Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g19439 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-86 322.4 155 100.0
BcaC04g19440 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-66 256.1 210 66.2
BcaC08g44837 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-44 183.0 181 56.9
BcaC01g02211 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-24 115.5 188 43.1
BcaC01g01165 Brassica carinata HOM05D000496 ORTHO05D000411 4.6e-24 115.2 187 39.6
BcaC08g45123 Brassica carinata HOM05D000496 ORTHO05D000411 5.1e-23 111.7 96 63.5
BcaC09g50802 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-22 110.5 198 40.9
BolC1t03568H Brassica oleracea HOM05D000496 ORTHO05D000411 3.3e-22 109.0 91 67.0
BolSC21t60240H Brassica oleracea HOM05D000496 ORTHO05D000411 2.8e-21 105.9 79 74.7
BcaC06g36700 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-20 103.2 80 71.2
BcaC05g29488 Brassica carinata HOM05D000496 ORTHO05D000411 9.0e-20 100.9 56 85.7
BcaC03g14607 Brassica carinata HOM05D000496 ORTHO05D031790 1.3e-18 97.1 144 45.8
BcaC09g47909 Brassica carinata HOM05D000496 ORTHO05D000411 8.4e-18 94.4 63 73.0
BolC9t55777H Brassica oleracea HOM05D000496 ORTHO05D000411 9.3e-17 90.9 55 80.0
BcaC08g44039 Brassica carinata HOM05D000496 ORTHO05D014937 1.2e-16 90.5 62 71.0
BcaC03g15800 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-16 90.1 56 80.4
BcaC03g14957 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-15 87.4 88 56.8
BcaC04g21193 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-15 87.4 54 77.8
BraA08t32350Z Brassica rapa HOM05D000496 ORTHO05D027404 1.8e-15 86.7 66 66.7
BolC3t17901H Brassica oleracea HOM05D000496 ORTHO05D000411 2.3e-15 86.3 135 43.7
BcaC03g16657 Brassica carinata HOM05D000496 ORTHO05D000411 3.0e-15 85.9 56 76.8
BcaNung04302 Brassica carinata HOM05D000496 ORTHO05D000411 5.1e-15 85.1 173 37.0
BcaB08g35848 Brassica carinata HOM05D000496 ORTHO05D000411 8.7e-15 84.3 65 60.0
BcaB03g14222 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-14 83.2 67 62.7
BcaB04g17691 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-14 83.2 74 51.4
BcaB08g35328 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-14 82.8 59 67.8
BcaC07g39538 Brassica carinata HOM05D000496 ORTHO05D000411 4.3e-14 82.0 80 52.5
BraA01t03743Z Brassica rapa HOM05D000496 ORTHO05D019920 4.3e-14 82.0 42 90.5
BolC1t05084H Brassica oleracea HOM05D000496 ORTHO05D000411 5.7e-14 81.6 65 58.5
BcaC08g43480 Brassica carinata HOM05D000496 ORTHO05D000411 7.4e-14 81.3 56 71.4
BcaB06g26647 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-13 80.5 67 56.7
BcaC03g15417 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-13 80.5 74 64.9
BcaC01g01817 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-13 80.1 67 58.2
BolC3t19455H Brassica oleracea HOM05D000496 ORTHO05D032668 1.6e-13 80.1 67 58.2
BcaC02g08910 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-13 79.0 80 52.5
BcaC09g49480 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-13 79.0 38 97.4
BcaC09g49508 Brassica carinata HOM05D033252 ORTHO05D000411 3.7e-13 79.0 59 69.5
BcaC05g27815 Brassica carinata HOM05D000496 ORTHO05D000411 4.8e-13 78.6 65 55.4
BolC5t32675H Brassica oleracea HOM05D000496 ORTHO05D000411 6.3e-13 78.2 65 56.9
BcaC09g48334 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-12 77.4 95 45.3
BcaB06g26381 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-12 77.0 67 56.7
BcaB04g17470 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-12 76.6 67 58.2
BcaB06g28121 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-12 76.6 67 58.2
BcaC01g02163 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-12 76.3 45 77.8
BcaC08g47088 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-12 76.3 40 87.5
BcaB01g02818 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-12 75.9 78 48.7
BcaC09g49110 Brassica carinata HOM05D000496 ORTHO05D000411 4.1e-12 75.5 54 64.8
