Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g19377 Brassica carinata HOM05D004342 ORTHO05D011040 9.5e-155 550.1 261 100.0
C09p56360 Brassica napus HOM05D004342 ORTHO05D011040 1.4e-150 536.2 261 98.5
BolC9t58505H Brassica oleracea HOM05D004342 ORTHO05D011040 1.8e-145 519.2 262 95.8
BcaC03g15908 Brassica carinata HOM05D004342 ORTHO05D011040 2.1e-133 479.2 263 90.1
BolC4t24121H Brassica oleracea HOM05D004342 ORTHO05D011040 4.6e-133 478.0 271 87.1
C04p46690 Brassica napus HOM05D004342 ORTHO05D011040 1.3e-132 476.5 263 89.0
BolC4t26257H Brassica oleracea HOM05D004342 ORTHO05D011040 2.3e-132 475.7 271 85.6
C04p26830 Brassica napus HOM05D004342 ORTHO05D011040 8.6e-132 473.8 263 89.4
BraA02t07939Z Brassica rapa HOM05D004342 ORTHO05D107931 1.6e-130 469.5 273 85.3
BcaC05g27753 Brassica carinata HOM05D004342 ORTHO05D032754 1.6e-117 426.4 247 85.4
C03p70160 Brassica napus HOM05D004342 ORTHO05D011040 2.7e-117 425.6 235 88.9
BraA04t16111Z Brassica rapa HOM05D004342 ORTHO05D011040 4.8e-114 414.8 266 80.1
BcaB01g01402 Brassica carinata HOM05D004342 ORTHO05D011040 9.9e-112 407.1 268 77.2
BcaB03g16647 Brassica carinata HOM05D004342 ORTHO05D011040 1.7e-111 406.4 268 76.9
BcaB08g35473 Brassica carinata HOM05D004342 ORTHO05D011040 1.4e-110 403.3 268 76.5
C02p48390 Brassica napus HOM05D004342 ORTHO05D011040 4.2e-110 401.7 265 79.2
BolC2t10870H Brassica oleracea HOM05D004342 ORTHO05D011040 4.2e-110 401.7 265 79.2
BcaB05g23589 Brassica carinata HOM05D004342 ORTHO05D011040 6.0e-109 397.9 271 73.1
BolC6t36906H Brassica oleracea HOM05D004342 ORTHO05D011040 1.1e-107 393.7 271 73.4
BcaB07g32852 Brassica carinata HOM05D004342 ORTHO05D011040 2.1e-106 389.4 261 73.9
C05p37450 Brassica napus HOM05D004342 ORTHO05D032754 2.0e-104 382.9 259 76.1
BcaB05g23725 Brassica carinata HOM05D004342 ORTHO05D011040 2.2e-103 379.4 263 73.0
BcaC03g16189 Brassica carinata HOM05D004342 ORTHO05D011040 4.2e-102 375.2 265 74.7
BcaB06g27914 Brassica carinata HOM05D004342 ORTHO05D011040 3.5e-101 372.1 266 69.2
BolC3t19271H Brassica oleracea HOM05D004342 ORTHO05D032754 3.5e-101 372.1 259 73.7
BcaB08g35285 Brassica carinata HOM05D004342 ORTHO05D011040 1.0e-100 370.5 265 69.8
BcaB05g23453 Brassica carinata HOM05D004342 ORTHO05D011040 3.0e-100 369.0 265 69.4
BcaB01g02102 Brassica carinata HOM05D004342 ORTHO05D011040 6.7e-100 367.9 265 69.8
BolC2t09673H Brassica oleracea HOM05D004342 ORTHO05D042860 4.3e-99 365.2 271 70.5
BcaB08g35403 Brassica carinata HOM05D004342 ORTHO05D011040 3.7e-98 362.1 268 70.5
C07p02600 Brassica napus HOM05D004342 ORTHO05D040391 3.8e-95 352.1 262 67.6
BolC7t40658H Brassica oleracea HOM05D004342 ORTHO05D040391 8.4e-95 350.9 262 67.2
