Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g19118 Brassica carinata HOM05D002468 ORTHO05D005371 2.8e-272 941.4 496 100.0
BraA10t44546Z Brassica rapa HOM05D002468 ORTHO05D005371 3.7e-232 808.1 439 96.1
A10p24820 Brassica napus HOM05D002468 ORTHO05D005371 1.1e-231 806.6 439 95.4
C09p63670 Brassica napus HOM05D002468 ORTHO05D005371 9.0e-231 803.5 439 95.4
BolC9t59208H Brassica oleracea HOM05D002468 ORTHO05D005371 9.0e-231 803.5 439 95.4
C02p06130 Brassica napus HOM05D002468 ORTHO05D005371 1.4e-228 796.2 439 95.7
BolC2t06554H Brassica oleracea HOM05D002468 ORTHO05D005371 1.4e-228 796.2 439 95.7
Sp6g30600 Schrenkiella parvula HOM05D002468 ORTHO05D005371 6.1e-227 790.8 441 96.4
Thhalv10013572m.g Eutrema salsugineum HOM05D002468 ORTHO05D005371 2.3e-226 788.9 439 93.6
A02p01910 Brassica napus HOM05D002468 ORTHO05D005371 1.7e-221 772.7 439 93.4
BraA02t05164Z Brassica rapa HOM05D002468 ORTHO05D005371 1.7e-221 772.7 439 93.4
A03p05960 Brassica napus HOM05D002468 ORTHO05D005371 2.5e-220 768.8 439 91.1
BraA03t09933Z Brassica rapa HOM05D002468 ORTHO05D005371 9.4e-220 766.9 439 90.7
C03p07000 Brassica napus HOM05D002468 ORTHO05D005371 5.1e-218 761.1 439 90.2
BolC3t13199H Brassica oleracea HOM05D002468 ORTHO05D005371 5.1e-218 761.1 439 90.2
AL6G24040 Arabidopsis lyrata HOM05D002468 ORTHO05D005371 2.5e-217 758.8 439 91.3
Carub.0006s1158 Capsella rubella HOM05D002468 ORTHO05D005371 2.5e-217 758.8 441 90.2
AT5G13420 Arabidopsis thaliana HOM05D002468 ORTHO05D005371 4.3e-217 758.1 439 90.9
CARHR200010 Cardamine hirsuta HOM05D002468 ORTHO05D005371 3.8e-213 745.0 439 89.3
THA.LOC104807252 Tarenaya hassleriana HOM05D002468 ORTHO05D005371 2.1e-203 712.6 443 85.3
BcaB01g05361 Brassica carinata HOM05D002468 ORTHO05D005371 1.8e-202 709.5 439 85.6
Atru.chr12.1428 Acer truncatum HOM05D002468 ORTHO05D005371 8.5e-197 690.6 442 80.8
Gohir.A04G101700 Gossypium hirsutum HOM05D002468 ORTHO05D005371 1.1e-196 690.3 438 82.6
Aa31LG3G14290 Aethionema arabicum HOM05D002468 ORTHO05D005371 2.5e-196 689.1 517 75.4
Gohir.D04G140900 Gossypium hirsutum HOM05D002468 ORTHO05D005371 4.2e-196 688.3 439 82.5
Gorai.012G125900 Gossypium raimondii HOM05D002468 ORTHO05D005371 7.2e-196 687.6 439 82.2
Thecc.02G191400 Theobroma cacao HOM05D002468 ORTHO05D005371 9.4e-196 687.2 443 81.0
Manes.08G100600 Manihot esculenta HOM05D002468 ORTHO05D005371 2.3e-194 682.6 442 80.3
Eucgr.G01978 Eucalyptus grandis HOM05D002468 ORTHO05D005371 4.0e-194 681.8 444 80.2
Cpa.g.sc38.67 Carica papaya HOM05D002468 ORTHO05D005371 8.8e-194 680.6 445 80.9
MD16G1141700 Malus domestica HOM05D002468 ORTHO05D005371 1.2e-193 680.2 444 80.9
Duzib132G1053 Durio zibethinus HOM05D002468 ORTHO05D005371 1.5e-193 679.9 443 80.1
Ciclev10004979m.g Citrus clementina HOM05D002468 ORTHO05D005371 2.0e-193 679.5 443 79.7