BraA04t16615Z Brassica rapa HOM05D000496 ORTHO05D000411 6.9e-12 74.7 65 53.8
BcaC02g10837 Brassica carinata HOM05D000496 ORTHO05D000411 9.0e-12 74.3 53 66.0
BcaC06g36711 Brassica carinata HOM05D000496 ORTHO05D000411 9.0e-12 74.3 57 63.2
BcaC04g22246 Brassica carinata HOM05D033252 ORTHO05D000411 1.2e-11 73.9 88 55.7
BcaB01g02232 Brassica carinata HOM05D000496 ORTHO05D000411 4.5e-11 72.0 65 50.8
BcaC07g38016 Brassica carinata HOM05D000496 ORTHO05D000411 4.5e-11 72.0 81 44.4
BcaB07g32484 Brassica carinata HOM05D000496 ORTHO05D000411 5.9e-11 71.6 74 48.6
BcaC05g27902 Brassica carinata HOM05D000496 ORTHO05D000411 5.9e-11 71.6 74 47.3
Thhalv10009841m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 5.9e-11 71.6 65 52.3
A05p19890 Brassica napus HOM05D000496 ORTHO05D000411 7.7e-11 71.2 80 46.2
BcaC05g30568 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-10 70.9 97 42.3
BcaB01g03110 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-10 69.3 82 45.1
BolC8t47690H Brassica oleracea HOM05D000496 ORTHO05D000411 2.9e-10 69.3 72 50.0
BcaC01g02265 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-10 68.9 42 73.8
C06p42420 Brassica napus HOM05D000496 ORTHO05D000411 3.8e-10 68.9 65 52.3
BraA01t02446Z Brassica rapa HOM05D000496 ORTHO05D000411 3.8e-10 68.9 65 50.8
Sp7g03480 Schrenkiella parvula HOM05D000496 ORTHO05D000411 3.8e-10 68.9 72 45.8
BcaB04g17268 Brassica carinata HOM05D000496 ORTHO05D000411 5.0e-10 68.6 65 49.2
BcaC02g07871 Brassica carinata HOM05D000496 ORTHO05D000411 5.0e-10 68.6 65 49.2
BcaC02g08332 Brassica carinata HOM05D033252 ORTHO05D000411 5.0e-10 68.6 88 53.4
Thhalv10019737m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 5.0e-10 68.6 65 52.3
BcaC01g00534 Brassica carinata HOM05D000020 ORTHO05D000543 6.5e-10 68.2 70 48.6
AL6G45480 Arabidopsis lyrata HOM05D000496 ORTHO05D000411 8.5e-10 67.8 67 53.7
C06p14200 Brassica napus HOM05D000496 ORTHO05D000411 8.5e-10 67.8 90 44.4
BcaC05g26989 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-09 67.4 89 41.6
BcaB07g31293 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-09 67.0 34 88.2
BcaC04g21355 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-09 67.0 60 53.3
BcaC09g49300 Brassica carinata HOM05D000496 ORTHO05D023877 1.4e-09 67.0 58 58.6
C01p40400 Brassica napus HOM05D000496 ORTHO05D023877 1.4e-09 67.0 58 58.6
Thhalv10000620m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.4e-09 67.0 65 49.2
BcaC07g37237 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-09 66.6 65 49.2
BcaC06g35766 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-09 66.2 65 46.2
Sp3g23630 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.2e-09 65.5 68 50.0
BcaC07g38782 Brassica carinata HOM05D000496 ORTHO05D000411 5.5e-09 65.1 60 60.0
CARHR180340 Cardamine hirsuta HOM05D000496 ORTHO05D000411 5.5e-09 65.1 68 48.5
BcaC02g10520 Brassica carinata HOM05D000496 ORTHO05D000411 9.4e-09 64.3 34 85.3
Thhalv10005542m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 9.4e-09 64.3 65 49.2
Sp3g24940 Schrenkiella parvula HOM05D000496 ORTHO05D000411 3.6e-08 62.4 66 43.9
Sp5g17960 Schrenkiella parvula HOM05D000496 ORTHO05D000411 3.6e-08 62.4 88 39.8
BcaB01g02810 Brassica carinata HOM05D000496 ORTHO05D000411 4.6e-08 62.0 43 62.8
Carub.0007s3157 Capsella rubella HOM05D000496 ORTHO05D000411 6.1e-08 61.6 65 41.5
Thhalv10015514m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 6.1e-08 61.6 72 45.8
BcaC09g48817 Brassica carinata HOM05D000496 ORTHO05D016100 7.9e-08 61.2 66 48.5
BcaB02g10494 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-07 60.8 51 58.8
Carub.0004s0523 Capsella rubella HOM05D000496 ORTHO05D000411 1.0e-07 60.8 103 35.9
Carub.0008s1087 Capsella rubella HOM05D000496 ORTHO05D000411 1.0e-07 60.8 65 46.2
Thhalv10002827m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.0e-07 60.8 72 44.4
Thhalv10028246m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.0e-07 60.8 65 47.7
BcaB03g15279 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-07 60.5 65 49.2
