Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g20080 Brassica carinata HOM05D000977 ORTHO05D001094 3.0e-47 191.4 92 100.0
BcaC02g10149 Brassica carinata HOM05D000977 ORTHO05D001094 9.7e-46 186.4 91 97.8
BcaC02g10227 Brassica carinata HOM05D000977 ORTHO05D001094 4.8e-45 184.1 91 96.7
BcaC06g36215 Brassica carinata HOM05D000977 ORTHO05D001094 6.3e-45 183.7 91 96.7
BcaC03g16219 Brassica carinata HOM05D000977 ORTHO05D001094 1.1e-44 183.0 91 96.7
BcaC02g09848 Brassica carinata HOM05D000977 ORTHO05D001094 2.0e-43 178.7 91 93.4
BcaC02g12311 Brassica carinata HOM05D000977 ORTHO05D001094 2.1e-40 168.7 91 86.8
BcaC07g36913 Brassica carinata HOM05D000977 ORTHO05D001094 2.2e-37 158.7 91 83.5
BcaB05g22218 Brassica carinata HOM05D000977 ORTHO05D001094 2.8e-37 158.3 91 83.5
BcaB01g01058 Brassica carinata HOM05D000977 ORTHO05D001094 7.0e-36 153.7 91 80.2
BolC5t32181H Brassica oleracea HOM05D000977 ORTHO05D001094 2.2e-34 148.7 81 86.4
BcaB03g14367 Brassica carinata HOM05D000977 ORTHO05D001094 1.5e-33 146.0 90 75.6
BcaC09g50525 Brassica carinata HOM05D000977 ORTHO05D001094 1.9e-33 145.6 91 74.7
BcaC06g35365 Brassica carinata HOM05D000977 ORTHO05D001094 2.5e-33 145.2 90 75.6
BcaC05g27350 Brassica carinata HOM05D000977 ORTHO05D001094 3.2e-33 144.8 91 73.6
BcaB07g33073 Brassica carinata HOM05D000977 ORTHO05D001094 4.2e-33 144.4 99 73.7
BcaC01g02707 Brassica carinata HOM05D000977 ORTHO05D001094 2.7e-32 141.7 90 75.6
BcaB04g17253 Brassica carinata HOM05D000977 ORTHO05D001094 6.1e-32 140.6 91 72.5
BcaC09g49808 Brassica carinata HOM05D000977 ORTHO05D001094 1.4e-31 139.4 90 73.3
BolC2t11220H Brassica oleracea HOM05D000977 ORTHO05D001094 2.3e-31 138.7 91 71.4
BcaB01g03292 Brassica carinata HOM05D000977 ORTHO05D001094 3.0e-31 138.3 91 71.4
BcaC09g51272 Brassica carinata HOM05D000977 ORTHO05D001094 5.2e-31 137.5 86 74.4
BcaB04g18310 Brassica carinata HOM05D000977 ORTHO05D001094 1.3e-29 132.9 91 69.2
BolC5t33624H Brassica oleracea HOM05D000977 ORTHO05D001094 5.3e-28 127.5 101 64.4
BcaC03g15482 Brassica carinata HOM05D000977 ORTHO05D001094 3.5e-27 124.8 96 64.6
BcaB06g29622 Brassica carinata HOM05D000977 ORTHO05D001094 4.5e-27 124.4 91 65.9
BcaC08g44528 Brassica carinata HOM05D000977 ORTHO05D001094 4.5e-27 124.4 91 65.9
BcaB05g21894 Brassica carinata HOM05D000977 ORTHO05D001094 6.8e-23 110.5 91 64.8
BcaB08g35649 Brassica carinata HOM05D000977 ORTHO05D001094 2.2e-21 105.5 65 76.9
BcaB07g32894 Brassica carinata HOM05D000977 ORTHO05D001094 1.8e-20 102.4 65 75.4
BcaC05g27458 Brassica carinata HOM05D000977 ORTHO05D001094 7.0e-20 100.5 65 72.3
BcaC04g22236 Brassica carinata HOM05D000977 ORTHO05D001094 2.0e-19 99.0 66 69.7
BcaB08g35729 Brassica carinata HOM05D000977 ORTHO05D001094 3.5e-19 98.2 83 60.2
BcaC03g17204 Brassica carinata HOM05D000977 ORTHO05D001094 1.0e-18 96.7 67 67.2