Potri.001G068200 Populus trichocarpa HOM05D002468 ORTHO05D005371 7.5e-193 677.6 442 80.3
PGR119G1329 Punica granatum HOM05D002468 ORTHO05D005371 1.7e-192 676.4 443 80.1
Duzib052G0101 Durio zibethinus HOM05D002468 ORTHO05D005371 2.8e-192 675.6 443 79.5
MD13G1131400 Malus domestica HOM05D002468 ORTHO05D005371 4.8e-192 674.9 445 80.0
Sabra03G0117600 Salix brachista HOM05D002468 ORTHO05D005371 4.8e-192 674.9 441 80.0
Manes.09G188600 Manihot esculenta HOM05D002468 ORTHO05D005371 6.3e-192 674.5 441 79.6
Prupe.1G214200 Prunus persica HOM05D002468 ORTHO05D005371 1.8e-191 672.9 443 79.7
BcaNung01156 Brassica carinata HOM05D002468 ORTHO05D005371 3.1e-191 672.2 390 92.6
CsaV3_4G002210 Cucumis sativus L. HOM05D002468 ORTHO05D005371 3.1e-191 672.2 443 80.8
Actinidia30583 Actinidia chinensis HOM05D002468 ORTHO05D005371 1.2e-190 670.2 441 80.5
ClCG07G011940 Citrullus lanatus HOM05D002468 ORTHO05D005371 1.2e-190 670.2 447 80.1
QL03p049039 Quercus lobata HOM05D002468 ORTHO05D005371 2.0e-190 669.5 443 79.0
TAR629G1443 Trochodendron aralioides HOM05D002468 ORTHO05D005371 2.0e-190 669.5 442 79.4
TWI36G1422 Tripterygium wilfordii HOM05D002468 ORTHO05D005371 2.7e-190 669.1 446 78.9
Rhsim12G0017100 Rhododendron simsii HOM05D002468 ORTHO05D005371 5.9e-190 667.9 444 80.0
arahy.Tifrunner.gnm1.ann1.PCZ0HW Arachis hypogaea HOM05D002468 ORTHO05D005371 1.7e-189 666.4 439 78.1
arahy.Tifrunner.gnm1.ann1.S6Z2J3 Arachis hypogaea HOM05D002468 ORTHO05D005371 1.7e-189 666.4 439 78.1
CiPaw.06G109900 Carya illinoinensis HOM05D002468 ORTHO05D005371 1.7e-189 666.4 448 79.0
FvH4_4g22560 Fragaria vesca HOM05D002468 ORTHO05D005371 1.7e-189 666.4 445 79.1
AUR62028839 Chenopodium quinoa HOM05D002468 ORTHO05D005371 3.8e-189 665.2 399 84.5
TWI18G0725 Tripterygium wilfordii HOM05D002468 ORTHO05D005371 3.8e-189 665.2 447 78.7
FAN07G2580 Fragaria x ananassa HOM05D002468 ORTHO05D005371 5.0e-189 664.8 445 78.7
CANSAT01G0579 Cannabis sativa HOM05D002468 ORTHO05D005371 6.5e-189 664.5 447 78.5
AUR62005716 Chenopodium quinoa HOM05D002468 ORTHO05D005371 8.5e-189 664.1 399 84.2
Cfa009455 Carpinus fangiana HOM05D002468 ORTHO05D005371 1.5e-188 663.3 443 79.0
MELO3C017817.2 Cucumis melo HOM05D002468 ORTHO05D005371 1.5e-188 663.3 447 79.2
Sed0000476 Sechium edule HOM05D002468 ORTHO05D005371 2.5e-188 662.5 442 79.6
FAN17G0051 Fragaria x ananassa HOM05D002468 ORTHO05D005371 3.2e-188 662.1 442 79.2
CSS0032961 Camellia sinensis var. sinensis HOM05D002468 ORTHO05D005371 5.5e-188 661.4 448 79.2
CiPaw.05G100700 Carya illinoinensis HOM05D002468 ORTHO05D005371 5.5e-188 661.4 440 78.6
RcHm_v2.0_Chr4g0428801 Rosa chinensis HOM05D002468 ORTHO05D005371 5.5e-188 661.4 445 78.0
Sed0003563 Sechium edule HOM05D002468 ORTHO05D005371 5.5e-188 661.4 439 79.7
Aqoxy5G03074 Aquilegia oxysepala HOM05D002468 ORTHO05D005371 7.2e-188 661.0 442 78.1
