13 77.8 114 40.4
BraA06t25438Z Brassica rapa HOM05D000353 ORTHO05D000174 6.4e-13 77.8 53 69.8
BolC5t34017H Brassica oleracea HOM05D000353 ORTHO05D000174 8.4e-13 77.4 114 40.4
A01p26990 Brassica napus HOM05D000353 ORTHO05D000174 1.1e-12 77.0 113 39.8
A03p67580 Brassica napus HOM05D000353 ORTHO05D000174 1.1e-12 77.0 100 42.0
BraA01t02710Z Brassica rapa HOM05D000353 ORTHO05D000174 1.1e-12 77.0 100 42.0
BraA01t02840Z Brassica rapa HOM05D000353 ORTHO05D000174 1.1e-12 77.0 113 39.8
BcaC05g29111 Brassica carinata HOM05D000353 ORTHO05D000174 1.4e-12 76.6 114 39.5
C05p53400 Brassica napus HOM05D000353 ORTHO05D000174 1.4e-12 76.6 114 39.5
BolC6t35509H Brassica oleracea HOM05D000353 ORTHO05D000174 1.4e-12 76.6 111 37.8
BcaC03g15824 Brassica carinata HOM05D000353 ORTHO05D000174 1.9e-12 76.3 97 42.3
BcaC06g33697 Brassica carinata HOM05D000353 ORTHO05D000174 1.9e-12 76.3 100 42.0
A07p14780 Brassica napus HOM05D000353 ORTHO05D000174 3.2e-12 75.5 100 42.0
C05p39980 Brassica napus HOM05D000353 ORTHO05D000174 3.2e-12 75.5 113 39.8
A02p28640 Brassica napus HOM05D000353 ORTHO05D000174 4.2e-12 75.1 113 39.8
BraA02t07899Z Brassica rapa HOM05D000353 ORTHO05D000174 4.2e-12 75.1 113 39.8
BolC5t32309H Brassica oleracea HOM05D000353 ORTHO05D000174 5.4e-12 74.7 117 39.3
C05p35900 Brassica napus HOM05D000353 ORTHO05D000174 7.1e-12 74.3 114 40.4
BolC6t39887H Brassica oleracea HOM05D000353 ORTHO05D000174 7.1e-12 74.3 108 38.9
AL1G50710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 9.3e-12 73.9 96 41.7
AL1G55630 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 9.3e-12 73.9 96 41.7
AL2G19920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 9.3e-12 73.9 96 41.7
AL2G22250 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 9.3e-12 73.9 96 41.7
AL4G20710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 9.3e-12 73.9 96 41.7
AL5G12710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 9.3e-12 73.9 96 41.7
AL6G41920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 9.3e-12 73.9 96 41.7
AL7G11640 Arabidopsis lyrata HOM05D000353 ORTHO05D010269 9.3e-12 73.9 96 41.7
AL8G21920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 9.3e-12 73.9 96 41.7
A02p24410 Brassica napus HOM05D000353 ORTHO05D000174 9.3e-12 73.9 92 42.4
C09p64200 Brassica napus HOM05D000353 ORTHO05D000174 9.3e-12 73.9 113 38.9
BolC9t59257H Brassica oleracea HOM05D000353 ORTHO05D000174 9.3e-12 73.9 113 38.9
BraA02t07430Z Brassica rapa HOM05D000353 ORTHO05D000174 9.3e-12 73.9 92 42.4
AL1G26420 Arabidopsis lyrata HOM05D003358 ORTHO05D003864 1.2e-11 73.6 90 44.4
A09p37000 Brassica napus HOM05D000353 ORTHO05D000174 1.2e-11 73.6 113 37.2
BcaB04g17265 Brassica carinata HOM05D000353 ORTHO05D000174 1.6e-11 73.2 104 40.4
BcaC03g14334 Brassica carinata HOM05D000353 ORTHO05D000174 1.6e-11 73.2 124 36.3
BcaC08g47173 Brassica carinata HOM05D000353 ORTHO05D010037 1.6e-11 73.2 104 40.4
BolC4t26686H Brassica oleracea HOM05D000353 ORTHO05D000174 1.6e-11 73.2 100 41.0