BcaC01g00057 Brassica carinata HOM05D000977 ORTHO05D001094 2.2e-18 95.5 66 65.2
BcaC08g45212 Brassica carinata HOM05D000977 ORTHO05D001094 2.9e-18 95.1 65 67.7
BcaC08g44296 Brassica carinata HOM05D000977 ORTHO05D001094 6.5e-18 94.0 67 64.2
BcaC04g21749 Brassica carinata HOM05D000977 ORTHO05D001094 3.2e-17 91.7 69 62.3
BcaC05g29030 Brassica carinata HOM05D000977 ORTHO05D001094 3.2e-17 91.7 65 63.1
BolC9t55670H Brassica oleracea HOM05D000977 ORTHO05D001094 7.2e-17 90.5 89 53.9
C03p78210 Brassica napus HOM05D000977 ORTHO05D001094 2.8e-16 88.6 80 56.2
A09p30030 Brassica napus HOM05D000977 ORTHO05D001094 3.6e-16 88.2 86 50.0
C09p27140 Brassica napus HOM05D000977 ORTHO05D001094 1.4e-15 86.3 77 54.5
BcaB03g16512 Brassica carinata HOM05D000977 ORTHO05D001094 2.3e-15 85.5 93 44.1
BcaC02g09888 Brassica carinata HOM05D000977 ORTHO05D001094 3.0e-15 85.1 93 48.4
BolC4t25105H Brassica oleracea HOM05D000977 ORTHO05D001094 3.0e-15 85.1 93 48.4
C09p43120 Brassica napus HOM05D000977 ORTHO05D001094 5.2e-15 84.3 92 46.7
BolC9t57183H Brassica oleracea HOM05D000977 ORTHO05D001094 5.2e-15 84.3 92 46.7
BraA09t38566Z Brassica rapa HOM05D000977 ORTHO05D001094 6.8e-15 84.0 86 47.7
BcaC08g43667 Brassica carinata HOM05D000977 ORTHO05D001094 8.8e-15 83.6 93 47.3
BolC1t03673H Brassica oleracea HOM05D000977 ORTHO05D001094 3.4e-14 81.6 77 51.9
BcaC06g35928 Brassica carinata HOM05D000977 ORTHO05D001094 4.4e-14 81.3 80 50.0
BolC7t41395H Brassica oleracea HOM05D000977 ORTHO05D001094 4.4e-14 81.3 80 50.0
BolC8t50327H Brassica oleracea HOM05D000977 ORTHO05D001094 4.4e-14 81.3 77 50.6
BcaC04g20474 Brassica carinata HOM05D000977 ORTHO05D001094 5.7e-14 80.9 92 45.7
BcaC03g15596 Brassica carinata HOM05D000977 ORTHO05D001094 7.5e-14 80.5 92 43.5
A05p16280 Brassica napus HOM05D000977 ORTHO05D001094 9.8e-14 80.1 78 51.3
A06p02270 Brassica napus HOM05D000977 ORTHO05D001094 9.8e-14 80.1 78 51.3
C01p42310 Brassica napus HOM05D000977 ORTHO05D001094 9.8e-14 80.1 78 51.3
C03p54170 Brassica napus HOM05D000977 ORTHO05D001094 9.8e-14 80.1 78 51.3
BcaC04g23591 Brassica carinata HOM05D000977 ORTHO05D001094 1.3e-13 79.7 78 51.3
BcaC08g42986 Brassica carinata HOM05D000977 ORTHO05D001094 1.3e-13 79.7 78 51.3
BcaC08g43369 Brassica carinata HOM05D000977 ORTHO05D001094 1.3e-13 79.7 78 51.3
C06p02270 Brassica napus HOM05D000977 ORTHO05D001094 1.3e-13 79.7 78 51.3
BolC9t55635H Brassica oleracea HOM05D000977 ORTHO05D001094 1.3e-13 79.7 78 51.3
BcaC07g37500 Brassica carinata HOM05D000977 ORTHO05D001094 1.7e-13 79.3 78 51.3
BolC9t56600H Brassica oleracea HOM05D000977 ORTHO05D001094 2.2e-13 79.0 93 45.2
BcaC06g35604 Brassica carinata HOM05D000977 ORTHO05D001094 3.7e-13 78.2 72 52.8
BcaC01g02182 Brassica carinata HOM05D000977 ORTHO05D001094 6.3e-13 77.4 77 50.6