CSS0030444 Camellia sinensis var. sinensis HOM05D002468 ORTHO05D005371 7.2e-188 661.0 448 79.2
FAN12G2192 Fragaria x ananassa HOM05D002468 ORTHO05D005371 7.2e-188 661.0 437 79.4
HanXRQChr17g0540381 Helianthus annuus HOM05D002468 ORTHO05D005371 7.2e-188 661.0 442 79.0
Hund14581 Selenicereus undatus HOM05D002468 ORTHO05D005371 7.2e-188 661.0 442 77.8
Phvul.008G003600 Phaseolus vulgaris HOM05D002468 ORTHO05D005371 2.1e-187 659.4 443 77.7
VMungo1383G1406 Vigna mungo HOM05D002468 ORTHO05D005371 2.1e-187 659.4 443 77.4
GSVIVG01001098001 Vitis vinifera HOM05D002468 ORTHO05D005371 2.7e-187 659.1 443 77.9
Ah.03g135540 Amaranthus hybridus HOM05D002468 ORTHO05D005371 6.1e-187 657.9 441 77.8
ECA246G0169 Erigeron canadensis HOM05D002468 ORTHO05D005371 6.1e-187 657.9 397 84.6
Oeu010257.1 Olea europaea HOM05D002468 ORTHO05D005371 6.1e-187 657.9 413 81.8
Glyma.08G362900 Glycine max HOM05D002468 ORTHO05D005371 8.0e-187 657.5 439 77.7
TAR371G0123 Trochodendron aralioides HOM05D002468 ORTHO05D005371 1.8e-186 656.4 414 81.6
Sc11g0000080 Simmondsia chinensis HOM05D002468 ORTHO05D005371 3.0e-186 655.6 413 82.1
Lsat_1_v5_gn_3_32661 Lactuca sativa HOM05D002468 ORTHO05D005371 4.0e-186 655.2 454 76.4
Peaxi162Scf00842g00319 Petunia axillaris HOM05D002468 ORTHO05D005371 5.2e-186 654.8 444 78.2
Dinv17539 Davidia involucrata HOM05D002468 ORTHO05D005371 1.2e-185 653.7 442 78.1
MSTRG.449 Avicennia marina HOM05D002468 ORTHO05D005371 2.6e-185 652.5 443 77.7
PSO017G4233 Papaver somniferum HOM05D002468 ORTHO05D005371 3.4e-185 652.1 440 78.9
Cc11_g14960 Coffea canephora HOM05D002468 ORTHO05D005371 4.4e-185 651.7 445 78.4
CAN.G624.1 Capsicum annuum HOM05D002468 ORTHO05D005371 7.5e-185 651.0 441 76.6
PGSC0003DMG402028027 Solanum tuberosum HOM05D002468 ORTHO05D005371 7.5e-185 651.0 417 80.8
EL10Ac6g13612 Beta vulgaris HOM05D002468 ORTHO05D005371 9.8e-185 650.6 439 77.7
Dinv03336 Davidia involucrata HOM05D002468 ORTHO05D005371 9.8e-185 650.6 439 78.8
vmacro01017 Vaccinium macrocarpon HOM05D002468 ORTHO05D005371 3.7e-184 648.7 471 74.3
Glyma.18G299100 Glycine max HOM05D002468 ORTHO05D005371 6.3e-184 647.9 439 76.8
HanXRQChr06g0175161 Helianthus annuus HOM05D002468 ORTHO05D005371 1.1e-183 647.1 441 76.2
PSO478G3355 Papaver somniferum HOM05D002468 ORTHO05D005371 1.4e-183 646.7 439 77.9
MSTRG.8058 Avicennia marina HOM05D002468 ORTHO05D005371 1.8e-183 646.4 443 77.0
MBI07_g35982_MAGBIO Magnolia biondii HOM05D002468 ORTHO05D005371 1.8e-183 646.4 440 76.6
Ca_04094_v3 Cicer arietinum L. HOM05D002468 ORTHO05D005371 3.1e-183 645.6 402 81.3
Solyc11g033288.1 Solanum lycopersicum HOM05D002468 ORTHO05D005371 3.1e-183 645.6 417 80.6
Sopen11g017140 Solanum pennellii HOM05D002468 ORTHO05D005371 3.1e-183 645.6 417 80.6
Lj1g0025256 Lotus japonicus HOM05D002468 ORTHO05D005371 5.4e-183 644.8 440 75.5