BcaB08g35544 Brassica carinata HOM05D004342 ORTHO05D011040 5.5e-94 348.2 265 66.0
BcaB03g16622 Brassica carinata HOM05D004342 ORTHO05D011040 3.5e-93 345.5 263 66.2
BraA01t02418Z Brassica rapa HOM05D004342 ORTHO05D011040 1.6e-90 336.7 264 66.3
BcaB02g10664 Brassica carinata HOM05D004342 ORTHO05D011040 2.1e-90 336.3 263 65.0
C06p17080 Brassica napus HOM05D004342 ORTHO05D016748 2.8e-90 335.9 208 76.9
BcaB06g27477 Brassica carinata HOM05D004342 ORTHO05D011040 1.4e-89 333.6 265 64.5
BolC7t40696H Brassica oleracea HOM05D004342 ORTHO05D042740 3.1e-89 332.4 264 64.8
BolC8t47840H Brassica oleracea HOM05D004342 ORTHO05D016748 3.1e-89 332.4 211 75.8
BcaB02g06560 Brassica carinata HOM05D004342 ORTHO05D011040 9.0e-89 330.9 270 63.3
C07p03020 Brassica napus HOM05D004342 ORTHO05D042740 5.9e-88 328.2 264 64.0
A02p29080 Brassica napus HOM05D004342 ORTHO05D042860 7.6e-88 327.8 262 66.4
BolC5t33355H Brassica oleracea HOM05D004342 ORTHO05D016748 3.8e-87 325.5 210 74.8
C05p46270 Brassica napus HOM05D004342 ORTHO05D016748 6.5e-87 324.7 213 74.2
BcaC08g47011 Brassica carinata HOM05D004342 ORTHO05D011040 4.2e-86 322.0 263 61.2
BcaB07g33971 Brassica carinata HOM05D004342 ORTHO05D011040 3.9e-84 315.5 255 63.9
BcaB04g18145 Brassica carinata HOM05D004342 ORTHO05D011040 1.7e-79 300.1 263 59.7
BolC3t21133H Brassica oleracea HOM05D004342 ORTHO05D016748 3.8e-79 298.9 202 73.8
BolC5t32015H Brassica oleracea HOM05D004342 ORTHO05D041540 2.5e-78 296.2 264 59.5
C05p32840 Brassica napus HOM05D004342 ORTHO05D041540 5.5e-78 295.0 264 59.5
C04p30590 Brassica napus HOM05D004342 ORTHO05D097110 9.4e-70 267.7 223 62.8
BcaC01g01958 Brassica carinata HOM05D004342 ORTHO05D090434 1.6e-69 266.9 139 92.1
BolC5t32487H Brassica oleracea HOM05D004342 ORTHO05D016748 1.4e-68 263.8 151 86.1
C03p68080 Brassica napus HOM05D004342 ORTHO05D042288 2.4e-65 253.1 261 53.3
BolC3t19031H Brassica oleracea HOM05D004342 ORTHO05D042288 2.4e-65 253.1 261 53.3
BraA09t39012Z Brassica rapa HOM05D004342 ORTHO05D041860 9.1e-65 251.1 204 63.7
A09p34820 Brassica napus HOM05D004342 ORTHO05D041860 5.0e-63 245.4 204 62.7
BolC8t49973H Brassica oleracea HOM05D004342 ORTHO05D042841 1.2e-61 240.7 210 59.0
C03p64680 Brassica napus HOM05D004342 ORTHO05D040895 2.1e-61 240.0 211 58.3
BcaB06g27861 Brassica carinata HOM05D004342 ORTHO05D011040 6.1e-61 238.4 194 64.9
A10p08140 Brassica napus HOM05D004342 ORTHO05D014936 6.1e-61 238.4 150 80.7
BolC2t09984H Brassica oleracea HOM05D004342 ORTHO05D107287 1.4e-60 237.3 282 51.4
BraSC35t45984Z Brassica rapa HOM05D004342 ORTHO05D014936 2.3e-60 236.5 150 79.3
BolC2t09619H Brassica oleracea HOM05D004342 ORTHO05D033291 4.4e-59 232.3 264 50.8
