Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g20072 Brassica carinata HOM05D000051 ORTHO05D000015 7.3e-46 186.8 90 100.0
BraA10t43485Z Brassica rapa HOM05D000051 ORTHO05D000015 2.7e-40 168.3 93 88.2
A10p13930 Brassica napus HOM05D000051 ORTHO05D000015 1.0e-39 166.4 93 88.2
C09p48160 Brassica napus HOM05D000051 ORTHO05D000015 4.3e-30 134.4 92 75.0
BolC9t57667H Brassica oleracea HOM05D000051 ORTHO05D000015 4.3e-30 134.4 92 75.0
BcaC03g14213 Brassica carinata HOM05D000051 ORTHO05D016723 1.3e-26 122.9 90 67.8
C02p15130 Brassica napus HOM05D000051 ORTHO05D000015 1.3e-26 122.9 90 67.8
BolC2t07630H Brassica oleracea HOM05D000051 ORTHO05D000015 1.3e-26 122.9 90 67.8
Thhalv10015809m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.4e-25 119.4 92 63.0
AL8G32380 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 3.2e-25 118.2 92 62.0
AT5G56560 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 3.2e-25 118.2 92 63.0
C03p15580 Brassica napus HOM05D000051 ORTHO05D000015 1.6e-24 115.9 92 62.0
A02p09000 Brassica napus HOM05D000051 ORTHO05D000015 2.1e-24 115.5 92 63.0
BraA02t05969Z Brassica rapa HOM05D000051 ORTHO05D000015 4.6e-24 114.4 90 63.3
Carub.0008s1704 Capsella rubella HOM05D000051 ORTHO05D000015 4.3e-22 107.8 92 58.7
BolC3t13995H Brassica oleracea HOM05D000051 ORTHO05D000015 7.3e-22 107.1 92 58.7
A03p13020 Brassica napus HOM05D000051 ORTHO05D000015 2.8e-21 105.1 92 57.6
A03p13310 Brassica napus HOM05D000051 ORTHO05D000015 4.7e-21 104.4 90 57.8
BraA03t10643Z Brassica rapa HOM05D000051 ORTHO05D000015 4.7e-21 104.4 90 57.8
BolC3t13961H Brassica oleracea HOM05D000051 ORTHO05D000015 3.1e-20 101.7 92 55.4
BcaC01g06461 Brassica carinata HOM05D000051 ORTHO05D000015 4.0e-20 101.3 92 55.4
C03p15200 Brassica napus HOM05D000051 ORTHO05D000015 4.0e-20 101.3 92 55.4
BcaC01g06432 Brassica carinata HOM05D000051 ORTHO05D016723 1.3e-18 96.3 90 54.4
A02p08990 Brassica napus HOM05D000051 ORTHO05D000015 1.3e-18 96.3 92 55.4
BraA02t05968Z Brassica rapa HOM05D000051 ORTHO05D000015 8.4e-18 93.6 92 54.3
CARHR270260 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.4e-17 92.8 94 55.3
BcaC03g14212 Brassica carinata HOM05D000051 ORTHO05D000015 2.1e-16 89.0 92 53.3
C02p15120 Brassica napus HOM05D000051 ORTHO05D000015 2.1e-16 89.0 92 53.3
BolC2t07629H Brassica oleracea HOM05D000051 ORTHO05D000015 2.1e-16 89.0 92 53.3
AL7G42890 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.3e-15 86.3 92 51.1
BcaB07g33610 Brassica carinata HOM05D000051 ORTHO05D000015 1.7e-15 85.9 88 48.9
BcaB07g33542 Brassica carinata HOM05D000051 ORTHO05D000015 1.1e-14 83.2 88 47.7
Thhalv10016046m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.1e-14 83.2 94 53.2
BcaNung06773 Brassica carinata HOM05D000051 ORTHO05D000015 5.6e-14 80.9 88 50.0
BraA06t23483Z Brassica rapa HOM05D000051 ORTHO05D000015 9.6e-14 80.1 88 46.6
A06p02760 Brassica napus HOM05D000051 ORTHO05D000015 2.1e-13 79.0 88 46.6
Thhalv10015652m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.4e-12 76.3 93 44.1
Carub.0008s1705 Capsella rubella HOM05D000051 ORTHO05D000015 4.0e-12 74.7 93 39.8
AT1G32375 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 6.9e-12 73.9 95 42.1
CARHR271030 Cardamine hirsuta HOM05D000051 ORTHO05D000015 9.0e-12 73.6 89 47.2
Thhalv10029438m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 9.0e-12 73.6 92 41.3
AT5G56800 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 2.0e-11 72.4 82 47.6
BcaB01g04408 Brassica carinata HOM05D000051 ORTHO05D000015 2.0e-11 72.4 45 68.9
CARHR041040 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.0e-11 72.4 91 48.4
CARHR270250 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.6e-11 72.0 90 47.8
