Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g19805 Brassica carinata HOM05D003281 ORTHO05D004128 5.4e-127 457.6 221 100.0
C09p51540 Brassica napus HOM05D003281 ORTHO05D004128 1.8e-61 240.0 125 93.6
BolC9t58011H Brassica oleracea HOM05D003281 ORTHO05D004128 1.8e-61 240.0 125 93.6
BolC9t58009H Brassica oleracea HOM05D003281 ORTHO05D004128 7.2e-47 191.4 104 88.5
A05p32240 Brassica napus HOM05D003281 ORTHO05D004128 5.9e-41 171.8 106 84.0
C09p51500 Brassica napus HOM05D003281 ORTHO05D004128 1.6e-38 163.7 152 63.8
A05p10660 Brassica napus HOM05D003281 ORTHO05D004128 2.2e-35 153.3 90 85.6
C04p13760 Brassica napus HOM05D003281 ORTHO05D004128 2.2e-35 153.3 90 85.6
THA.LOC104798558 Tarenaya hassleriana HOM05D003281 ORTHO05D004128 2.2e-35 153.3 90 85.6
BolC4t22966H Brassica oleracea HOM05D003281 ORTHO05D004128 2.9e-35 152.9 90 85.6
Thhalv10016407m.g Eutrema salsugineum HOM05D003281 ORTHO05D004128 8.3e-35 151.4 92 82.6
AL4G31070 Arabidopsis lyrata HOM05D003281 ORTHO05D004128 1.1e-34 151.0 90 84.4
AT2G35040 Arabidopsis thaliana HOM05D003281 ORTHO05D004128 1.1e-34 151.0 90 84.4
BcaB02g09485 Brassica carinata HOM05D003281 ORTHO05D004128 1.1e-34 151.0 90 84.4
BraA05t20007Z Brassica rapa HOM05D003281 ORTHO05D004128 1.1e-34 151.0 90 84.4
CARHR129210 Cardamine hirsuta HOM05D003281 ORTHO05D004128 1.1e-34 151.0 90 84.4
Aa31LG9G16170 Aethionema arabicum HOM05D003281 ORTHO05D004128 1.4e-34 150.6 88 86.4
THA.LOC104814352 Tarenaya hassleriana HOM05D003281 ORTHO05D004128 2.4e-34 149.8 90 84.4
BcaC02g11585 Brassica carinata HOM05D003281 ORTHO05D004128 7.0e-34 148.3 90 83.3
Carub.0004s1674 Capsella rubella HOM05D003281 ORTHO05D004128 1.2e-33 147.5 90 83.3
A04p28850 Brassica napus HOM05D003281 ORTHO05D004128 1.7e-32 143.7 215 44.7
BraA09t41745Z Brassica rapa HOM05D003281 ORTHO05D004128 1.1e-31 141.0 131 58.8
COL.COLO4_17637 Corchorus olitorius HOM05D003281 ORTHO05D004128 1.5e-31 140.6 91 75.8
Ciclev10014669m.g Citrus clementina HOM05D003281 ORTHO05D004128 7.3e-31 138.3 91 74.7
Ca_18076_v3 Cicer arietinum L. HOM05D003281 ORTHO05D004128 9.5e-31 137.9 91 74.7
SGA_v2.0_scaffold254G45247 Striga asiatica HOM05D003281 ORTHO05D004128 1.6e-30 137.1 91 73.6
Nn7g38195 Nelumbo nucifera HOM05D003281 ORTHO05D004128 2.1e-30 136.7 91 73.6
Phvul.005G018700 Phaseolus vulgaris HOM05D003281 ORTHO05D004128 2.1e-30 136.7 129 56.6
Atru.chr10.431 Acer truncatum HOM05D003281 ORTHO05D004128 3.6e-30 136.0 92 72.8
MSTRG.16470 Avicennia marina HOM05D003281 ORTHO05D004128 3.6e-30 136.0 91 74.7
Cpa.g.sc30.140 Carica papaya HOM05D003281 ORTHO05D004128 3.6e-30 136.0 91 73.6
SalBow1G7114 Salvia bowleyana HOM05D003281 ORTHO05D004128 3.6e-30 136.0 91 73.6
