Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g19230 Brassica carinata HOM05D000046 ORTHO05D014106 3.6e-61 238.0 118 100.0
BolC9t59371H Brassica oleracea HOM05D000046 ORTHO05D014106 8.6e-31 137.1 88 79.5
C09p65470 Brassica napus HOM05D000046 ORTHO05D014106 1.5e-30 136.3 87 80.5
BraA10t44692Z Brassica rapa HOM05D000046 ORTHO05D014106 1.9e-30 136.0 88 79.5
BcaC04g19231 Brassica carinata HOM05D000046 ORTHO05D014106 3.3e-30 135.2 87 79.3
A10p26340 Brassica napus HOM05D000046 ORTHO05D014106 3.3e-30 135.2 87 80.5
BcaB08g37063 Brassica carinata HOM05D000046 ORTHO05D014106 1.4e-25 119.8 69 87.0
BcaB08g37064 Brassica carinata HOM05D000046 ORTHO05D014106 9.3e-25 117.1 75 78.7
C09p65480 Brassica napus HOM05D000046 ORTHO05D014106 1.6e-24 116.3 68 83.8
BcaC04g19233 Brassica carinata HOM05D000046 ORTHO05D014106 2.7e-24 115.5 67 85.1
C09p64830 Brassica napus HOM05D000046 ORTHO05D014106 3.0e-23 112.1 75 78.7
BolC9t59314H Brassica oleracea HOM05D000046 ORTHO05D014106 3.3e-22 108.6 74 78.4
Sp6g32190 Schrenkiella parvula HOM05D000046 ORTHO05D012590 9.3e-17 90.5 76 59.2
BolC2t06457H Brassica oleracea HOM05D000046 ORTHO05D019873 1.6e-16 89.7 76 63.2
BcaNung01925 Brassica carinata HOM05D000046 ORTHO05D019873 3.5e-16 88.6 92 55.4
C02p05020 Brassica napus HOM05D000046 ORTHO05D019873 6.7e-15 84.3 66 68.2
BcaC04g19232 Brassica carinata HOM05D000046 ORTHO05D019852 3.3e-14 82.0 77 58.4
BolC9t59372H Brassica oleracea HOM05D000046 ORTHO05D014106 3.3e-14 82.0 103 50.5
C02p11240 Brassica napus HOM05D000046 ORTHO05D019873 7.4e-14 80.9 73 60.3
CARHR201890 Cardamine hirsuta HOM05D000046 ORTHO05D012590 8.1e-13 77.4 76 57.9
AL6G22040 Arabidopsis lyrata HOM05D000046 ORTHO05D012590 1.8e-12 76.3 77 58.4
C03p53750 Brassica napus HOM05D000046 ORTHO05D020013 9.9e-11 70.5 70 55.7
BolC3t17635H Brassica oleracea HOM05D000046 ORTHO05D020013 9.9e-11 70.5 70 55.7
Thhalv10014040m.g Eutrema salsugineum HOM05D000046 ORTHO05D012590 9.9e-11 70.5 66 59.1
BcaC01g03315 Brassica carinata HOM05D000046 ORTHO05D020013 1.7e-10 69.7 70 55.7
A10p26350 Brassica napus HOM05D000046 ORTHO05D019852 1.7e-10 69.7 98 49.0
BcaC04g19234 Brassica carinata HOM05D000046 ORTHO05D019852 6.4e-10 67.8 97 48.5
C09p65490 Brassica napus HOM05D000046 ORTHO05D019852 6.4e-10 67.8 97 48.5
BcaB03g14586 Brassica carinata HOM05D000046 ORTHO05D020013 8.4e-10 67.4 74 58.1
Carub.0006s0984 Capsella rubella HOM05D000046 ORTHO05D012590 1.1e-09 67.0 80 50.0
CARHR201860 Cardamine hirsuta HOM05D000046 ORTHO05D012590 1.9e-09 66.2 76 50.0
BcaB08g37065 Brassica carinata HOM05D000046 ORTHO05D019852 2.4e-09 65.9 71 53.5
BcaB01g05485 Brassica carinata HOM05D000046 ORTHO05D012590 4.2e-09 65.1 87 40.2
A03p43640 Brassica napus HOM05D000046 ORTHO05D020013 7.1e-09 64.3 70 51.4
AT5G11360 Arabidopsis thaliana HOM05D000046 ORTHO05D012590 3.5e-08 62.0 77 45.5
Thhalv10002608m.g Eutrema salsugineum HOM05D000046 ORTHO05D020013 3.5e-08 62.0 67 56.7
AL6G22050 Arabidopsis lyrata HOM05D000046 ORTHO05D012590 1.0e-07 60.5 75 41.3
BraA03t13501Z Brassica rapa HOM05D000046 ORTHO05D020013 1.3e-07 60.1 69 49.3
A03p04990 Brassica napus HOM05D000046 ORTHO05D012590 3.0e-07 58.9 76 42.1
AL6G22010 Arabidopsis lyrata HOM05D000046 ORTHO05D012590 3.9e-07 58.5 82 42.7
Thhalv10015862m.g Eutrema salsugineum HOM05D000046 ORTHO05D019873 3.9e-07 58.5 50 60.0
AT5G11400 Arabidopsis thaliana HOM05D000046 ORTHO05D012590 6.7e-07 57.8 61 57.4
C03p05730 Brassica napus HOM05D000046 ORTHO05D012590 1.9e-06 56.2 74 41.9
BolC3t13086H Brassica oleracea HOM05D000046 ORTHO05D012590 1.9e-06 56.2 74 41.9
BraA03t09835Z Brassica rapa HOM05D000046 ORTHO05D012590 1.9e-06 56.2 74 41.9
Carub.0006s0985 Capsella rubella HOM05D000046 ORTHO05D012590 3.3e-06 55.5 78 41.0


User provided reference genes

Program Settings