AL1G58820 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 3.4e-11 71.6 90 43.3
AT5G56570 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 4.4e-11 71.2 84 40.5
Carub.0007s2887 Capsella rubella HOM05D000051 ORTHO05D000015 5.8e-11 70.9 92 44.6
CARHR031770 Cardamine hirsuta HOM05D000051 ORTHO05D000015 9.9e-11 70.1 95 40.0
CARHR270560 Cardamine hirsuta HOM05D000051 ORTHO05D000015 9.9e-11 70.1 88 45.5
CARHR041060 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.3e-10 69.7 90 43.3
AL8G32390 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.7e-10 69.3 84 39.3
AL8G32110 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.2e-10 68.9 92 39.1
Thhalv10023981m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.2e-10 68.9 58 62.1
AL1G58790 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 4.9e-10 67.8 90 41.1
Thhalv10013717m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 6.4e-10 67.4 92 38.0
CARHR204270 Cardamine hirsuta HOM05D000051 ORTHO05D000015 8.4e-10 67.0 90 42.2
Carub.0001s3995 Capsella rubella HOM05D000051 ORTHO05D000015 1.4e-09 66.2 92 44.6
CARHR041050 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.4e-09 66.2 90 40.0
Thhalv10015986m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.9e-09 65.9 94 44.7
Carub.0001s3076 Capsella rubella HOM05D000051 ORTHO05D000015 4.2e-09 64.7 95 36.8
CARHR148020 Cardamine hirsuta HOM05D000051 ORTHO05D000015 5.4e-09 64.3 86 44.2
AT1G51055 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 9.3e-09 63.5 90 41.1
CARHR031780 Cardamine hirsuta HOM05D000051 ORTHO05D000015 9.3e-09 63.5 93 40.9
Thhalv10015273m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 9.3e-09 63.5 80 48.8
BcaB01g02570 Brassica carinata HOM05D000051 ORTHO05D000015 2.7e-08 62.0 95 36.8
Carub.0008s1682 Capsella rubella HOM05D000051 ORTHO05D000015 2.7e-08 62.0 81 39.5
C07p04350 Brassica napus HOM05D000051 ORTHO05D000015 3.5e-08 61.6 82 40.2
CARHR269930 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.5e-08 61.6 87 39.1
Thhalv10028200m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.5e-08 61.6 81 40.7
AT3G26920 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 4.6e-08 61.2 90 43.3
Thhalv10015827m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 6.0e-08 60.8 89 38.2
BcaB01g00264 Brassica carinata HOM05D000051 ORTHO05D000015 7.8e-08 60.5 77 36.4
BcaC01g06417 Brassica carinata HOM05D000051 ORTHO05D000015 7.8e-08 60.5 83 42.2
CARHR269730 Cardamine hirsuta HOM05D000051 ORTHO05D000015 7.8e-08 60.5 94 38.3
CARHR270020 Cardamine hirsuta HOM05D000051 ORTHO05D000015 7.8e-08 60.5 89 34.8
Thhalv10003402m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 7.8e-08 60.5 80 37.5
BcaC06g36412 Brassica carinata HOM05D000051 ORTHO05D000015 1.0e-07 60.1 82 39.0
C08p28890 Brassica napus HOM05D000051 ORTHO05D000015 1.0e-07 60.1 77 35.1
Carub.0008s1678 Capsella rubella HOM05D000051 ORTHO05D000015 1.0e-07 60.1 93 35.5
Sp6g18220 Schrenkiella parvula HOM05D000051 ORTHO05D000015 1.0e-07 60.1 92 37.0
THA.LOC104811717 Tarenaya hassleriana HOM05D000051 ORTHO05D000015 1.0e-07 60.1 92 37.0
CARHR269740 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.3e-07 59.7 92 38.0
A04p11540 Brassica napus HOM05D000051 ORTHO05D000015 1.7e-07 59.3 82 39.0
BraA04t16819Z Brassica rapa HOM05D000051 ORTHO05D000015 1.7e-07 59.3 82 39.0
Thhalv10013624m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.7e-07 59.3 86 36.0
Carub.0005s0503 Capsella rubella HOM05D000051 ORTHO05D000015 2.3e-07 58.9 94 36.2
Aa31LG3G5180 Aethionema arabicum HOM05D000051 ORTHO05D000015 3.0e-07 58.5 82 40.2
AL8G32100 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 3.0e-07 58.5 93 34.4