BcaB02g11238 Brassica carinata HOM05D004342 ORTHO05D011040 9.7e-59 231.1 144 75.7
BcaB05g23199 Brassica carinata HOM05D004342 ORTHO05D011040 2.2e-58 229.9 210 59.5
A04p03900 Brassica napus HOM05D004342 ORTHO05D018601 2.8e-58 229.6 128 88.3
BcaC08g44285 Brassica carinata HOM05D004342 ORTHO05D016748 3.7e-58 229.2 151 75.5
A01p25070 Brassica napus HOM05D004342 ORTHO05D011040 8.2e-58 228.0 263 52.5
C08p23450 Brassica napus HOM05D004342 ORTHO05D042841 9.1e-57 224.6 257 48.6
A06p23950 Brassica napus HOM05D004342 ORTHO05D013036 1.2e-56 224.2 169 64.5
A10p05900 Brassica napus HOM05D004342 ORTHO05D013036 1.6e-56 223.8 171 63.2
A05p24900 Brassica napus HOM05D004342 ORTHO05D013036 1.0e-55 221.1 169 63.3
A06p24190 Brassica napus HOM05D004342 ORTHO05D013036 1.0e-55 221.1 169 63.3
C02p36040 Brassica napus HOM05D004342 ORTHO05D033291 1.0e-55 221.1 264 48.9
A05p21050 Brassica napus HOM05D004342 ORTHO05D013036 1.3e-55 220.7 168 63.7
BraA04t16568Z Brassica rapa HOM05D004342 ORTHO05D013036 1.7e-55 220.3 170 62.9
BcaC01g01112 Brassica carinata HOM05D004342 ORTHO05D016748 1.5e-54 217.2 147 74.1
C08p05970 Brassica napus HOM05D004342 ORTHO05D098872 1.5e-54 217.2 184 63.6
A02p33870 Brassica napus HOM05D004342 ORTHO05D013036 2.5e-54 216.5 169 62.1
BolC3t18726H Brassica oleracea HOM05D004342 ORTHO05D040895 7.2e-54 214.9 209 53.6
BcaB02g07288 Brassica carinata HOM05D004342 ORTHO05D016748 2.7e-53 213.0 150 72.0
BcaB06g27355 Brassica carinata HOM05D004342 ORTHO05D011040 3.6e-53 212.6 265 46.4
A06p14130 Brassica napus HOM05D004342 ORTHO05D013036 2.3e-52 209.9 169 60.9
C02p39690 Brassica napus HOM05D004342 ORTHO05D014936 5.2e-52 208.8 122 86.1
C06p19750 Brassica napus HOM05D003441 ORTHO05D004516 5.2e-52 208.8 214 55.1
C02p36010 Brassica napus HOM05D004342 ORTHO05D033291 6.8e-52 208.4 252 48.4
C03p88250 Brassica napus HOM05D004342 ORTHO05D018601 1.5e-51 207.2 132 73.5
C07p14140 Brassica napus HOM05D004342 ORTHO05D014936 2.0e-51 206.8 122 84.4
BolC7t41910H Brassica oleracea HOM05D004342 ORTHO05D014936 4.4e-51 205.7 122 85.2
BcaB07g33403 Brassica carinata HOM05D004342 ORTHO05D093493 4.1e-49 199.1 145 71.7
BcaB01g02523 Brassica carinata HOM05D004342 ORTHO05D016748 3.5e-48 196.1 150 66.7
A03p66330 Brassica napus HOM05D000062 ORTHO05D000043 5.9e-48 195.3 140 67.9
BolC2t08690H Brassica oleracea HOM05D004342 ORTHO05D040487 3.8e-47 192.6 261 46.7
C02p26240 Brassica napus HOM05D004342 ORTHO05D040487 4.2e-46 189.1 261 45.6
BraA10t42852Z Brassica rapa HOM05D004342 ORTHO05D013036 7.2e-46 188.3 150 62.0
BraA10t43034Z Brassica rapa HOM05D004342 ORTHO05D013036 3.6e-45 186.0 150 61.3
