Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g19503 Brassica carinata HOM05D001086 ORTHO05D009904 3.4e-79 298.1 136 100.0
Aa31sc106G50 Aethionema arabicum HOM05D000107 ORTHO05D000062 3.0e-43 178.7 136 59.6
Aa31sc465G10 Aethionema arabicum HOM05D001086 ORTHO05D009904 2.5e-42 175.6 131 61.1
Aa31sc688G10 Aethionema arabicum HOM05D001086 ORTHO05D009904 3.3e-42 175.3 131 60.3
Aa31sc555G60 Aethionema arabicum HOM05D001086 ORTHO05D009904 1.6e-41 172.9 131 60.3
Aa31LG7G12350 Aethionema arabicum HOM05D001086 ORTHO05D009904 4.8e-41 171.4 131 59.5
Aa31LG1G5710 Aethionema arabicum HOM05D001086 ORTHO05D009904 6.2e-41 171.0 131 59.5
Aa31sc360G20 Aethionema arabicum HOM05D001086 ORTHO05D001112 9.0e-40 167.2 136 56.6
Carub.0006s2725 Capsella rubella HOM05D001086 ORTHO05D009904 3.5e-36 155.2 137 49.6
BcaC09g49251 Brassica carinata HOM05D001086 ORTHO05D009904 7.9e-36 154.1 134 47.8
Aa31sc1568G20 Aethionema arabicum HOM05D001086 ORTHO05D009904 6.7e-35 151.0 131 55.0
Aa31sc237G10 Aethionema arabicum HOM05D001086 ORTHO05D009904 4.8e-33 144.8 133 51.9
Aa31sc598G30 Aethionema arabicum HOM05D001086 ORTHO05D009904 8.2e-33 144.1 144 50.0
Aa31LG2G17950 Aethionema arabicum HOM05D001086 ORTHO05D001112 3.4e-31 138.7 109 58.7
BolC5t33452H Brassica oleracea HOM05D001086 ORTHO05D009904 3.8e-30 135.2 116 51.7
Aa31sc99G100 Aethionema arabicum HOM05D001086 ORTHO05D009904 1.4e-29 133.3 91 63.7
BcaC02g08322 Brassica carinata HOM05D001086 ORTHO05D009904 2.5e-29 132.5 91 60.4
Aa31sc116G30 Aethionema arabicum HOM05D001086 ORTHO05D001112 3.2e-29 132.1 91 64.8
Aa31sc21G160 Aethionema arabicum HOM05D001086 ORTHO05D009904 5.5e-29 131.3 91 61.5
Aa31csc81G60 Aethionema arabicum HOM05D001086 ORTHO05D009904 2.7e-28 129.0 91 62.6
Aa31sc639G60 Aethionema arabicum HOM05D001086 ORTHO05D009904 9.7e-26 120.6 91 60.4
BcaC02g08637 Brassica carinata HOM05D001086 ORTHO05D009904 2.2e-25 119.4 86 59.3
Aa31sc32G110 Aethionema arabicum HOM05D001086 ORTHO05D009904 1.4e-24 116.7 109 54.1
Aa31sc250G50 Aethionema arabicum HOM05D001086 ORTHO05D009904 2.5e-21 105.9 93 55.9
THA.LOC104825104 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 8.8e-19 97.4 125 34.4
BcaC01g03173 Brassica carinata HOM05D008266 ORTHO05D000062 1.1e-18 97.1 133 34.6
Aa31sc142G50 Aethionema arabicum HOM05D001086 ORTHO05D009904 1.5e-18 96.7 68 64.7
THA.LOC104810224 Tarenaya hassleriana HOM05D008266 ORTHO05D000062 7.4e-18 94.4 143 29.4
THA.LOC104815415 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 7.4e-18 94.4 143 29.4
Aa31sc75G50 Aethionema arabicum HOM05D000107 ORTHO05D000062 1.3e-17 93.6 128 35.9
THA.LOC104816687 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 3.7e-17 92.0 143 28.7
ECA234G0534 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.8e-17 91.7 130 33.1
Aa31LG7G11710 Aethionema arabicum HOM05D001086 ORTHO05D009904 6.3e-17 91.3 69 55.1
SHI37531 Sapria himalayana HOM05D000107 ORTHO05D000062 1.8e-16 89.7 138 29.0
SHI42354 Sapria himalayana HOM05D000107 ORTHO05D000062 3.1e-16 89.0 138 29.0
SHI36114 Sapria himalayana HOM05D000107 ORTHO05D000062 6.9e-16 87.8 138 29.0
TPR.G12582 Trifolium pratense HOM05D000107 ORTHO05D000062 9.1e-16 87.4 142 28.9
THA.LOC104810147 Tarenaya hassleriana HOM05D008266 ORTHO05D000062 1.2e-15 87.0 131 32.8
THA.LOC104798989 Tarenaya hassleriana HOM05D008266 ORTHO05D000062 2.0e-15 86.3 115 33.9