A02p09160 Brassica napus HOM05D000051 ORTHO05D000015 3.0e-07 58.5 92 33.7
C02p15320 Brassica napus HOM05D000051 ORTHO05D000015 3.0e-07 58.5 92 34.8
BolC2t07648H Brassica oleracea HOM05D000051 ORTHO05D000015 3.0e-07 58.5 92 34.8
BraA02t05983Z Brassica rapa HOM05D000051 ORTHO05D000015 3.0e-07 58.5 92 33.7
Thhalv10015540m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.0e-07 58.5 92 35.9
BolC9t57625H Brassica oleracea HOM05D000051 ORTHO05D000015 3.9e-07 58.2 90 36.7
Thhalv10022347m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.9e-07 58.2 80 36.2
Aa31LG3G3830 Aethionema arabicum HOM05D000051 ORTHO05D000015 5.1e-07 57.8 82 42.7
Aa31LG3G5160 Aethionema arabicum HOM05D000051 ORTHO05D000015 5.1e-07 57.8 82 39.0
AL5G34470 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 5.1e-07 57.8 77 36.4
BcaC02g09153 Brassica carinata HOM05D000051 ORTHO05D000015 5.1e-07 57.8 79 41.8
A03p18600 Brassica napus HOM05D000051 ORTHO05D000015 5.1e-07 57.8 93 38.7
A04p06040 Brassica napus HOM05D000051 ORTHO05D000015 5.1e-07 57.8 79 41.8
C04p39010 Brassica napus HOM05D000051 ORTHO05D000015 5.1e-07 57.8 79 41.8
BolC4t25471H Brassica oleracea HOM05D000051 ORTHO05D000015 5.1e-07 57.8 79 41.8
BraA04t16308Z Brassica rapa HOM05D000051 ORTHO05D000015 5.1e-07 57.8 79 41.8
BraA04t16288Z Brassica rapa HOM05D000051 ORTHO05D000015 6.6e-07 57.4 83 41.0
BraA10t43468Z Brassica rapa HOM05D000051 ORTHO05D000015 6.6e-07 57.4 90 36.7
Thhalv10027331m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 6.6e-07 57.4 82 35.4
Thhalv10028103m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 6.6e-07 57.4 94 36.2
Sp3g31850 Schrenkiella parvula HOM05D000051 ORTHO05D000015 6.6e-07 57.4 82 37.8
BcaB05g22294 Brassica carinata HOM05D000051 ORTHO05D000015 8.7e-07 57.0 92 40.2
BcaB06g27237 Brassica carinata HOM05D000051 ORTHO05D000015 8.7e-07 57.0 81 39.5
BcaC03g14202 Brassica carinata HOM05D000051 ORTHO05D000015 8.7e-07 57.0 92 41.3
C02p14880 Brassica napus HOM05D000051 ORTHO05D000015 8.7e-07 57.0 92 41.3
BraA03t10659Z Brassica rapa HOM05D000051 ORTHO05D000038 8.7e-07 57.0 67 43.3
Thhalv10016035m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 8.7e-07 57.0 79 41.8
AT3G50710 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.1e-06 56.6 90 38.9
A10p13710 Brassica napus HOM05D000051 ORTHO05D000015 1.1e-06 56.6 90 36.7
C03p15830 Brassica napus HOM05D000051 ORTHO05D000038 1.1e-06 56.6 56 46.4
Carub.0001s3275 Capsella rubella HOM05D000051 ORTHO05D000015 1.1e-06 56.6 81 39.5
CARHR129080 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.1e-06 56.6 89 36.0
Thhalv10015738m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.1e-06 56.6 84 40.5
Sp1g38380 Schrenkiella parvula HOM05D000051 ORTHO05D000015 1.1e-06 56.6 93 36.6
AL8G31960 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.5e-06 56.2 85 37.6
BcaC07g39717 Brassica carinata HOM05D000051 ORTHO05D000015 1.5e-06 56.2 78 37.2
A02p08920 Brassica napus HOM05D000051 ORTHO05D000015 1.5e-06 56.2 92 41.3
A03p13460 Brassica napus HOM05D000051 ORTHO05D000015 1.5e-06 56.2 79 41.8
C09p14210 Brassica napus HOM05D000051 ORTHO05D000015 1.5e-06 56.2 74 39.2
BolC3t14013H Brassica oleracea HOM05D000082 ORTHO05D000038 1.5e-06 56.2 67 43.3
BolC8t50491H Brassica oleracea HOM05D000051 ORTHO05D000015 1.5e-06 56.2 78 37.2
BraA02t05961Z Brassica rapa HOM05D000051 ORTHO05D000015 1.5e-06 56.2 92 41.3
THA.LOC104817871 Tarenaya hassleriana HOM05D000051 ORTHO05D000015 1.5e-06 56.2 88 34.1
A03p13540 Brassica napus HOM05D000051 ORTHO05D000038 1.9e-06 55.8 65 41.5
A03p30200 Brassica napus HOM05D000051 ORTHO05D000015 1.9e-06 55.8 87 36.8
BraA03t10604Z Brassica rapa HOM05D000051 ORTHO05D000015 1.9e-06 55.8 81 39.5