BraA01t02499Z Brassica rapa HOM05D004342 ORTHO05D013036 6.1e-45 185.3 150 60.0
BcaB04g18376 Brassica carinata HOM05D004342 ORTHO05D018601 1.0e-44 184.5 126 72.2
BraA06t25485Z Brassica rapa HOM05D004342 ORTHO05D013036 1.4e-44 184.1 150 60.0
BcaB01g01175 Brassica carinata HOM05D004342 ORTHO05D018601 6.8e-44 181.8 138 65.2
C07p09210 Brassica napus HOM05D004342 ORTHO05D014936 1.2e-43 181.0 122 73.0
BolC7t41332H Brassica oleracea HOM05D004342 ORTHO05D014936 1.2e-43 181.0 122 73.0
BraA02t08405Z Brassica rapa HOM05D004342 ORTHO05D013036 1.5e-43 180.6 150 59.3
C03p67290 Brassica napus HOM05D004342 ORTHO05D033138 7.5e-43 178.3 203 51.2
BolSC21t60296H Brassica oleracea HOM05D004342 ORTHO05D033138 7.5e-43 178.3 203 51.2
BraA06t24546Z Brassica rapa HOM05D004342 ORTHO05D013036 1.3e-42 177.6 150 58.7
BolC8t47411H Brassica oleracea HOM05D004342 ORTHO05D106550 2.8e-42 176.4 117 74.4
C05p42390 Brassica napus HOM05D004342 ORTHO05D041824 3.1e-41 172.9 140 62.9
BolC5t32968H Brassica oleracea HOM05D004342 ORTHO05D041824 3.1e-41 172.9 140 62.9
A01p28260 Brassica napus HOM05D004342 ORTHO05D014936 3.8e-39 166.0 104 76.0
A07p06040 Brassica napus HOM05D004342 ORTHO05D101341 3.3e-38 162.9 168 53.0
BcaB08g34712 Brassica carinata HOM05D004342 ORTHO05D011040 3.6e-37 159.5 263 38.4
C02p40210 Brassica napus HOM05D004342 ORTHO05D018674 1.0e-36 157.9 113 69.0
BraSC35t45983Z Brassica rapa HOM05D004342 ORTHO05D018674 1.8e-36 157.1 86 88.4
A01p27340 Brassica napus HOM05D004342 ORTHO05D028050 2.3e-36 156.8 169 50.9
BraA01t02874Z Brassica rapa HOM05D004342 ORTHO05D028050 2.3e-36 156.8 169 50.9
A03p64730 Brassica napus HOM05D004342 ORTHO05D013036 8.9e-36 154.8 119 62.2
C02p40200 Brassica napus HOM05D004342 ORTHO05D014936 7.5e-35 151.8 122 63.9
A07p06290 Brassica napus HOM05D004342 ORTHO05D099060 3.2e-33 146.4 120 60.8
C02p39700 Brassica napus HOM05D004342 ORTHO05D099964 7.0e-33 145.2 122 65.6
BcaB04g17938 Brassica carinata HOM05D004342 ORTHO05D011040 9.2e-33 144.8 101 65.3
BraA07t27945Z Brassica rapa HOM05D004342 ORTHO05D014936 2.0e-32 143.7 104 68.3
C01p35180 Brassica napus HOM05D004342 ORTHO05D028050 5.9e-32 142.1 113 64.6
BolC1t03477H Brassica oleracea HOM05D004342 ORTHO05D028050 5.9e-32 142.1 113 64.6
A06p19230 Brassica napus HOM05D004342 ORTHO05D018601 2.3e-31 140.2 132 54.5
BcaB07g33226 Brassica carinata HOM05D004342 ORTHO05D014936 8.0e-29 131.7 102 63.7
BraA03t15693Z Brassica rapa HOM05D004342 ORTHO05D027051 1.0e-28 131.3 83 75.9
BcaC07g39329 Brassica carinata HOM05D004342 ORTHO05D018601 1.4e-28 131.0 85 70.6
A10p08150 Brassica napus HOM05D004342 ORTHO05D018674 1.4e-28 131.0 67 91.0
BolC6t36414H Brassica oleracea HOM05D004342 ORTHO05D042454 5.2e-28 129.0 261 35.2