SGA_v2.0_scaffold202G41492 Striga asiatica HOM05D003281 ORTHO05D004128 3.6e-30 136.0 91 72.5
TWI34G0807 Tripterygium wilfordii HOM05D003281 ORTHO05D004128 3.6e-30 136.0 91 72.5
Dinv18011 Davidia involucrata HOM05D003281 ORTHO05D004128 4.7e-30 135.6 91 72.5
Gorai.008G050100 Gossypium raimondii HOM05D003281 ORTHO05D004128 4.7e-30 135.6 91 71.4
Thecc.02G006200 Theobroma cacao HOM05D003281 ORTHO05D004128 4.7e-30 135.6 91 73.6
VMungo1080G1879 Vigna mungo HOM05D003281 ORTHO05D004128 4.7e-30 135.6 129 55.8
Duzib132G1085 Durio zibethinus HOM05D003281 ORTHO05D004128 6.2e-30 135.2 91 72.5
Hund10057 Selenicereus undatus HOM05D003281 ORTHO05D004128 6.2e-30 135.2 91 73.6
TAR626G1141 Trochodendron aralioides HOM05D003281 ORTHO05D004128 6.2e-30 135.2 91 72.5
ECA232G1899 Erigeron canadensis HOM05D003281 ORTHO05D004128 8.0e-30 134.8 91 71.4
Gohir.A01G124000 Gossypium hirsutum HOM05D003281 ORTHO05D004128 8.0e-30 134.8 88 75.0
Gohir.A12G048600 Gossypium hirsutum HOM05D003281 ORTHO05D004128 8.0e-30 134.8 88 75.0
EL10Ac1g01734 Beta vulgaris HOM05D003281 ORTHO05D004128 1.0e-29 134.4 91 70.3
Potri.010G114400 Populus trichocarpa HOM05D003281 ORTHO05D004128 1.0e-29 134.4 91 73.6
EL10Ac5g10906 Beta vulgaris HOM05D003281 ORTHO05D004128 1.4e-29 134.0 91 70.3
AUR62015011 Chenopodium quinoa HOM05D003281 ORTHO05D004128 1.4e-29 134.0 91 71.4
MELO3C002406.2 Cucumis melo HOM05D003281 ORTHO05D004128 1.4e-29 134.0 91 72.5
Gohir.D12G047400 Gossypium hirsutum HOM05D003281 ORTHO05D004128 1.4e-29 134.0 91 71.4
Gorai.002G136700 Gossypium raimondii HOM05D003281 ORTHO05D004128 1.4e-29 134.0 91 71.4
Lalb_Chr07g0189731 Lupinus albus HOM05D003281 ORTHO05D004128 1.4e-29 134.0 91 71.4
Dinv01965 Davidia involucrata HOM05D003281 ORTHO05D004128 1.8e-29 133.7 91 70.3
SalBow1G2706 Salvia bowleyana HOM05D003281 ORTHO05D004128 1.8e-29 133.7 91 72.5
AUR62034379 Chenopodium quinoa HOM05D003281 ORTHO05D004128 2.3e-29 133.3 91 70.3
Gohir.D01G111800 Gossypium hirsutum HOM05D003281 ORTHO05D004128 2.3e-29 133.3 91 71.4
Glyma.04G133100 Glycine max HOM05D003281 ORTHO05D004128 3.1e-29 132.9 91 71.4
Glyma.11G158400 Glycine max HOM05D003281 ORTHO05D004128 4.0e-29 132.5 129 55.8
Ah.01g022040 Amaranthus hybridus HOM05D003281 ORTHO05D004128 5.2e-29 132.1 91 71.4
Lj3g0002589 Lotus japonicus HOM05D003281 ORTHO05D004128 5.2e-29 132.1 126 55.6
FAN26G3221 Fragaria x ananassa HOM05D003281 ORTHO05D004128 6.8e-29 131.7 91 71.4
HanXRQChr13g0406911 Helianthus annuus HOM05D003281 ORTHO05D004128 6.8e-29 131.7 91 70.3
Peaxi162Scf00199g00516 Petunia axillaris HOM05D003281 ORTHO05D004128 6.8e-29 131.7 91 70.3
Sopen08g023790 Solanum pennellii HOM05D003281 ORTHO05D004128 8.9e-29 131.3 91 71.4