BcaC08g44209 Brassica carinata HOM05D000977 ORTHO05D001094 6.3e-13 77.4 92 42.4
BcaC08g44361 Brassica carinata HOM05D000977 ORTHO05D001094 6.3e-13 77.4 92 42.4
BcaB06g27279 Brassica carinata HOM05D000977 ORTHO05D001094 1.1e-12 76.6 91 42.9
BcaC01g00337 Brassica carinata HOM05D000977 ORTHO05D001094 1.1e-12 76.6 78 50.0
C06p07370 Brassica napus HOM05D000977 ORTHO05D001094 1.8e-12 75.9 79 49.4
BolC1t04517H Brassica oleracea HOM05D000977 ORTHO05D001094 2.4e-12 75.5 82 47.6
BolSC21t60291H Brassica oleracea HOM05D000977 ORTHO05D001094 3.1e-12 75.1 73 52.1
Sp4g06570 Schrenkiella parvula HOM05D000977 ORTHO05D001094 3.1e-12 75.1 72 50.0
BcaB01g02120 Brassica carinata HOM05D000977 ORTHO05D001094 4.1e-12 74.7 42 83.3
BcaC06g33769 Brassica carinata HOM05D000977 ORTHO05D001094 2.7e-11 72.0 78 48.7
BolC4t27564H Brassica oleracea HOM05D000977 ORTHO05D001094 2.7e-11 72.0 73 49.3
BolC8t47282H Brassica oleracea HOM05D000977 ORTHO05D001094 2.7e-11 72.0 84 47.6
BcaC09g49373 Brassica carinata HOM05D009676 ORTHO05D014479 3.5e-11 71.6 77 46.8
BolC5t31974H Brassica oleracea HOM05D000977 ORTHO05D001094 5.9e-11 70.9 88 40.9
BcaB06g28518 Brassica carinata HOM05D000977 ORTHO05D001094 7.8e-11 70.5 92 42.4
BcaC03g14983 Brassica carinata HOM05D000977 ORTHO05D001094 7.8e-11 70.5 78 46.2
BcaC02g11716 Brassica carinata HOM05D000977 ORTHO05D001094 1.0e-10 70.1 71 52.1
BcaB08g35410 Brassica carinata HOM05D000977 ORTHO05D001094 1.3e-10 69.7 81 43.2
BcaC09g48826 Brassica carinata HOM05D000977 ORTHO05D001094 2.9e-10 68.6 78 47.4
C06p04110 Brassica napus HOM05D000977 ORTHO05D001094 2.9e-10 68.6 51 60.8
Thhalv10000524m.g Eutrema salsugineum HOM05D000977 ORTHO05D001094 3.8e-10 68.2 92 38.0
BolC1t02514H Brassica oleracea HOM05D000977 ORTHO05D001094 5.0e-10 67.8 51 60.8
Thhalv10000631m.g Eutrema salsugineum HOM05D000977 ORTHO05D001094 5.0e-10 67.8 79 41.8
Thhalv10002232m.g Eutrema salsugineum HOM05D000977 ORTHO05D001094 6.6e-10 67.4 79 40.5
A04p14250 Brassica napus HOM05D000977 ORTHO05D001094 8.6e-10 67.0 58 58.6
C04p44910 Brassica napus HOM05D000977 ORTHO05D001094 8.6e-10 67.0 58 58.6
BcaB01g05060 Brassica carinata HOM05D000977 ORTHO05D001094 1.1e-09 66.6 56 58.9
BolC2t08846H Brassica oleracea HOM05D000977 ORTHO05D001094 1.1e-09 66.6 76 43.4
BolC6t36171H Brassica oleracea HOM05D000977 ORTHO05D001094 1.1e-09 66.6 58 58.6
BolC3t19702H Brassica oleracea HOM05D000977 ORTHO05D001094 1.5e-09 66.2 84 46.4
Thhalv10000674m.g Eutrema salsugineum HOM05D000977 ORTHO05D001094 1.5e-09 66.2 92 38.0
AL5G27080 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 2.5e-09 65.5 93 37.6
BcaC09g50384 Brassica carinata HOM05D000977 ORTHO05D001094 2.5e-09 65.5 65 56.9
BcaC04g22822 Brassica carinata HOM05D000977 ORTHO05D001094 3.3e-09 65.1 91 37.4
BcaC05g26252 Brassica carinata HOM05D015975 ORTHO05D017588 4.3e-09 64.7 55 58.2