DCAR_024636 Daucus carota HOM05D002468 ORTHO05D005371 3.5e-182 642.1 399 83.5
SalBow2G0960 Salvia bowleyana HOM05D002468 ORTHO05D005371 3.5e-182 642.1 398 83.2
TPR.G9718 Trifolium pratense HOM05D002468 ORTHO05D005371 1.0e-181 640.6 404 80.0
Lalb_Chr04g0257301 Lupinus albus HOM05D002468 ORTHO05D005371 5.0e-181 638.3 446 74.7
Medtr7g006560 Medicago truncatula HOM05D002468 ORTHO05D005371 1.5e-180 636.7 408 79.7
Psat3g207000 Pisum sativum HOM05D002468 ORTHO05D005371 3.6e-179 632.1 406 79.3
Os01g0926300 Oryza sativa ssp. japonica HOM05D002468 ORTHO05D005371 4.0e-178 628.6 381 82.9
Haze_12509 Corylus avellana HOM05D002468 ORTHO05D005371 3.7e-176 622.1 416 78.6
Migut.K01049 Erythranthe guttata HOM05D002468 ORTHO05D005371 3.7e-176 622.1 443 75.6
unitig_8.g2893 Utricularia gibba HOM05D002468 ORTHO05D005371 1.1e-175 620.5 377 83.8
Zm00001eb363880 Zea mays HOM05D002468 ORTHO05D005371 7.0e-175 617.8 385 80.5
SGA_v2.0_scaffold258G45768 Striga asiatica HOM05D002468 ORTHO05D005371 1.2e-174 617.1 402 79.1
Zm00001eb142730 Zea mays HOM05D002468 ORTHO05D005371 1.6e-174 616.7 382 81.2
HPP92_009801 Vanilla planifolia HOM05D002468 ORTHO05D005371 4.6e-174 615.1 419 76.4
MBI07_g48060_MAGBIO Magnolia biondii HOM05D002468 ORTHO05D005371 7.8e-174 614.4 483 69.2
HanXRQChr06g0175171 Helianthus annuus HOM05D002468 ORTHO05D005371 1.6e-171 606.7 383 79.4
ATR0582G307 Amborella trichopoda HOM05D002468 ORTHO05D005371 3.6e-171 605.5 387 78.8
CDE05G3080 Ceratophyllum demersum HOM05D002468 ORTHO05D005371 1.4e-170 603.6 408 74.8
CSS0032033 Camellia sinensis var. sinensis HOM05D002468 ORTHO05D005371 4.0e-170 602.1 388 80.9
CDE05G2158 Ceratophyllum demersum HOM05D002468 ORTHO05D005371 1.1e-167 594.0 397 75.3
Nitab4.5_0004349g0040 Nicotiana tabacum HOM05D002468 ORTHO05D005371 1.3e-165 587.0 443 72.9
Actinidia22113 Actinidia chinensis HOM05D002468 ORTHO05D005371 3.3e-164 582.4 380 81.3
Nitab4.5_0002569g0040 Nicotiana tabacum HOM05D002468 ORTHO05D005371 1.4e-154 550.4 445 68.5
Potri.003G161900 Populus trichocarpa HOM05D002468 ORTHO05D005371 4.0e-154 548.9 367 79.6
AagrBONN_evm.TU.Sc2ySwM_228.2334 Anthoceros agrestis HOM05D002468 ORTHO05D005371 4.3e-148 528.9 410 66.3
Lalb_Chr13g0296941 Lupinus albus HOM05D002468 ORTHO05D005371 2.1e-147 526.6 371 68.2
Lj4g0027400 Lotus japonicus HOM05D002468 ORTHO05D005371 4.7e-147 525.4 368 70.7
Lalb_Chr10g0091121 Lupinus albus HOM05D002468 ORTHO05D005371 2.6e-145 519.6 319 83.7
Lj6C840T10 Lonicera japonica HOM05D002468 ORTHO05D005371 4.9e-144 515.4 304 86.5
Glyma.05G199800 Glycine max HOM05D002468 ORTHO05D005371 4.6e-142 508.8 378 66.4
TPR.G12900 Trifolium pratense HOM05D002468 ORTHO05D005371 5.6e-140 501.9 417 63.3
Medtr8g096130 Medicago truncatula HOM05D002468 ORTHO05D005371 3.6e-139 499.2 384 66.1
Mapoly0092s0071 Marchantia polymorpha HOM05D002468 ORTHO05D005371 4.8e-139 498.8 413 62.7