ClCG03G004230 Citrullus lanatus HOM05D003281 ORTHO05D004128 1.2e-28 131.0 91 71.4
CsaV3_1G010170 Cucumis sativus L. HOM05D003281 ORTHO05D004128 1.2e-28 131.0 91 71.4
Nitab4.5_0000443g0070 Nicotiana tabacum HOM05D003281 ORTHO05D004128 1.2e-28 131.0 91 70.3
Nitab4.5_0006246g0040 Nicotiana tabacum HOM05D003281 ORTHO05D004128 1.2e-28 131.0 91 70.3
Psat5g222920 Pisum sativum HOM05D003281 ORTHO05D004128 1.2e-28 131.0 91 73.6
Solyc08g075160.3 Solanum lycopersicum HOM05D003281 ORTHO05D004128 1.2e-28 131.0 91 70.3
PGSC0003DMG400020817 Solanum tuberosum HOM05D003281 ORTHO05D004128 1.2e-28 131.0 91 70.3
Duzib248G1352 Durio zibethinus HOM05D003281 ORTHO05D004128 1.5e-28 130.6 87 72.4
FvH4_1g24580 Fragaria vesca HOM05D003281 ORTHO05D004128 1.5e-28 130.6 91 71.4
Manes.08G044300 Manihot esculenta HOM05D003281 ORTHO05D004128 1.5e-28 130.6 91 70.3
Prupe.5G007600 Prunus persica HOM05D003281 ORTHO05D004128 1.5e-28 130.6 85 76.5
TPR.G1398 Trifolium pratense HOM05D003281 ORTHO05D004128 1.5e-28 130.6 129 56.6
FvH4_7g04800 Fragaria vesca HOM05D003281 ORTHO05D004128 2.0e-28 130.2 91 71.4
FAN06G1854 Fragaria x ananassa HOM05D003281 ORTHO05D004128 2.0e-28 130.2 91 71.4
FAN06G3868 Fragaria x ananassa HOM05D003281 ORTHO05D004128 2.0e-28 130.2 91 71.4
GSVIVG01012120001 Vitis vinifera HOM05D003281 ORTHO05D004128 2.0e-28 130.2 87 73.6
FAN15G0156 Fragaria x ananassa HOM05D003281 ORTHO05D004128 2.6e-28 129.8 85 75.3
CAN.G514.6 Capsicum annuum HOM05D003281 ORTHO05D004128 3.4e-28 129.4 90 70.0
Migut.B00724 Erythranthe guttata HOM05D003281 ORTHO05D004128 3.4e-28 129.4 91 70.3
FAN23G2047 Fragaria x ananassa HOM05D003281 ORTHO05D004128 3.4e-28 129.4 85 76.5
Medtr5g095820 Medicago truncatula HOM05D003281 ORTHO05D004128 3.4e-28 129.4 129 55.8
Psat5g186600 Pisum sativum HOM05D003281 ORTHO05D004128 3.4e-28 129.4 91 72.5
QL11p013631 Quercus lobata HOM05D003281 ORTHO05D004128 3.4e-28 129.4 88 72.7
RcHm_v2.0_Chr2g0124681 Rosa chinensis HOM05D003281 ORTHO05D004128 3.4e-28 129.4 85 75.3
Actinidia11434 Actinidia chinensis HOM05D003281 ORTHO05D004128 4.4e-28 129.0 91 70.3
FAN19G0112 Fragaria x ananassa HOM05D003281 ORTHO05D004128 4.4e-28 129.0 91 70.3
CiPaw.10G062800 Carya illinoinensis HOM05D003281 ORTHO05D004128 5.8e-28 128.6 88 72.7
Sed0004438 Sechium edule HOM05D003281 ORTHO05D004128 9.8e-28 127.9 91 70.3
CANSAT56G2301 Cannabis sativa HOM05D003281 ORTHO05D004128 1.3e-27 127.5 92 68.5
CANSAT56G3182 Cannabis sativa HOM05D003281 ORTHO05D004128 1.3e-27 127.5 92 68.5
Haze_06128 Corylus avellana HOM05D003281 ORTHO05D004128 1.3e-27 127.5 88 70.5
Hma1.2p1_0181F.1_g079910 Hydrangea macrophylla HOM05D003281 ORTHO05D004128 1.3e-27 127.5 87 72.4
