Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g20148 Brassica carinata HOM05D004538 ORTHO05D006068 4.6e-222 774.2 390 100.0
BcaC04g20151 Brassica carinata HOM05D004538 ORTHO05D006068 1.0e-216 756.5 389 98.2
BraA10t43427Z Brassica rapa HOM05D004538 ORTHO05D006068 2.2e-216 755.4 389 97.9
C09p47190 Brassica napus HOM05D002718 ORTHO05D003269 4.9e-216 754.2 389 97.9
BcaC04g20158 Brassica carinata HOM05D004538 ORTHO05D006068 6.4e-216 753.8 389 97.7
BolC9t57574H Brassica oleracea HOM05D004538 ORTHO05D006068 1.1e-215 753.1 389 97.7
A10p13290 Brassica napus HOM05D002718 ORTHO05D003269 3.2e-215 751.5 387 97.7
BcaB08g35975 Brassica carinata HOM05D004538 ORTHO05D006068 7.1e-215 750.4 389 97.4
C09p47240 Brassica napus HOM05D004538 ORTHO05D006068 7.9e-214 746.9 380 98.7
AT5G56090 Arabidopsis thaliana HOM05D004538 ORTHO05D006068 6.7e-213 743.8 386 96.6
Sp6g17940 Schrenkiella parvula HOM05D004538 ORTHO05D006068 1.6e-211 739.2 386 95.9
AL8G31670 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 1.4e-210 736.1 389 95.1
Carub.0008s1641 Capsella rubella HOM05D004538 ORTHO05D006068 1.8e-210 735.7 386 95.6
Thhalv10013497m.g Eutrema salsugineum HOM05D004538 ORTHO05D006068 4.0e-210 734.6 389 94.9
AL2G22990 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 2.0e-209 732.3 389 94.9
AL2G24490 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 3.8e-208 728.0 389 94.3
CARHR269470 Cardamine hirsuta HOM05D004538 ORTHO05D006068 3.8e-208 728.0 386 94.0
Aa31LG3G12000 Aethionema arabicum HOM05D004538 ORTHO05D006068 6.3e-203 710.7 386 92.7
THA.LOC104811692 Tarenaya hassleriana HOM05D004538 ORTHO05D006068 7.2e-199 697.2 386 89.1
Ciclev10008262m.g Citrus clementina HOM05D004538 ORTHO05D006068 1.9e-191 672.5 384 85.7
Eucgr.F02006 Eucalyptus grandis HOM05D004538 ORTHO05D006068 4.7e-190 667.9 381 86.1
Nitab4.5_0005622g0040 Nicotiana tabacum HOM05D004538 ORTHO05D006068 1.0e-189 666.8 384 85.4
TWI39G0910 Tripterygium wilfordii HOM05D004538 ORTHO05D006068 9.7e-188 660.2 382 84.0
Haze_03267 Corylus avellana HOM05D004538 ORTHO05D006068 1.3e-187 659.8 382 84.3
Peaxi162Scf00173g00324 Petunia axillaris HOM05D004538 ORTHO05D006068 1.3e-187 659.8 384 85.2
Sabra11G0139500 Salix brachista HOM05D004538 ORTHO05D006068 2.2e-187 659.1 380 84.5
Thecc.07G004000 Theobroma cacao HOM05D004538 ORTHO05D006068 2.8e-187 658.7 383 83.8
Duzib268G1486 Durio zibethinus HOM05D004538 ORTHO05D006068 8.2e-187 657.1 382 84.8
PGR083G1782 Punica granatum HOM05D004538 ORTHO05D006068 2.4e-186 655.6 382 83.5
Sopen11g002920 Solanum pennellii HOM05D004538 ORTHO05D006068 2.4e-186 655.6 384 84.9
Potri.011G166800 Populus trichocarpa HOM05D004538 ORTHO05D006068 4.1e-186 654.8 380 83.7
Solyc11g007000.2 Solanum lycopersicum HOM05D004538 ORTHO05D006068 4.1e-186 654.8 384 84.6
