Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 1.8e-92 342.4 161 100.0
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 2.4e-92 342.0 161 99.4
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 9.2e-92 340.1 161 98.8
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 9.2e-92 340.1 161 98.8
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 2.0e-91 339.0 161 98.8
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 2.0e-91 339.0 161 98.1
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 2.7e-91 338.6 161 97.5
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 5.9e-91 337.4 161 97.5
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 2.3e-90 335.5 161 96.3
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 6.6e-90 334.0 169 94.7
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 3.3e-89 331.6 167 94.6
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 5.6e-89 330.9 161 94.4
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 2.8e-88 328.6 161 95.0
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 2.0e-78 295.8 161 82.0
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 3.7e-77 291.6 162 82.1
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 1.1e-76 290.0 161 78.9
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 9.2e-76 287.0 161 77.6
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 1.2e-75 286.6 161 78.3
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 1.2e-75 286.6 161 78.9
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 2.1e-75 285.8 162 80.2
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 3.5e-75 285.0 162 80.2
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 3.5e-75 285.0 160 76.2
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 7.8e-75 283.9 161 75.8
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 7.8e-75 283.9 161 76.4
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 1.3e-74 283.1 161 76.4
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 1.3e-74 283.1 156 80.8
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 1.7e-74 282.7 161 77.0
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 1.7e-74 282.7 154 79.9
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 2.3e-74 282.3 159 77.4
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 3.9e-74 281.6 148 84.5
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 3.9e-74 281.6 161 74.5
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 5.1e-74 281.2 158 77.2
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 5.1e-74 281.2 161 76.4
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 6.6e-74 280.8 159 78.6
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 6.6e-74 280.8 159 78.6
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 6.6e-74 280.8 161 77.6
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 8.6e-74 280.4 161 77.0
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 2.5e-73 278.9 159 78.0
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 2.5e-73 278.9 159 75.5
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 4.3e-73 278.1 158 75.9
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 5.6e-73 277.7 158 75.3
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 5.6e-73 277.7 161 75.2
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 7.3e-73 277.3 158 75.9
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 7.3e-73 277.3 159 74.2
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 1.2e-72 276.6 158 75.3
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 1.2e-72 276.6 161 75.8
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.2e-72 276.6 161 77.0
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 1.6e-72 276.2 161 74.5
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 1.6e-72 276.2 158 75.3
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 2.1e-72 275.8 158 75.3
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 2.1e-72 275.8 160 74.4
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 2.1e-72 275.8 161 75.2
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 2.8e-72 275.4 161 77.0
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 3.6e-72 275.0 160 75.0
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 4.7e-72 274.6 158 77.2
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 4.7e-72 274.6 158 77.2
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 4.7e-72 274.6 158 77.2
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 6.2e-72 274.2 152 78.3
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 6.2e-72 274.2 154 77.9
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 8.1e-72 273.9 161 75.2
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 8.1e-72 273.9 161 75.2
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 8.1e-72 273.9 162 76.5
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 1.1e-71 273.5 161 74.5
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 1.1e-71 273.5 158 75.9
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 1.8e-71 272.7 154 77.9
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 1.8e-71 272.7 161 73.9
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 1.8e-71 272.7 155 76.1
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 2.4e-71 272.3 161 73.9
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 2.4e-71 272.3 161 73.9
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 3.1e-71 271.9 161 73.9
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 5.2e-71 271.2 161 75.8
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 1.5e-70 269.6 162 73.5
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 3.4e-70 268.5 152 78.3
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 4.4e-70 268.1 161 72.0
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 4.4e-70 268.1 161 73.9
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 7.6e-70 267.3 157 73.2
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 9.9e-70 266.9 161 73.9
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 9.9e-70 266.9 161 75.2
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 1.3e-69 266.5 158 73.4
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 2.9e-69 265.4 152 75.7
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 6.4e-69 264.2 161 69.6
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 6.4e-69 264.2 161 73.3
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.4e-68 263.1 161 68.9
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 1.9e-68 262.7 160 75.0
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 4.1e-68 261.5 155 73.5
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 9.2e-68 260.4 162 71.0
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 1.2e-67 260.0 158 71.5
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 1.7e-66 256.1 155 71.6
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 8.6e-66 253.8 161 73.9
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 1.1e-65 253.4 214 55.1
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 2.5e-65 252.3 162 68.5
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 4.3e-65 251.5 161 71.4
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 7.3e-65 250.8 148 77.0
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 2.8e-64 248.8 156 70.5
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 1.8e-63 246.1 149 71.1
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 2.0e-62 242.7 135 78.5
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 3.4e-62 241.9 138 76.8
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 3.8e-61 238.4 155 67.7
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 1.4e-60 236.5 135 75.6
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.9e-60 236.1 135 74.8
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 1.2e-59 233.4 138 73.2
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 7.8e-59 230.7 138 74.6
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 9.6e-57 223.8 151 69.5
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 1.4e-55 219.9 117 82.1
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 1.7e-53 213.0 121 74.4
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 4.2e-52 208.4 183 57.4
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 7.1e-52 207.6 141 63.1
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 3.5e-51 205.3 157 70.7
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 6.0e-51 204.5 140 65.0
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 1.3e-50 203.4 116 76.7
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 1.3e-50 203.4 114 77.2
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 1.3e-50 203.4 153 58.2
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 5.1e-50 201.4 141 61.7
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 3.3e-49 198.7 115 76.5
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 4.8e-48 194.9 160 60.0
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 1.5e-46 189.9 114 72.8
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 3.4e-46 188.7 105 77.1
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 3.8e-45 185.3 138 60.1
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 8.4e-45 184.1 96 81.2
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 1.4e-44 183.3 95 83.2
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 4.3e-41 171.8 100 74.0
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 8.4e-37 157.5 85 84.7
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 2.5e-36 156.0 132 57.6
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 3.9e-34 148.7 135 54.8
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 1.9e-33 146.4 86 76.7
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 3.2e-28 129.0 73 79.5
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 1.1e-23 114.0 60 90.0
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 1.4e-18 97.1 52 75.0
C02p14450 Brassica napus HOM05D006321 ORTHO05D007929 1.4e-15 87.0 71 63.4


User provided reference genes

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