Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g19974 Brassica carinata HOM05D041973 ORTHO05D032072 1.6e-31 138.7 64 100.0
BcaC05g27805 Brassica carinata HOM05D041973 ORTHO05D032072 1.2e-23 112.5 62 82.3
BolC9t57774H Brassica oleracea HOM05D041973 ORTHO05D032072 1.4e-22 109.0 50 100.0
BcaC04g23077 Brassica carinata HOM05D000230 ORTHO05D000176 3.0e-09 64.7 42 78.6
A09p10430 Brassica napus HOM05D000230 ORTHO05D000176 3.0e-09 64.7 42 78.6
C09p12370 Brassica napus HOM05D000230 ORTHO05D000176 3.0e-09 64.7 42 78.6
BolC9t54131H Brassica oleracea HOM05D000230 ORTHO05D000176 3.0e-09 64.7 42 78.6
BraA09t36689Z Brassica rapa HOM05D000230 ORTHO05D000176 3.0e-09 64.7 42 78.6
Aa31LG8G12320 Aethionema arabicum HOM05D000230 ORTHO05D000176 8.6e-09 63.2 42 76.2
AL3G45540 Arabidopsis lyrata HOM05D000230 ORTHO05D000176 8.6e-09 63.2 42 76.2
AT2G13680 Arabidopsis thaliana HOM05D000230 ORTHO05D000176 8.6e-09 63.2 42 76.2
BcaB02g11528 Brassica carinata HOM05D000230 ORTHO05D000176 8.6e-09 63.2 42 76.2
Carub.0003s2817 Capsella rubella HOM05D000230 ORTHO05D000176 8.6e-09 63.2 42 76.2
Thhalv10022518m.g Eutrema salsugineum HOM05D000230 ORTHO05D000176 8.6e-09 63.2 42 76.2
Sp3g27070 Schrenkiella parvula HOM05D000230 ORTHO05D000176 8.6e-09 63.2 42 76.2
CARHR104750 Cardamine hirsuta HOM05D000230 ORTHO05D000176 2.5e-08 61.6 42 73.8
THA.LOC104807157 Tarenaya hassleriana HOM05D000230 ORTHO05D000176 2.5e-08 61.6 42 73.8


User provided reference genes

Program Settings