CsaV3_4G008160 Cucumis sativus L. HOM05D004538 ORTHO05D006068 5.3e-186 654.4 383 83.0
Prupe.8G086500 Prunus persica HOM05D004538 ORTHO05D006068 9.1e-186 653.7 382 82.7
unitig_899.g14715 Utricularia gibba HOM05D004538 ORTHO05D006068 9.1e-186 653.7 382 83.8
CAN.G645.5 Capsicum annuum HOM05D004538 ORTHO05D006068 1.5e-185 652.9 384 84.1
Prupe.4G230100 Prunus persica HOM05D004538 ORTHO05D006068 2.6e-185 652.1 382 82.2
LjContig00081g0007081 Lotus japonicus HOM05D004538 ORTHO05D006068 4.5e-185 651.4 382 82.7
Lalb_Chr04g0247681 Lupinus albus HOM05D004538 ORTHO05D006068 5.9e-185 651.0 381 83.7
COL.COLO4_07768 Corchorus olitorius HOM05D004538 ORTHO05D006068 1.0e-184 650.2 382 83.8
Sed0002758 Sechium edule HOM05D004538 ORTHO05D006068 1.0e-184 650.2 383 82.8
QL09p046970 Quercus lobata HOM05D004538 ORTHO05D006068 1.3e-184 649.8 377 83.6
Ca_06424_v3 Cicer arietinum L. HOM05D000527 ORTHO05D000559 1.7e-184 649.4 383 82.5
Hund25422 Selenicereus undatus HOM05D004538 ORTHO05D006068 2.2e-184 649.0 386 81.3
PGSC0003DMG400023975 Solanum tuberosum HOM05D004538 ORTHO05D006068 2.2e-184 649.0 384 84.1
CSS0012792 Camellia sinensis var. sinensis HOM05D004538 ORTHO05D006068 2.9e-184 648.7 382 82.2
Cpa.g.sc97.88 Carica papaya HOM05D004538 ORTHO05D006068 2.9e-184 648.7 382 82.5
Phvul.008G282700 Phaseolus vulgaris HOM05D004538 ORTHO05D006068 3.8e-184 648.3 382 81.7
Lj5g0024294 Lotus japonicus HOM05D004538 ORTHO05D006068 5.0e-184 647.9 382 82.5
Cc02_g09720 Coffea canephora HOM05D004538 ORTHO05D006068 6.5e-184 647.5 382 83.0
Glyma.14G010400 Glycine max HOM05D004538 ORTHO05D006068 8.5e-184 647.1 378 82.5
Lsat_1_v5_gn_7_116401 Lactuca sativa HOM05D004538 ORTHO05D006068 8.5e-184 647.1 381 81.6
arahy.Tifrunner.gnm1.ann1.01YFCZ Arachis hypogaea HOM05D004538 ORTHO05D006068 1.5e-183 646.4 380 83.4
CiPaw.15G107100 Carya illinoinensis HOM05D004538 ORTHO05D006068 1.9e-183 646.0 382 81.9
ClCG07G010160 Citrullus lanatus HOM05D004538 ORTHO05D006068 1.9e-183 646.0 394 81.0
MELO3C016120.2 Cucumis melo HOM05D004538 ORTHO05D006068 1.9e-183 646.0 394 80.7
GSVIVG01014777001 Vitis vinifera HOM05D004538 ORTHO05D006068 1.9e-183 646.0 382 82.2
SGA_v2.0_scaffold62G21339 Striga asiatica HOM05D004538 ORTHO05D006068 2.5e-183 645.6 382 83.0
VMungo0647G1241 Vigna mungo HOM05D004538 ORTHO05D006068 2.5e-183 645.6 381 80.6
Glyma.02G303400 Glycine max HOM05D004538 ORTHO05D006068 3.2e-183 645.2 387 80.4
TAR626G1654 Trochodendron aralioides HOM05D004538 ORTHO05D006068 4.2e-183 644.8 382 81.7
CANSAT11G1513 Cannabis sativa HOM05D004538 ORTHO05D006068 5.5e-183 644.4 382 81.2
Cc02_g29800 Coffea canephora HOM05D004538 ORTHO05D006068 7.2e-183 644.0 382 82.5
DCAR_013768 Daucus carota HOM05D004538 ORTHO05D006068 2.1e-182 642.5 380 82.9