BcaB01g00797 Brassica carinata HOM05D008266 ORTHO05D000062 2.6e-15 85.9 129 31.0
BcaB07g30750 Brassica carinata HOM05D008266 ORTHO05D000062 3.4e-15 85.5 124 32.3
Aa31sc135G30 Aethionema arabicum HOM05D001086 ORTHO05D009904 7.7e-15 84.3 90 51.1
BcaC08g44727 Brassica carinata HOM05D008266 ORTHO05D000062 7.7e-15 84.3 124 33.1
THA.LOC104810640 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 1.0e-14 84.0 140 27.9
BcaC01g02221 Brassica carinata HOM05D008266 ORTHO05D009904 1.3e-14 83.6 122 32.8
TPR.G39680 Trifolium pratense HOM05D000107 ORTHO05D000062 1.3e-14 83.6 137 27.0
TPR.G38773 Trifolium pratense HOM05D000107 ORTHO05D000062 2.2e-14 82.8 131 29.0
BcaB07g32592 Brassica carinata HOM05D008266 ORTHO05D000062 2.9e-14 82.4 131 30.5
BcaC03g17092 Brassica carinata HOM05D008266 ORTHO05D000062 2.9e-14 82.4 129 31.0
BcaB02g11280 Brassica carinata HOM05D008266 ORTHO05D000062 3.8e-14 82.0 87 35.6
BcaC04g18851 Brassica carinata HOM05D008266 ORTHO05D000062 3.8e-14 82.0 129 31.8
BcaB02g11130 Brassica carinata HOM05D008266 ORTHO05D000062 8.5e-14 80.9 92 38.0
BolC3t17057H Brassica oleracea HOM05D001086 ORTHO05D009904 3.2e-13 79.0 133 31.6
BcaB03g16140 Brassica carinata HOM05D008266 ORTHO05D000062 5.5e-13 78.2 98 34.7
SHI49792 Sapria himalayana HOM05D000107 ORTHO05D000062 5.5e-13 78.2 138 28.3
BcaC01g03082 Brassica carinata HOM05D008266 ORTHO05D009904 7.2e-13 77.8 124 31.5
BcaC08g47042 Brassica carinata HOM05D008266 ORTHO05D000062 7.2e-13 77.8 105 33.3
SHI07609 Sapria himalayana HOM05D000107 ORTHO05D000062 7.2e-13 77.8 138 26.8
BcaC02g08794 Brassica carinata HOM05D008266 ORTHO05D000062 3.6e-12 75.5 118 27.1
AUR62040739 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.6e-12 75.5 128 34.4
ECA246G4894 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.0e-11 73.9 138 27.5
TPR.G36007 Trifolium pratense HOM05D000107 ORTHO05D000062 1.0e-11 73.9 92 32.6
BcaNung02471 Brassica carinata HOM05D008266 ORTHO05D000062 3.0e-11 72.4 105 31.4
SHI31941 Sapria himalayana HOM05D000107 ORTHO05D000062 3.0e-11 72.4 125 28.0
Manes.13G071916 Manihot esculenta HOM05D000107 ORTHO05D009534 3.9e-11 72.0 141 25.5
BcaC06g36414 Brassica carinata HOM05D008266 ORTHO05D000062 5.1e-11 71.6 93 32.3
Sp1g31350 Schrenkiella parvula HOM05D008266 ORTHO05D000062 5.1e-11 71.6 129 26.4
BcaB06g26682 Brassica carinata HOM05D008266 ORTHO05D000062 1.1e-10 70.5 94 30.9
BcaC07g37918 Brassica carinata HOM05D008266 ORTHO05D009904 1.5e-10 70.1 129 29.5
BcaB02g10137 Brassica carinata HOM05D008266 ORTHO05D000062 3.3e-10 68.9 72 37.5
BcaC03g17259 Brassica carinata HOM05D008266 ORTHO05D000062 3.3e-10 68.9 125 29.6
BcaC05g26938 Brassica carinata HOM05D008266 ORTHO05D009904 4.4e-10 68.6 69 39.1
Manes.10G068101 Manihot esculenta HOM05D000107 ORTHO05D000062 4.4e-10 68.6 137 24.1
TPR.G11453 Trifolium pratense HOM05D000107 ORTHO05D000062 4.4e-10 68.6 131 26.0
Manes.15G191830 Manihot esculenta HOM05D000107 ORTHO05D000062 9.7e-10 67.4 131 25.2
EL10Ac2g03127 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-09 67.0 118 32.2
BcaB01g02847 Brassica carinata HOM05D008266 ORTHO05D000062 1.3e-09 67.0 69 39.1
AUR62043240 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.3e-09 67.0 128 28.1
EL10Ac3g06762 Beta vulgaris HOM05D000107 ORTHO05D000062 1.7e-09 66.6 118 32.2