Thhalv10012321m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.4e-07 60.5 72 44.4
Thhalv10022993m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.4e-07 60.5 49 59.2
Thhalv10027058m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.4e-07 60.5 65 44.6
Carub.0003s2750 Capsella rubella HOM05D000496 ORTHO05D000411 1.8e-07 60.1 87 39.1
Carub.0008s0594 Capsella rubella HOM05D000496 ORTHO05D000411 1.8e-07 60.1 65 47.7
Thhalv10002274m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.8e-07 60.1 60 50.0
BcaB04g17753 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-07 59.7 87 44.8
BcaC01g02090 Brassica carinata HOM05D010266 ORTHO05D000411 2.3e-07 59.7 67 50.7
Sp6g04730 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.3e-07 59.7 114 34.2
BcaB03g16361 Brassica carinata HOM05D000496 ORTHO05D000411 3.9e-07 58.9 65 44.6
Sp1g33990 Schrenkiella parvula HOM05D000496 ORTHO05D000411 3.9e-07 58.9 65 43.1
Thhalv10005429m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 5.1e-07 58.5 45 57.8
Sp4g08700 Schrenkiella parvula HOM05D000496 ORTHO05D000411 5.1e-07 58.5 68 45.6
Sp7g07460 Schrenkiella parvula HOM05D000496 ORTHO05D000411 5.1e-07 58.5 65 46.2
BcaC03g14200 Brassica carinata HOM05D000496 ORTHO05D000411 8.8e-07 57.8 33 78.8
BcaC06g35999 Brassica carinata HOM05D000496 ORTHO05D000411 8.8e-07 57.8 56 50.0
Thhalv10012328m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 8.8e-07 57.8 45 57.8
Sp4g07540 Schrenkiella parvula HOM05D000496 ORTHO05D000411 8.8e-07 57.8 53 52.8
BcaC06g35904 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-06 57.4 66 45.5
Sp3g28380 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.1e-06 57.4 65 44.6
Sp4g05320 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.1e-06 57.4 108 34.3
BcaB04g17415 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-06 57.0 66 48.5
BcaC04g22294 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-06 57.0 71 45.1
BcaC06g36324 Brassica carinata HOM05D000496 ORTHO05D027247 1.5e-06 57.0 96 37.5
BcaC02g09783 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-06 56.2 45 60.0
Thhalv10015762m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.5e-06 56.2 89 41.6
BcaC01g01876 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-06 55.8 45 60.0
BcaC06g35793 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-06 55.8 41 56.1
Carub.0001s1088 Capsella rubella HOM05D000496 ORTHO05D000411 3.3e-06 55.8 67 41.8
Thhalv10002297m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 3.3e-06 55.8 45 55.6
Sp1g31040 Schrenkiella parvula HOM05D000496 ORTHO05D000411 3.3e-06 55.8 39 64.1
BcaC04g21212 Brassica carinata HOM05D000496 ORTHO05D000411 4.3e-06 55.5 43 58.1
Carub.0007s3143 Capsella rubella HOM05D000496 ORTHO05D000411 4.3e-06 55.5 67 43.3
Thhalv10003397m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 4.3e-06 55.5 43 55.8
Sp1g33610 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.3e-06 55.5 45 55.6
Sp7g10700 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.3e-06 55.5 66 40.9
SpUn0002_0030 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.3e-06 55.5 65 46.2
BcaC08g46291 Brassica carinata HOM05D000496 ORTHO05D027247 5.7e-06 55.1 110 37.3
Carub.0002s0991 Capsella rubella HOM05D000496 ORTHO05D000411 5.7e-06 55.1 148 32.4
Sp4g04600 Schrenkiella parvula HOM05D000496 ORTHO05D000411 5.7e-06 55.1 65 38.5
Sp7g09900 Schrenkiella parvula HOM05D000496 ORTHO05D000411 5.7e-06 55.1 60 46.7
Sp1g29320 Schrenkiella parvula HOM05D000496 ORTHO05D000411 7.4e-06 54.7 45 55.6
Sp6g11020 Schrenkiella parvula HOM05D000496 ORTHO05D000411 7.4e-06 54.7 43 51.2
BcaB06g27750 Brassica carinata HOM05D000496 ORTHO05D000411 9.7e-06 54.3 80 40.0
BolC7t41547H Brassica oleracea HOM05D000496 ORTHO05D000411 9.7e-06 54.3 79 41.8
Carub.0002s1000 Capsella rubella HOM05D000496 ORTHO05D000411 9.7e-06 54.3 148 31.8


User provided reference genes

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