Lj8A182T63 Lonicera japonica HOM05D004538 ORTHO05D006068 2.1e-182 642.5 380 83.2
arahy.Tifrunner.gnm1.ann1.0Z7D2W Arachis hypogaea HOM05D004538 ORTHO05D006068 2.7e-182 642.1 380 82.4
Migut.F00884 Erythranthe guttata HOM05D004538 ORTHO05D006068 4.7e-182 641.3 384 81.5
Hma1.2p1_0321F.1_g124200 Hydrangea macrophylla HOM05D004538 ORTHO05D006068 4.7e-182 641.3 381 82.2
RcHm_v2.0_Chr6g0267391 Rosa chinensis HOM05D004538 ORTHO05D006068 4.7e-182 641.3 382 81.4
Actinidia00835 Actinidia chinensis HOM05D004538 ORTHO05D006068 6.1e-182 641.0 382 82.2
Gohir.D13G132900 Gossypium hirsutum HOM05D004538 ORTHO05D006068 6.1e-182 641.0 382 81.4
Gohir.A13G129700 Gossypium hirsutum HOM05D004538 ORTHO05D006068 1.4e-181 639.8 382 81.4
Gorai.013G149100 Gossypium raimondii HOM05D004538 ORTHO05D006068 1.4e-181 639.8 382 81.2
Lj1C898T12 Lonicera japonica HOM05D004538 ORTHO05D006068 3.9e-181 638.3 380 81.3
Medtr3g095790 Medicago truncatula HOM05D004538 ORTHO05D006068 8.8e-181 637.1 373 82.0
PSO675G3744 Papaver somniferum HOM05D004538 ORTHO05D006068 8.8e-181 637.1 376 81.4
HanXRQChr04g0114571 Helianthus annuus HOM05D004538 ORTHO05D006068 1.1e-180 636.7 387 80.6
PSO541G6331 Papaver somniferum HOM05D004538 ORTHO05D006068 2.6e-180 635.6 374 81.3
TPR.G1264 Trifolium pratense HOM05D004538 ORTHO05D006068 2.6e-180 635.6 380 80.8
Aqoxy7G01640 Aquilegia oxysepala HOM05D004538 ORTHO05D006068 3.3e-180 635.2 385 80.0
ECA236G0032 Erigeron canadensis HOM05D004538 ORTHO05D006068 3.3e-180 635.2 383 80.9
Psat2g005560 Pisum sativum HOM05D004538 ORTHO05D006068 5.7e-180 634.4 374 81.6
Dinv31347 Davidia involucrata HOM05D004538 ORTHO05D006068 7.4e-180 634.0 367 83.4
EL10Ac2g02751 Beta vulgaris HOM05D004538 ORTHO05D006068 1.3e-179 633.3 386 78.5
Medtr5g096830 Medicago truncatula HOM05D004538 ORTHO05D006068 1.3e-179 633.3 373 82.6
RcHm_v2.0_Chr5g0075121 Rosa chinensis HOM05D004538 ORTHO05D006068 3.7e-179 631.7 381 79.8
Hund19415 Selenicereus undatus HOM05D004538 ORTHO05D006068 3.7e-179 631.7 385 79.2
HanXRQChr11g0334561 Helianthus annuus HOM05D004538 ORTHO05D006068 6.3e-179 630.9 382 80.4
Sc07g0002240 Simmondsia chinensis HOM05D004538 ORTHO05D006068 6.3e-179 630.9 377 82.5
FvH4_3g41910 Fragaria vesca HOM05D004538 ORTHO05D006068 8.2e-179 630.6 381 79.5
Ah.12g065010 Amaranthus hybridus HOM05D004538 ORTHO05D006068 1.4e-178 629.8 386 78.8
Oeu036424.1 Olea europaea HOM05D004538 ORTHO05D006068 1.8e-178 629.4 382 81.2
FAN11G3993 Fragaria x ananassa HOM05D004538 ORTHO05D006068 3.1e-178 628.6 381 79.0
FAN21G0976 Fragaria x ananassa HOM05D004538 ORTHO05D006068 5.3e-178 627.9 381 78.7
AUR62001067 Chenopodium quinoa HOM05D004538 ORTHO05D006068 9.1e-178 627.1 386 77.7