C07p09200 Brassica napus HOM05D004342 ORTHO05D096449 1.2e-27 127.9 82 74.4
BcaC06g36550 Brassica carinata HOM05D004342 ORTHO05D018601 8.3e-26 121.7 86 65.1
BolC2t10046H Brassica oleracea HOM05D004342 ORTHO05D018674 2.0e-24 117.1 106 59.4
BolC6t39191H Brassica oleracea HOM05D004342 ORTHO05D041978 1.7e-23 114.0 99 57.6
A06p35820 Brassica napus HOM05D004342 ORTHO05D013036 8.6e-23 111.7 94 61.7
BcaB08g35573 Brassica carinata HOM05D004342 ORTHO05D018674 5.6e-22 109.0 73 67.1
A03p66340 Brassica napus HOM05D004342 ORTHO05D018674 5.6e-22 109.0 71 73.2
BraA03t15692Z Brassica rapa HOM05D004342 ORTHO05D018674 5.6e-22 109.0 71 73.2
BolC7t41081H Brassica oleracea HOM05D004342 ORTHO05D042200 9.5e-22 108.2 144 45.1
C07p06590 Brassica napus HOM05D004342 ORTHO05D042200 3.6e-21 106.3 144 45.1
BraA05t21009Z Brassica rapa HOM05D004342 ORTHO05D013036 3.6e-21 106.3 100 56.0
C01p33380 Brassica napus HOM05D004342 ORTHO05D101940 6.2e-21 105.5 90 61.1
BcaB06g27423 Brassica carinata HOM05D004342 ORTHO05D027051 1.4e-20 104.4 61 78.7
BraA07t28391Z Brassica rapa HOM05D004342 ORTHO05D014936 1.4e-20 104.4 87 63.2
C06p12600 Brassica napus HOM05D004342 ORTHO05D042454 2.3e-20 103.6 261 31.0
BraA03t15562Z Brassica rapa HOM05D004342 ORTHO05D014936 5.2e-20 102.4 77 72.7
BraA06t25909Z Brassica rapa HOM05D004342 ORTHO05D013036 8.9e-20 101.7 95 55.8
BcaC03g16937 Brassica carinata HOM05D004342 ORTHO05D027051 7.5e-19 98.6 61 77.0
BcaC06g35994 Brassica carinata HOM05D004342 ORTHO05D027051 1.9e-17 94.0 58 75.9
C06p42390 Brassica napus HOM05D004342 ORTHO05D041978 1.0e-15 88.2 75 57.3
BcaB02g10428 Brassica carinata HOM05D004342 ORTHO05D018674 3.0e-15 86.7 50 78.0
BraA06t25627Z Brassica rapa HOM05D004342 ORTHO05D107595 1.1e-14 84.7 73 57.5
BraA06t25007Z Brassica rapa HOM05D004342 ORTHO05D018601 1.5e-14 84.3 89 50.6
BraA06t26508Z Brassica rapa HOM05D004342 ORTHO05D013036 3.1e-12 76.6 75 56.0
BraA07t27946Z Brassica rapa HOM05D004342 ORTHO05D108557 4.4e-11 72.8 49 67.3
BraA06t25628Z Brassica rapa HOM05D004342 ORTHO05D033138 5.4e-09 65.9 114 41.2
BolC3t21022H Brassica oleracea HOM05D004342 ORTHO05D041047 3.5e-08 63.2 73 47.9
BcaB07g33404 Brassica carinata HOM05D004342 ORTHO05D095904 1.0e-07 61.6 45 64.4
AT1G52950 Arabidopsis thaliana HOM05D000353 ORTHO05D000174 1.5e-06 57.8 249 23.3
TAR063G0004 Trochodendron aralioides HOM05D000824 ORTHO05D010357 1.5e-06 57.8 124 27.4
TAR091G0002 Trochodendron aralioides HOM05D000824 ORTHO05D000001 1.9e-06 57.4 124 26.6
BolC5t33456H Brassica oleracea HOM05D004342 ORTHO05D042428 7.3e-06 55.5 120 33.3


User provided reference genes

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