Carub.0016s0007 Capsella rubella HOM05D000353 ORTHO05D000174 2.1e-11 72.8 132 35.6
BcaB02g11004 Brassica carinata HOM05D000353 ORTHO05D000174 2.7e-11 72.4 113 39.8
BcaB04g18330 Brassica carinata HOM05D000353 ORTHO05D000174 2.7e-11 72.4 113 39.8
AL9U11500 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 4.6e-11 71.6 96 40.6
BcaB02g06410 Brassica carinata HOM05D000353 ORTHO05D000174 7.9e-11 70.9 113 38.9
C09p23350 Brassica napus HOM05D000353 ORTHO05D000174 2.3e-10 69.3 98 40.8
A05p21320 Brassica napus HOM05D000353 ORTHO05D000174 3.9e-10 68.6 111 39.6
BraA05t21040Z Brassica rapa HOM05D000353 ORTHO05D000174 3.9e-10 68.6 111 39.6
Carub.0008s0745 Capsella rubella HOM05D000353 ORTHO05D000174 3.9e-10 68.6 123 35.0
Thhalv10027242m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 5.1e-10 68.2 118 34.7
Carub.0076s0001 Capsella rubella HOM05D000353 ORTHO05D000174 6.7e-10 67.8 132 34.8
Thhalv10002946m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 6.7e-10 67.8 118 33.9
EL10Ac7g16273 Beta vulgaris HOM05D000353 ORTHO05D000174 1.1e-09 67.0 97 38.1
Thhalv10029126m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.1e-09 67.0 118 33.9
Carub.0004s0702 Capsella rubella HOM05D000353 ORTHO05D000174 1.5e-09 66.6 126 34.9
BcaC03g15183 Brassica carinata HOM05D000353 ORTHO05D000174 2.5e-09 65.9 102 41.2
Carub.0025s0004 Capsella rubella HOM05D000353 ORTHO05D000174 2.5e-09 65.9 123 33.3
Carub.0006s2622 Capsella rubella HOM05D000353 ORTHO05D000174 3.3e-09 65.5 132 34.1
Carub.0012s0011 Capsella rubella HOM05D000353 ORTHO05D000174 3.3e-09 65.5 129 34.1
Thhalv10026883m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 7.4e-09 64.3 118 32.2
A01p18290 Brassica napus HOM05D000353 ORTHO05D000174 9.6e-09 63.9 78 42.3
C03p69980 Brassica napus HOM05D000353 ORTHO05D000174 9.6e-09 63.9 82 41.5
Thhalv10029157m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.3e-08 63.5 95 38.9
BraA07t28122Z Brassica rapa HOM05D000353 ORTHO05D000174 1.6e-08 63.2 100 39.0
BcaB08g35053 Brassica carinata HOM05D000353 ORTHO05D000174 2.1e-08 62.8 119 32.8
BolC7t42686H Brassica oleracea HOM05D000353 ORTHO05D000174 2.1e-08 62.8 91 38.5
BolC5t34002H Brassica oleracea HOM05D000353 ORTHO05D000174 2.8e-08 62.4 114 37.7
EL10Ac1g00284 Beta vulgaris HOM05D000353 ORTHO05D000174 3.7e-08 62.0 95 36.8
BcaC03g15577 Brassica carinata HOM05D000353 ORTHO05D000174 3.7e-08 62.0 91 38.5
BcaC06g36089 Brassica carinata HOM05D000353 ORTHO05D000174 3.7e-08 62.0 97 39.2
C05p49950 Brassica napus HOM05D000353 ORTHO05D000174 3.7e-08 62.0 91 38.5
C07p07970 Brassica napus HOM05D000353 ORTHO05D000174 3.7e-08 62.0 97 39.2
BolC7t41214H Brassica oleracea HOM05D000353 ORTHO05D000174 3.7e-08 62.0 97 39.2
C05p54930 Brassica napus HOM05D000353 ORTHO05D000174 6.2e-08 61.2 101 36.6
BolC2t06820H Brassica oleracea HOM05D000353 ORTHO05D000174 6.2e-08 61.2 101 36.6
BolC2t09293H Brassica oleracea HOM05D000353 ORTHO05D000174 6.2e-08 61.2 91 37.4
BolC5t34161H Brassica oleracea HOM05D000353 ORTHO05D000174 6.2e-08 61.2 101 36.6