FAN25G0511 Fragaria x ananassa HOM05D004538 ORTHO05D006068 1.6e-177 626.3 381 78.5
SalBow6G4226 Salvia bowleyana HOM05D004538 ORTHO05D006068 2.0e-177 625.9 383 80.7
PSO063G5767 Papaver somniferum HOM05D004538 ORTHO05D006068 2.6e-177 625.5 376 80.3
BolC9t57580H Brassica oleracea HOM05D004538 ORTHO05D006068 7.2e-175 617.5 381 85.6
Nn1g08442 Nelumbo nucifera HOM05D004538 ORTHO05D006068 9.4e-175 617.1 379 77.8
vmacro09607 Vaccinium macrocarpon HOM05D004538 ORTHO05D006068 8.8e-173 610.5 439 70.4
MBI14_g30901_MAGBIO Magnolia biondii HOM05D004538 ORTHO05D006068 9.1e-170 600.5 383 76.5
ATR0751G112 Amborella trichopoda HOM05D004538 ORTHO05D006068 2.7e-169 599.0 376 77.1
Os08g0496000 Oryza sativa ssp. japonica HOM05D004538 ORTHO05D006068 3.8e-168 595.1 371 76.5
MD02G1271400 Malus domestica HOM05D004538 ORTHO05D006068 7.5e-164 580.9 334 82.3
HPP92_015457 Vanilla planifolia HOM05D004538 ORTHO05D006068 1.1e-162 577.0 377 71.9
AUR62032611 Chenopodium quinoa HOM05D004538 ORTHO05D006068 5.9e-153 544.7 386 71.0
CDE06G0653 Ceratophyllum demersum HOM05D004538 ORTHO05D006068 8.6e-152 540.8 357 71.7
AL8G31690 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 5.2e-149 531.6 279 96.1
Zm00001eb033900 Zea mays HOM05D004538 ORTHO05D006068 2.2e-147 526.2 383 67.1
Mapoly0020s0071 Marchantia polymorpha HOM05D004538 ORTHO05D006068 7.0e-146 521.2 377 68.2
Nitab4.5_0001437g0060 Nicotiana tabacum HOM05D004538 ORTHO05D006068 9.2e-146 520.8 286 87.8
Pp3c7_5710 Physcomitrium patens HOM05D004538 ORTHO05D006068 5.2e-141 505.0 375 66.7
AUR62031724 Chenopodium quinoa HOM05D004538 ORTHO05D006068 1.5e-140 503.4 387 66.7
Cc02_g29840 Coffea canephora HOM05D004538 ORTHO05D006068 3.9e-136 488.8 345 73.6
Manes.01G005033 Manihot esculenta HOM05D004538 ORTHO05D006068 3.9e-136 488.8 382 66.5
CDE02G3208 Ceratophyllum demersum HOM05D004538 ORTHO05D006068 2.5e-135 486.1 374 61.8
AagrBONN_evm.TU.Sc2ySwM_368.2501 Anthoceros agrestis HOM05D004538 ORTHO05D006068 8.9e-133 477.6 357 66.4
SMO353G0004 Selaginella moellendorffii HOM05D004538 ORTHO05D006068 1.5e-132 476.9 359 66.9
CBR_g24146 Chara braunii HOM05D004538 ORTHO05D006068 9.9e-132 474.2 365 63.8
Atru.chr2.2684 Acer truncatum HOM05D004538 ORTHO05D006068 2.3e-128 463.0 276 81.9
Aa31LG3G11950 Aethionema arabicum HOM05D004538 ORTHO05D006068 7.6e-124 448.0 252 89.3
CDE03G0061 Ceratophyllum demersum HOM05D004538 ORTHO05D006068 3.3e-119 432.6 289 71.3
FvH4_2g10180 Fragaria vesca HOM05D004538 ORTHO05D006068 4.9e-115 418.7 246 81.7
Potri.001G469701 Populus trichocarpa HOM05D004538 ORTHO05D006068 2.4e-114 416.4 281 74.4
SalBow6G3380 Salvia bowleyana HOM05D004538 ORTHO05D006068 1.3e-112 410.6 383 58.2
FAN24G0261 Fragaria x ananassa HOM05D004538 ORTHO05D006068 1.7e-107 393.7 297 67.3