EL10Ac3g06764 Beta vulgaris HOM05D000107 ORTHO05D000062 1.7e-09 66.6 118 32.2
EL10Ac5g11503 Beta vulgaris HOM05D000107 ORTHO05D000062 1.7e-09 66.6 118 32.2
EL10Ac6g14419 Beta vulgaris HOM05D000107 ORTHO05D000062 1.7e-09 66.6 118 32.2
EL10Ac8g19370 Beta vulgaris HOM05D000107 ORTHO05D000062 1.7e-09 66.6 118 32.2
BolC1t02354H Brassica oleracea HOM05D001086 ORTHO05D001112 1.7e-09 66.6 50 54.0
EL10Ac1g02214 Beta vulgaris HOM05D000107 ORTHO05D000062 2.2e-09 66.2 139 27.3
EL10Ac5g10888 Beta vulgaris HOM05D000107 ORTHO05D000062 2.2e-09 66.2 118 32.2
EL10Ac5g11722 Beta vulgaris HOM05D000107 ORTHO05D000062 2.2e-09 66.2 124 26.6
EL10Ac9g20869 Beta vulgaris HOM05D000107 ORTHO05D000062 2.2e-09 66.2 118 31.4
Os12g0544600 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 2.2e-09 66.2 155 28.4
TWI81G0027 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 2.2e-09 66.2 137 24.8
EL10Ac3g06535 Beta vulgaris HOM05D000107 ORTHO05D000062 2.8e-09 65.9 118 31.4
EL10Ac5g12078 Beta vulgaris HOM05D000107 ORTHO05D000062 2.8e-09 65.9 118 32.2
BcaC09g48783 Brassica carinata HOM05D008266 ORTHO05D000062 2.8e-09 65.9 81 30.9
Os01g0768600 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 2.8e-09 65.9 141 29.1
EL10Ac5g11788 Beta vulgaris HOM05D000107 ORTHO05D000062 3.7e-09 65.5 118 32.2
EL10Ac5g11816 Beta vulgaris HOM05D000107 ORTHO05D000062 3.7e-09 65.5 118 31.4
EL10Ac7g17546 Beta vulgaris HOM05D000107 ORTHO05D000062 3.7e-09 65.5 118 31.4
EL10Ac5g11174 Beta vulgaris HOM05D000107 ORTHO05D000062 4.8e-09 65.1 118 32.2
AUR62042306 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.8e-09 65.1 93 36.6
EL10Ac2g03017 Beta vulgaris HOM05D000107 ORTHO05D000062 6.3e-09 64.7 129 30.2
BcaB04g17841 Brassica carinata HOM05D008266 ORTHO05D000062 6.3e-09 64.7 94 30.9
Manes.16G074801 Manihot esculenta HOM05D000107 ORTHO05D000062 6.3e-09 64.7 131 24.4
BcaC01g01797 Brassica carinata HOM05D008266 ORTHO05D000062 8.2e-09 64.3 116 29.3
Manes.06G021367 Manihot esculenta HOM05D000107 ORTHO05D000062 8.2e-09 64.3 138 26.8
BcaC08g44331 Brassica carinata HOM05D008266 ORTHO05D000062 1.1e-08 63.9 72 37.5
Os02g0543900 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 1.1e-08 63.9 134 26.9
TWI18G0474 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.1e-08 63.9 142 25.4
SHI51771 Sapria himalayana HOM05D000107 ORTHO05D000062 1.4e-08 63.5 131 26.0
EL10Ac2g03191 Beta vulgaris HOM05D000107 ORTHO05D000062 1.8e-08 63.2 136 27.9
BcaC06g34574 Brassica carinata HOM05D008266 ORTHO05D000062 1.8e-08 63.2 69 36.2
Manes.17G119950 Manihot esculenta HOM05D000107 ORTHO05D000062 1.8e-08 63.2 127 27.6
HanXRQChr05g0154061 Helianthus annuus HOM05D000107 ORTHO05D000568 2.4e-08 62.8 119 34.5
HanXRQChr05g0154091 Helianthus annuus HOM05D000107 ORTHO05D000568 2.4e-08 62.8 119 34.5
Ah.05g173540 Amaranthus hybridus HOM05D000107 ORTHO05D000062 3.1e-08 62.4 123 30.1
EL10Ac1g01791 Beta vulgaris HOM05D000107 ORTHO05D000062 3.1e-08 62.4 118 31.4
EL10Ac5g11466 Beta vulgaris HOM05D000107 ORTHO05D000062 3.1e-08 62.4 118 30.5
BcaC04g20587 Brassica carinata HOM05D008266 ORTHO05D000062 3.1e-08 62.4 129 28.7
AUR62022286 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.1e-08 62.0 122 35.2
Ah.02g121890 Amaranthus hybridus HOM05D000107 ORTHO05D000062 5.3e-08 61.6 101 33.7
BcaC06g35408 Brassica carinata HOM05D008266 ORTHO05D000062 5.3e-08 61.6 75 38.7