Phvul.002G281000 Phaseolus vulgaris HOM05D002468 ORTHO05D005371 1.4e-138 497.3 362 67.1
Mapoly0092s0072 Marchantia polymorpha HOM05D002468 ORTHO05D005371 5.3e-138 495.4 377 66.3
SMO367G1271 Selaginella moellendorffii HOM05D002468 ORTHO05D005371 5.3e-138 495.4 361 70.4
Mapoly0092s0073 Marchantia polymorpha HOM05D002468 ORTHO05D005371 6.9e-138 495.0 377 66.3
VMungo0251G2964 Vigna mungo HOM05D002468 ORTHO05D001247 4.9e-136 488.8 362 65.7
Ca_16823_v3 Cicer arietinum L. HOM05D002468 ORTHO05D005371 1.1e-135 487.6 393 62.1
Pp3c26_4790 Physcomitrium patens HOM05D002468 ORTHO05D005371 2.1e-134 483.4 364 67.3
ClCG06G013000 Citrullus lanatus HOM05D002468 ORTHO05D005371 6.9e-130 468.4 380 60.0
SHI04110 Sapria himalayana HOM05D002468 ORTHO05D005371 8.4e-128 461.5 317 76.0
MELO3C017506.2 Cucumis melo HOM05D002468 ORTHO05D005371 1.2e-126 457.6 402 57.2
Cpa.g.sc2215.1 Carica papaya HOM05D002468 ORTHO05D005371 1.8e-125 453.8 359 63.0
CBR_g51451 Chara braunii HOM05D002468 ORTHO05D005371 5.7e-116 422.2 365 61.4
arahy.Tifrunner.gnm1.ann1.93S04R Arachis hypogaea HOM05D002468 ORTHO05D005371 2.9e-96 356.7 365 54.5
Eucgr.H00650 Eucalyptus grandis HOM05D002468 ORTHO05D005371 5.9e-89 332.4 302 58.9
Lj2g0022028 Lotus japonicus HOM05D002468 ORTHO05D005371 1.0e-80 305.1 216 71.3
BolC3t13348H Brassica oleracea HOM05D002468 ORTHO05D005371 5.7e-76 289.3 193 82.4
Mapoly0189s0003 Marchantia polymorpha HOM05D002468 ORTHO05D005371 1.8e-66 257.7 319 44.5
C03p08440 Brassica napus HOM05D002468 ORTHO05D005371 1.5e-63 248.1 145 90.3
arahy.Tifrunner.gnm1.ann1.1XR5VC Arachis hypogaea HOM05D002468 ORTHO05D005371 1.6e-57 228.0 189 61.9
HanXRQChr10g0304361 Helianthus annuus HOM05D002468 ORTHO05D005371 1.6e-57 228.0 125 85.6
Glyma.15G205533 Glycine max HOM05D002468 ORTHO05D005371 2.3e-53 214.2 154 69.5
BcaB01g05316 Brassica carinata HOM05D000877 ORTHO05D012137 6.8e-37 159.5 111 78.4
Glyma.08G007300 Glycine max HOM05D002468 ORTHO05D005371 1.2e-36 158.7 119 67.2
CsaV3_1G031170 Cucumis sativus L. HOM05D002468 ORTHO05D005371 4.4e-36 156.8 162 52.5
BolC3t13237H Brassica oleracea HOM05D000877 ORTHO05D012137 5.4e-34 149.8 81 92.6
Lalb_Chr10g0091111 Lupinus albus HOM05D002468 ORTHO05D005371 2.6e-28 131.0 81 77.8
SGA_v2.0_scaffold4G02418 Striga asiatica HOM05D002468 ORTHO05D051394 7.6e-28 129.4 117 56.4
CsaV3_1G031160 Cucumis sativus L. HOM05D002468 ORTHO05D005371 4.2e-26 123.6 80 71.2
SEGI_31132 Sequoiadendron giganteum HOM05D002468 ORTHO05D005371 1.1e-18 99.0 77 55.8
SGA_v2.0_scaffold528G52739 Striga asiatica HOM05D002468 ORTHO05D051394 5.4e-18 96.7 108 50.9
Pp3c3_15390 Physcomitrium patens HOM05D002468 ORTHO05D005371 4.8e-14 83.6 94 50.0
vmacro08874 Vaccinium macrocarpon HOM05D002468 ORTHO05D013153 1.1e-07 62.4 35 82.9


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