AL1G30000 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 5.6e-09 64.3 93 36.6
AL1G57050 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 5.6e-09 64.3 93 36.6
AL1G58560 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 5.6e-09 64.3 93 36.6
AL1G58670 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 5.6e-09 64.3 93 36.6
AL4G20020 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 5.6e-09 64.3 93 36.6
AL5G16890 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 5.6e-09 64.3 93 36.6
BcaB06g28651 Brassica carinata HOM05D000977 ORTHO05D001094 5.6e-09 64.3 76 36.8
Thhalv10012268m.g Eutrema salsugineum HOM05D000977 ORTHO05D001094 5.6e-09 64.3 91 41.8
BcaC07g37597 Brassica carinata HOM05D000977 ORTHO05D001094 1.2e-08 63.2 86 38.4
BcaB05g22284 Brassica carinata HOM05D000977 ORTHO05D001094 1.6e-08 62.8 55 49.1
BcaC04g21434 Brassica carinata HOM05D000977 ORTHO05D001094 2.1e-08 62.4 79 38.0
Thhalv10002788m.g Eutrema salsugineum HOM05D000977 ORTHO05D001094 2.1e-08 62.4 91 40.7
BcaC08g44291 Brassica carinata HOM05D000977 ORTHO05D001094 3.6e-08 61.6 76 38.2
BcaC05g27348 Brassica carinata HOM05D000977 ORTHO05D001094 4.7e-08 61.2 76 35.5
BcaC07g37010 Brassica carinata HOM05D000977 ORTHO05D001094 4.7e-08 61.2 76 36.8
Thhalv10027125m.g Eutrema salsugineum HOM05D000977 ORTHO05D001094 6.1e-08 60.8 87 39.1
BcaC05g28782 Brassica carinata HOM05D000977 ORTHO05D001094 8.0e-08 60.5 68 47.1
BolC8t47990H Brassica oleracea HOM05D000977 ORTHO05D001094 8.0e-08 60.5 79 34.2
Thhalv10027085m.g Eutrema salsugineum HOM05D000977 ORTHO05D001094 8.0e-08 60.5 87 37.9
AL8G14210 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 1.8e-07 59.3 77 39.0
BcaC05g28779 Brassica carinata HOM05D000977 ORTHO05D001094 2.3e-07 58.9 66 50.0
BcaC09g50777 Brassica carinata HOM05D000977 ORTHO05D001094 4.0e-07 58.2 76 34.2
BcaB02g11498 Brassica carinata HOM05D000977 ORTHO05D001094 1.2e-06 56.6 67 38.8
BcaC03g16184 Brassica carinata HOM05D000977 ORTHO05D001094 1.2e-06 56.6 76 34.2
BolC5t34129H Brassica oleracea HOM05D000977 ORTHO05D001094 1.5e-06 56.2 78 33.3
BcaB02g11549 Brassica carinata HOM05D000977 ORTHO05D001094 2.6e-06 55.5 64 45.3
BcaB07g33549 Brassica carinata HOM05D000977 ORTHO05D001094 2.6e-06 55.5 67 35.8
BcaC05g27597 Brassica carinata HOM05D000977 ORTHO05D001094 2.6e-06 55.5 91 37.4
BcaC01g01703 Brassica carinata HOM05D000977 ORTHO05D001094 3.4e-06 55.1 73 35.6
BcaNung06057 Brassica carinata HOM05D000977 ORTHO05D001094 3.4e-06 55.1 73 35.6
AT2G07190 Arabidopsis thaliana HOM05D000977 ORTHO05D001094 5.7e-06 54.3 76 36.8
BcaC09g49398 Brassica carinata HOM05D000977 ORTHO05D001094 5.7e-06 54.3 57 42.1
BcaC05g28638 Brassica carinata HOM05D000977 ORTHO05D001094 7.5e-06 53.9 76 34.2


User provided reference genes

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