Thecc.10G113400 Theobroma cacao HOM05D000066 ORTHO05D016279 5.3e-08 61.6 128 29.7
BcaC03g18089 Brassica carinata HOM05D008266 ORTHO05D000062 7.0e-08 61.2 69 33.3
SHI17352 Sapria himalayana HOM05D000107 ORTHO05D000062 7.0e-08 61.2 88 30.7
TWI53G0600 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 9.1e-08 60.8 137 22.6
TWI73G0119 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 9.1e-08 60.8 127 24.4
TWI81G0480 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 9.1e-08 60.8 143 24.5
EL10Ac8g19870 Beta vulgaris HOM05D000107 ORTHO05D000062 1.2e-07 60.5 118 31.4
Manes.04G058760 Manihot esculenta HOM05D000107 ORTHO05D000062 2.0e-07 59.7 117 23.9
TWI60G0864 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 2.0e-07 59.7 137 24.1
SpUn0001_0660 Schrenkiella parvula HOM05D007948 ORTHO05D006374 2.6e-07 59.3 120 25.8
ECA247G3969 Erigeron canadensis HOM05D000107 ORTHO05D000062 3.4e-07 58.9 88 29.5
TWI32G1089 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 3.4e-07 58.9 142 23.9
TWI38G0895 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 3.4e-07 58.9 142 23.9
EL10Ac5g11889 Beta vulgaris HOM05D000107 ORTHO05D000062 5.9e-07 58.2 98 34.7
SHI35609 Sapria himalayana HOM05D000107 ORTHO05D000062 5.9e-07 58.2 82 28.0
Aqoxy1G03594 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 7.7e-07 57.8 130 26.9
Aqoxy1G04143 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 7.7e-07 57.8 130 26.9
Aqoxy4G01545 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 7.7e-07 57.8 130 26.9
CAN.G628.16 Capsicum annuum HOM05D000292 ORTHO05D000172 7.7e-07 57.8 126 27.0
AUR62035729 Chenopodium quinoa HOM05D000107 ORTHO05D000062 7.7e-07 57.8 142 26.1
EL10Ac1g02241 Beta vulgaris HOM05D000107 ORTHO05D000062 1.0e-06 57.4 90 35.6
ECA236G4269 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.0e-06 57.4 124 29.8
TWI56G1165 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.0e-06 57.4 137 22.6
SHI45688 Sapria himalayana HOM05D000107 ORTHO05D000062 1.3e-06 57.0 85 31.8
Aa31LG6G11350 Aethionema arabicum HOM05D001086 ORTHO05D009904 1.7e-06 56.6 45 60.0
Ca_13708_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000110 1.7e-06 56.6 84 32.1
EL10Ac4g08668 Beta vulgaris HOM05D000107 ORTHO05D000062 2.2e-06 56.2 90 34.4
BolC4t22902H Brassica oleracea HOM05D015909 ORTHO05D016726 2.9e-06 55.8 34 67.6
EL10Ac2g03817 Beta vulgaris HOM05D000107 ORTHO05D000062 3.8e-06 55.5 119 32.8
EL10Ac6g14194 Beta vulgaris HOM05D000107 ORTHO05D000062 3.8e-06 55.5 108 31.5
Ca_12327_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 3.8e-06 55.5 132 27.3
ECA248G3962 Erigeron canadensis HOM05D000006 ORTHO05D000062 3.8e-06 55.5 122 28.7
Lj1g0022399 Lotus japonicus HOM05D000107 ORTHO05D000062 3.8e-06 55.5 150 26.0
Ah.14g081230 Amaranthus hybridus HOM05D000107 ORTHO05D000062 5.0e-06 55.1 90 30.0
Ah.14g081250 Amaranthus hybridus HOM05D000107 ORTHO05D000062 5.0e-06 55.1 90 30.0
SHI43950 Sapria himalayana HOM05D000107 ORTHO05D000062 5.0e-06 55.1 72 33.3
Ah.08g221350 Amaranthus hybridus HOM05D000107 ORTHO05D000062 6.5e-06 54.7 77 32.5
SHI22906 Sapria himalayana HOM05D000107 ORTHO05D000062 6.5e-06 54.7 93 24.7
SHI41918 Sapria himalayana HOM05D000107 ORTHO05D000062 8.5e-06 54.3 126 23.8


User provided reference genes

Program Settings