Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g19646 Brassica carinata HOM05D000073 ORTHO05D096137 6.9e-26 119.8 57 100.0
BcaC09g49147 Brassica carinata HOM05D000073 ORTHO05D094277 2.9e-24 114.4 57 96.5
C09p45120 Brassica napus HOM05D000210 ORTHO05D017582 6.5e-16 86.7 42 92.9
C09p10850 Brassica napus HOM05D000073 ORTHO05D017582 1.9e-15 85.1 42 90.5
C09p52400 Brassica napus HOM05D000073 ORTHO05D017582 5.5e-15 83.6 42 90.5
BolC9t58109H Brassica oleracea HOM05D000073 ORTHO05D017582 5.5e-15 83.6 42 90.5
BolC1t04175H Brassica oleracea HOM05D000073 ORTHO05D017582 2.7e-14 81.3 41 90.2
BcaC09g47723 Brassica carinata HOM05D000073 ORTHO05D013675 9.7e-12 72.8 40 85.0
BolC1t05820H Brassica oleracea HOM05D000073 ORTHO05D013675 9.7e-12 72.8 40 85.0
Thhalv10020496m.g Eutrema salsugineum HOM05D000073 ORTHO05D013675 1.7e-11 72.0 40 82.5
Sp3g02620 Schrenkiella parvula HOM05D000073 ORTHO05D013675 2.2e-11 71.6 40 82.5
A01p41470 Brassica napus HOM05D000073 ORTHO05D013675 3.7e-11 70.9 40 80.0
BNapus_Darmor_BZH_scaffold_78p00240 Brassica napus HOM05D000073 ORTHO05D013675 3.7e-11 70.9 40 80.0
BraA01t04570Z Brassica rapa HOM05D000073 ORTHO05D013675 3.7e-11 70.9 40 80.0
AT3G03640 Arabidopsis thaliana HOM05D000073 ORTHO05D013675 8.2e-11 69.7 40 82.5
Carub.0003s0280 Capsella rubella HOM05D000073 ORTHO05D013675 8.2e-11 69.7 40 82.5
CARHR077690 Cardamine hirsuta HOM05D000073 ORTHO05D013675 2.4e-10 68.2 40 77.5
AL3G13420 Arabidopsis lyrata HOM05D000073 ORTHO05D013675 4.1e-10 67.4 40 80.0
Aa31LG5G14150 Aethionema arabicum HOM05D000073 ORTHO05D013675 2.9e-08 61.2 40 67.5
THA.LOC104820802 Tarenaya hassleriana HOM05D000073 ORTHO05D013675 2.1e-06 55.1 41 63.4


User provided reference genes

Program Settings