MD07G1040600 Malus domestica HOM05D004538 ORTHO05D006068 2.7e-105 386.3 253 76.3
A10p13310 Brassica napus HOM05D004538 ORTHO05D006068 1.8e-104 383.6 234 86.3
Nitab4.5_0004391g0070 Nicotiana tabacum HOM05D004538 ORTHO05D006068 1.1e-98 364.4 249 75.9
Cre02.g082700 Chlamydomonas reinhardtii HOM05D004538 ORTHO05D006068 2.7e-97 359.8 359 54.0
Atru.chr2.2623 Acer truncatum HOM05D004538 ORTHO05D006068 7.9e-97 358.2 211 84.8
Duzib213G1090 Durio zibethinus HOM05D004538 ORTHO05D006068 3.9e-96 355.9 250 72.0
PRCOL_00000259 Prasinoderma coloniale HOM05D004538 ORTHO05D006068 1.6e-94 350.5 329 53.5
SEGI_29632 Sequoiadendron giganteum HOM05D004538 ORTHO05D006068 2.9e-91 339.7 201 80.1
Cc02_g29790 Coffea canephora HOM05D004538 ORTHO05D006068 2.5e-82 310.1 226 71.7
Aqoxy289s001 Aquilegia oxysepala HOM05D004538 ORTHO05D008153 2.2e-75 287.0 211 68.7
Aqoxy2G00269 Aquilegia oxysepala HOM05D004538 ORTHO05D006068 2.2e-70 270.4 174 76.4
SHI46402 Sapria himalayana HOM05D004538 ORTHO05D006068 3.0e-64 250.0 168 73.2
SHI05855 Sapria himalayana HOM05D004538 ORTHO05D006068 2.4e-61 240.4 168 71.4
MSTRG.9067 Avicennia marina HOM05D004538 ORTHO05D006068 1.3e-59 234.6 124 87.9
Haze_27104 Corylus avellana HOM05D004538 ORTHO05D163757 2.9e-59 233.4 373 40.5
Atru.chr2.2696 Acer truncatum HOM05D004538 ORTHO05D006068 4.7e-57 226.1 136 82.4
Haze_26959 Corylus avellana HOM05D004538 ORTHO05D165751 7.5e-55 218.8 291 42.3
SHI05856 Sapria himalayana HOM05D004538 ORTHO05D006068 2.7e-44 183.7 134 67.9
Aqoxy2G00270 Aquilegia oxysepala HOM05D004538 ORTHO05D006068 7.0e-37 159.1 84 89.3
Duzib268G1762 Durio zibethinus HOM05D004538 ORTHO05D006068 3.5e-36 156.8 113 72.6
Atru.chr2.2627 Acer truncatum HOM05D000397 ORTHO05D002023 1.1e-34 151.8 112 72.3
QL03p014007 Quercus lobata HOM05D001565 ORTHO05D005515 5.6e-34 149.4 112 69.6
MSTRG.9065 Avicennia marina HOM05D004538 ORTHO05D006068 1.3e-30 138.3 89 75.3
MSTRG.9077 Avicennia marina HOM05D004538 ORTHO05D006068 1.8e-24 117.9 77 75.3
Atru.chr2.2679 Acer truncatum HOM05D004538 ORTHO05D052265 4.9e-22 109.8 64 81.2
QL10p039376 Quercus lobata HOM05D004538 ORTHO05D006068 1.9e-21 107.8 77 68.8
ATR0499G006 Amborella trichopoda HOM05D004538 ORTHO05D066479 5.4e-21 106.3 117 53.0
MD02G1271500 Malus domestica HOM05D004538 ORTHO05D006068 5.6e-18 96.3 60 85.0
RcHm_v2.0_Chr6g0267421 Rosa chinensis HOM05D004538 ORTHO05D006068 4.7e-17 93.2 60 80.0
ATR0499G019 Amborella trichopoda HOM05D004538 ORTHO05D006068 1.1e-13 82.0 58 63.8
Cc02_g29820 Coffea canephora HOM05D004538 ORTHO05D006068 1.1e-13 82.0 68 63.2
QL02p081848 Quercus lobata HOM05D007814 ORTHO05D009902 1.4e-13 81.6 50 74.0
Atru.chr2.2641 Acer truncatum HOM05D004538 ORTHO05D052874 3.0e-11 73.9 44 77.3


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