Carub.0001s3991 Capsella rubella HOM05D000051 ORTHO05D000015 1.9e-06 55.8 78 43.6
CARHR175950 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.9e-06 55.8 82 36.6
Thhalv10013763m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.9e-06 55.8 90 35.6
Sp7g03470 Schrenkiella parvula HOM05D000051 ORTHO05D000015 1.9e-06 55.8 81 40.7
THA.LOC104817865 Tarenaya hassleriana HOM05D000051 ORTHO05D000015 1.9e-06 55.8 89 33.7
C04p45280 Brassica napus HOM05D000051 ORTHO05D000015 2.5e-06 55.5 81 38.3
BolC4t26111H Brassica oleracea HOM05D000051 ORTHO05D000015 2.5e-06 55.5 81 38.3
BolC9t54319H Brassica oleracea HOM05D000051 ORTHO05D000015 2.5e-06 55.5 74 39.2
Carub.0007s3593 Capsella rubella HOM05D000051 ORTHO05D000015 2.5e-06 55.5 93 33.3
Thhalv10015747m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.5e-06 55.5 85 35.3
Aa31LG3G3930 Aethionema arabicum HOM05D000051 ORTHO05D000015 3.3e-06 55.1 80 37.5
A03p13450 Brassica napus HOM05D000051 ORTHO05D000015 3.3e-06 55.1 90 36.7
C03p15750 Brassica napus HOM05D000051 ORTHO05D000015 3.3e-06 55.1 90 36.7
C03p36450 Brassica napus HOM05D000051 ORTHO05D000015 3.3e-06 55.1 89 36.0
BolC3t15957H Brassica oleracea HOM05D000051 ORTHO05D000015 3.3e-06 55.1 89 36.0
CARHR269880 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.3e-06 55.1 86 36.0
CARHR270090 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.3e-06 55.1 79 40.5
Thhalv10027746m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.3e-06 55.1 86 37.2
Thhalv10028666m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.3e-06 55.1 92 39.1
BcaC07g39873 Brassica carinata HOM05D000051 ORTHO05D000015 4.3e-06 54.7 83 39.8
C03p15840 Brassica napus HOM05D000051 ORTHO05D000015 4.3e-06 54.7 75 40.0
BolC3t14015H Brassica oleracea HOM05D000051 ORTHO05D000015 4.3e-06 54.7 75 40.0
BolC3t14255H Brassica oleracea HOM05D000051 ORTHO05D000015 4.3e-06 54.7 86 37.2
BolC8t50700H Brassica oleracea HOM05D000051 ORTHO05D000015 4.3e-06 54.7 83 39.8
BraA03t10652Z Brassica rapa HOM05D000051 ORTHO05D000015 4.3e-06 54.7 80 42.5
CARHR270080 Cardamine hirsuta HOM05D000051 ORTHO05D000015 4.3e-06 54.7 82 37.8
Thhalv10011126m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 4.3e-06 54.7 84 35.7
AT4G10420 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 5.6e-06 54.3 80 37.5
BcaC08g43935 Brassica carinata HOM05D000051 ORTHO05D000015 5.6e-06 54.3 91 36.3
A03p13550 Brassica napus HOM05D000051 ORTHO05D000015 5.6e-06 54.3 78 39.7
C03p15390 Brassica napus HOM05D000051 ORTHO05D000015 5.6e-06 54.3 76 42.1
BraA03t10660Z Brassica rapa HOM05D000051 ORTHO05D000015 5.6e-06 54.3 78 39.7
Thhalv10027767m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 5.6e-06 54.3 85 38.8
Sp6g18540 Schrenkiella parvula HOM05D000051 ORTHO05D000015 5.6e-06 54.3 70 40.0
AT1G05080 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 7.3e-06 53.9 80 37.5
A02p09150 Brassica napus HOM05D000051 ORTHO05D000015 7.3e-06 53.9 59 42.4
CARHR269990 Cardamine hirsuta HOM05D000051 ORTHO05D000015 7.3e-06 53.9 93 34.4
Thhalv10012401m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 7.3e-06 53.9 80 38.8
Aa31LG3G3950 Aethionema arabicum HOM05D000051 ORTHO05D000015 9.6e-06 53.5 80 36.2
AT3G53550 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 9.6e-06 53.5 77 31.2
BcaB04g18622 Brassica carinata HOM05D000051 ORTHO05D000015 9.6e-06 53.5 94 35.1
BraA02t05981Z Brassica rapa HOM05D000051 ORTHO05D000015 9.6e-06 53.5 61 41.0
Carub.0001s0436 Capsella rubella HOM05D000051 ORTHO05D000015 9.6e-06 53.5 84 35.7
Carub.0005s1911 Capsella rubella HOM05D000051 ORTHO05D000015 9.6e-06 53.5 82 42.7


User provided reference genes

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