Lsat_1_v5_gn_4_97540 Lactuca sativa HOM05D003281 ORTHO05D004128 1.3e-27 127.5 91 67.0
MD12G1033700 Malus domestica HOM05D003281 ORTHO05D004128 1.3e-27 127.5 91 70.3
Eucgr.A00733 Eucalyptus grandis HOM05D003281 ORTHO05D004128 1.7e-27 127.1 91 68.1
PGR004G1969 Punica granatum HOM05D003281 ORTHO05D004128 1.7e-27 127.1 91 70.3
BcaC04g19802 Brassica carinata HOM05D003281 ORTHO05D004128 2.2e-27 126.7 90 74.4
arahy.Tifrunner.gnm1.ann1.D0LQY1 Arachis hypogaea HOM05D003281 ORTHO05D004128 2.9e-27 126.3 86 70.9
arahy.Tifrunner.gnm1.ann1.F6IBWZ Arachis hypogaea HOM05D003281 ORTHO05D004128 2.9e-27 126.3 86 70.9
Aqoxy5G04041 Aquilegia oxysepala HOM05D003281 ORTHO05D004128 3.7e-27 125.9 85 72.9
unitig_46.g18375 Utricularia gibba HOM05D003281 ORTHO05D004128 3.7e-27 125.9 87 73.6
Eucgr.A00708 Eucalyptus grandis HOM05D003281 ORTHO05D004128 4.9e-27 125.6 91 67.0
Medtr3g013710 Medicago truncatula HOM05D003281 ORTHO05D004128 4.9e-27 125.6 91 70.3
Os08g0206600 Oryza sativa ssp. japonica HOM05D003281 ORTHO05D004128 4.9e-27 125.6 82 75.6
PSO675G6428 Papaver somniferum HOM05D003281 ORTHO05D004128 4.9e-27 125.6 91 68.1
unitig_48.g30290 Utricularia gibba HOM05D003281 ORTHO05D004128 6.4e-27 125.2 87 72.4
MBI14_g44727_MAGBIO Magnolia biondii HOM05D003281 ORTHO05D004128 8.3e-27 124.8 89 70.8
PSO017G0093 Papaver somniferum HOM05D003281 ORTHO05D004128 8.3e-27 124.8 91 67.0
DCAR_001294 Daucus carota HOM05D003281 ORTHO05D004128 1.4e-26 124.0 89 70.8
Sc26g0004530 Simmondsia chinensis HOM05D003281 ORTHO05D004128 1.4e-26 124.0 92 66.3
Zm00001eb070920 Zea mays HOM05D003281 ORTHO05D004128 3.2e-26 122.9 82 75.6
ATR0150G008 Amborella trichopoda HOM05D003281 ORTHO05D004128 7.0e-26 121.7 91 67.0
Zm00001eb413740 Zea mays HOM05D003281 ORTHO05D004128 7.0e-26 121.7 82 72.0
Sabra10G0084400 Salix brachista HOM05D003281 ORTHO05D004128 7.8e-25 118.2 127 54.3
Rhsim04G0089900 Rhododendron simsii HOM05D003281 ORTHO05D004128 1.0e-24 117.9 91 67.0
Cc02_g28610 Coffea canephora HOM05D003281 ORTHO05D004128 1.7e-24 117.1 129 51.2
Rhsim01G0054700 Rhododendron simsii HOM05D003281 ORTHO05D004128 3.0e-24 116.3 88 70.5
vmacro14667 Vaccinium macrocarpon HOM05D003281 ORTHO05D004128 3.0e-24 116.3 91 67.0
SEGI_14905 Sequoiadendron giganteum HOM05D003281 ORTHO05D004128 3.9e-24 115.9 112 58.0
SMO228G0099 Selaginella moellendorffii HOM05D003281 ORTHO05D004128 5.0e-24 115.5 136 48.5
Cc02_g09680 Coffea canephora HOM05D003281 ORTHO05D004128 6.6e-24 115.2 129 49.6
Lj2A344T44 Lonicera japonica HOM05D003281 ORTHO05D004128 6.6e-24 115.2 92 62.0
CDE06G0368 Ceratophyllum demersum HOM05D003281 ORTHO05D004128 1.9e-23 113.6 88 63.6
Mapoly0032s0021 Marchantia polymorpha HOM05D003281 ORTHO05D004128 3.3e-23 112.8 107 53.3