AT1G52950 Arabidopsis thaliana HOM05D000353 ORTHO05D000174 1.1e-07 60.5 115 31.3
Thhalv10027364m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.8e-07 59.7 134 29.9
C06p06210 Brassica napus HOM05D000353 ORTHO05D000174 2.4e-07 59.3 101 36.6
BolC6t35732H Brassica oleracea HOM05D000353 ORTHO05D000174 2.4e-07 59.3 101 36.6
Thhalv10002267m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 3.1e-07 58.9 118 33.1
BcaB03g14941 Brassica carinata HOM05D000353 ORTHO05D000174 4.0e-07 58.5 76 39.5
A03p65170 Brassica napus HOM05D000353 ORTHO05D000174 4.0e-07 58.5 101 35.6
BraA03t15575Z Brassica rapa HOM05D000353 ORTHO05D000174 4.0e-07 58.5 101 35.6
A09p27800 Brassica napus HOM05D000353 ORTHO05D000174 5.3e-07 58.2 70 42.9
BraA09t38350Z Brassica rapa HOM05D000353 ORTHO05D000174 5.3e-07 58.2 70 42.9
C04p25190 Brassica napus HOM05D000353 ORTHO05D000174 6.9e-07 57.8 91 36.3
BolC4t24023H Brassica oleracea HOM05D000353 ORTHO05D000174 6.9e-07 57.8 91 36.3
BolC4t24150H Brassica oleracea HOM05D000353 ORTHO05D000174 6.9e-07 57.8 103 33.0
Ah.06g192340 Amaranthus hybridus HOM05D003062 ORTHO05D003468 1.2e-06 57.0 96 33.3
Thhalv10029167m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.2e-06 57.0 89 37.1
Thhalv10000424m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.5e-06 56.6 89 36.0
BcaC01g00750 Brassica carinata HOM05D000353 ORTHO05D000174 2.0e-06 56.2 90 31.1
BraA03t14652Z Brassica rapa HOM05D000353 ORTHO05D000174 2.0e-06 56.2 108 31.5
BraA06t25279Z Brassica rapa HOM05D000353 ORTHO05D000174 2.0e-06 56.2 56 44.6
Carub.0001s3398 Capsella rubella HOM05D000353 ORTHO05D000174 2.0e-06 56.2 123 31.7
BcaB05g22552 Brassica carinata HOM05D000353 ORTHO05D000174 2.6e-06 55.8 108 30.6
BcaC02g08804 Brassica carinata HOM05D000353 ORTHO05D000174 2.6e-06 55.8 98 34.7
A02p32050 Brassica napus HOM05D000353 ORTHO05D000174 2.6e-06 55.8 101 33.7
BraA02t08216Z Brassica rapa HOM05D000353 ORTHO05D000174 2.6e-06 55.8 101 33.7
BraA05t22072Z Brassica rapa HOM05D000353 ORTHO05D000174 2.6e-06 55.8 113 31.9
Thhalv10002301m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 3.4e-06 55.5 89 37.1
Thhalv10003062m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 3.4e-06 55.5 89 36.0
C05p58280 Brassica napus HOM05D000096 ORTHO05D000045 4.5e-06 55.1 41 51.2
BolC5t33651H Brassica oleracea HOM05D000353 ORTHO05D000174 5.8e-06 54.7 113 31.0
Thhalv10000133m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 5.8e-06 54.7 105 34.3
BcaC02g09046 Brassica carinata HOM05D000353 ORTHO05D000174 7.6e-06 54.3 97 34.0
C05p49080 Brassica napus HOM05D000353 ORTHO05D000174 7.6e-06 54.3 113 33.6
C09p27100 Brassica napus HOM05D000353 ORTHO05D000174 7.6e-06 54.3 101 33.7
BcaC06g33059 Brassica carinata HOM05D000353 ORTHO05D000174 1.0e-05 53.9 113 29.2
A03p66100 Brassica napus HOM05D000353 ORTHO05D000174 1.0e-05 53.9 95 30.5
C08p24390 Brassica napus HOM05D000353 ORTHO05D000174 1.0e-05 53.9 113 29.2
BraA09t40707Z Brassica rapa HOM05D000353 ORTHO05D000174 1.0e-05 53.9 95 30.5


User provided reference genes

Program Settings