TPR.G6549 Trifolium pratense HOM05D003281 ORTHO05D004128 7.3e-23 111.7 78 73.1
HPP92_009463 Vanilla planifolia HOM05D003281 ORTHO05D004128 1.2e-22 110.9 86 64.0
Cc01_g05380 Coffea canephora HOM05D003281 ORTHO05D004128 1.6e-22 110.5 91 60.4
CBR_g50928 Chara braunii HOM05D003281 ORTHO05D004128 4.0e-21 105.9 89 62.9
Cfa000681 Carpinus fangiana HOM05D003281 ORTHO05D004128 6.8e-21 105.1 82 63.4
FAN01G0101 Fragaria x ananassa HOM05D003281 ORTHO05D004128 8.9e-21 104.8 95 62.1
RcHm_v2.0_Chr1g0326741 Rosa chinensis HOM05D003281 ORTHO05D004128 2.6e-20 103.2 72 70.8
Pp3c4_1350 Physcomitrium patens HOM05D003281 ORTHO05D004128 1.9e-18 97.1 93 51.6
Pp3c12_24590 Physcomitrium patens HOM05D003281 ORTHO05D004128 4.1e-18 95.9 93 52.7
AagrBONN_evm.TU.Sc2ySwM_368.3406 Anthoceros agrestis HOM05D003281 ORTHO05D004128 1.6e-17 94.0 91 53.8
PRCOL_00001991 Prasinoderma coloniale HOM05D003281 ORTHO05D004128 3.5e-17 92.8 89 52.8
CSS0018694 Camellia sinensis var. sinensis HOM05D003281 ORTHO05D004128 4.6e-17 92.4 74 62.2
SGA_v2.0_scaffold6G03254 Striga asiatica HOM05D003281 ORTHO05D004128 1.7e-16 90.5 62 67.7
MD14G1035300 Malus domestica HOM05D003281 ORTHO05D004128 3.0e-16 89.7 80 57.5
EL10Ac1g01790 Beta vulgaris HOM05D003281 ORTHO05D004128 1.5e-15 87.4 86 54.7
Rhsim04G0092800 Rhododendron simsii HOM05D003281 ORTHO05D004128 3.6e-14 82.8 103 49.5
MCO04G009 Micromonas commoda HOM05D003281 ORTHO05D004128 1.1e-13 81.3 87 48.3
EL10Ac1g02079 Beta vulgaris HOM05D003281 ORTHO05D004128 1.4e-13 80.9 60 66.7
SHI29159 Sapria himalayana HOM05D003281 ORTHO05D000001 4.0e-13 79.3 58 62.1
FAN20G2649 Fragaria x ananassa HOM05D003281 ORTHO05D004128 2.0e-12 77.0 83 53.0
Rhsim04G0089200 Rhododendron simsii HOM05D003281 ORTHO05D004128 1.3e-11 74.3 130 41.5
CDE02G3604 Ceratophyllum demersum HOM05D003281 ORTHO05D004128 4.9e-11 72.4 78 48.7
Sp2g07060 Schrenkiella parvula HOM05D003281 ORTHO05D004128 1.2e-09 67.8 33 97.0
Eucgr.A00699 Eucalyptus grandis HOM05D003281 ORTHO05D004128 1.6e-09 67.4 59 57.6
SalBow3G0238 Salvia bowleyana HOM05D003281 ORTHO05D004128 4.6e-09 65.9 38 84.2
unitig_46.g18364 Utricularia gibba HOM05D003281 ORTHO05D004128 6.0e-09 65.5 75 50.7
BcaC02g07738 Brassica carinata HOM05D003281 ORTHO05D032323 1.3e-08 64.3 33 93.9
BolC4t27890H Brassica oleracea HOM05D003281 ORTHO05D032323 1.3e-08 64.3 33 93.9
Pp3s32_111 Physcomitrium patens HOM05D003281 ORTHO05D004128 2.3e-08 63.5 80 43.8
BraA04t16730Z Brassica rapa HOM05D003281 ORTHO05D004128 3.3e-07 59.7 33 81.8
BraA08t33338Z Brassica rapa HOM05D003281 ORTHO05D004128 3.3e-07 59.7 33 81.8
Haze_26981 Corylus avellana HOM05D003281 ORTHO05D004128 8.1e-06 55.1 70 50.0


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